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Identification and analysis of TCR motifs specific to SARS-CoV-2 epitopes

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antigenomics/covid19-tcr-analysis

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TCR repertoire analysis for "SARS-CoV-2 epitopes are recognized by a public and diverse repertoire of human T-cell receptors"

  • See ifng_assay/ for analysis of Spike protein-stimulated T-cells: TCR repertoires of IFNg-producing CD4 and CD8 cells
  • See tetramer/ for analysis of A*02 Spike epitope tetramer-sorted T-cells

Results are provided in compiled R markdown notebooks (.html), plain text files, and individual PDF files for figures.

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Identification and analysis of TCR motifs specific to SARS-CoV-2 epitopes

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