Bump mypy from 1.11.2 to 1.13.0 in /pipeline/seq_retrieval

pipeline/seq_retrieval/pyproject.toml

@@ -19,7 +19,7 @@ dependencies = [
 test = [
     "flake8==7.1.*",
     "flake8-unused-arguments==0.0.*",
-    "mypy==1.11.*",
+    "mypy==1.13.*",
     "pytest==8.3.*",
     "pytest-cov==5.0.*"
 ]

pipeline/seq_retrieval/tests/requirements.txt

@@ -232,34 +232,39 @@ mccabe==0.7.0 \
     --hash=sha256:348e0240c33b60bbdf4e523192ef919f28cb2c3d7d5c7794f74009290f236325 \
     --hash=sha256:6c2d30ab6be0e4a46919781807b4f0d834ebdd6c6e3dca0bda5a15f863427b6e
     # via flake8
-mypy==1.11.2 \
-    --hash=sha256:06d26c277962f3fb50e13044674aa10553981ae514288cb7d0a738f495550b36 \
-    --hash=sha256:2ff93107f01968ed834f4256bc1fc4475e2fecf6c661260066a985b52741ddce \
-    --hash=sha256:36383a4fcbad95f2657642a07ba22ff797de26277158f1cc7bd234821468b1b6 \
-    --hash=sha256:37c7fa6121c1cdfcaac97ce3d3b5588e847aa79b580c1e922bb5d5d2902df19b \
-    --hash=sha256:3a66169b92452f72117e2da3a576087025449018afc2d8e9bfe5ffab865709ca \
-    --hash=sha256:3f14cd3d386ac4d05c5a39a51b84387403dadbd936e17cb35882134d4f8f0d24 \
-    --hash=sha256:41ea707d036a5307ac674ea172875f40c9d55c5394f888b168033177fce47383 \
-    --hash=sha256:478db5f5036817fe45adb7332d927daa62417159d49783041338921dcf646fc7 \
-    --hash=sha256:4a8a53bc3ffbd161b5b2a4fff2f0f1e23a33b0168f1c0778ec70e1a3d66deb86 \
-    --hash=sha256:539c570477a96a4e6fb718b8d5c3e0c0eba1f485df13f86d2970c91f0673148d \
-    --hash=sha256:57555a7715c0a34421013144a33d280e73c08df70f3a18a552938587ce9274f4 \
-    --hash=sha256:6e658bd2d20565ea86da7d91331b0eed6d2eee22dc031579e6297f3e12c758c8 \
-    --hash=sha256:6e7184632d89d677973a14d00ae4d03214c8bc301ceefcdaf5c474866814c987 \
-    --hash=sha256:75746e06d5fa1e91bfd5432448d00d34593b52e7e91a187d981d08d1f33d4385 \
-    --hash=sha256:7f9993ad3e0ffdc95c2a14b66dee63729f021968bff8ad911867579c65d13a79 \
-    --hash=sha256:801780c56d1cdb896eacd5619a83e427ce436d86a3bdf9112527f24a66618fef \
-    --hash=sha256:801ca29f43d5acce85f8e999b1e431fb479cb02d0e11deb7d2abb56bdaf24fd6 \
-    --hash=sha256:969ea3ef09617aff826885a22ece0ddef69d95852cdad2f60c8bb06bf1f71f70 \
-    --hash=sha256:a976775ab2256aadc6add633d44f100a2517d2388906ec4f13231fafbb0eccca \
-    --hash=sha256:af8d155170fcf87a2afb55b35dc1a0ac21df4431e7d96717621962e4b9192e70 \
-    --hash=sha256:b499bc07dbdcd3de92b0a8b29fdf592c111276f6a12fe29c30f6c417dd546d12 \
-    --hash=sha256:cd953f221ac1379050a8a646585a29574488974f79d8082cedef62744f0a0104 \
-    --hash=sha256:d42a6dd818ffce7be66cce644f1dff482f1d97c53ca70908dff0b9ddc120b77a \
-    --hash=sha256:e8960dbbbf36906c5c0b7f4fbf2f0c7ffb20f4898e6a879fcf56a41a08b0d318 \
-    --hash=sha256:edb91dded4df17eae4537668b23f0ff6baf3707683734b6a818d5b9d0c0c31a1 \
-    --hash=sha256:ee23de8530d99b6db0573c4ef4bd8f39a2a6f9b60655bf7a1357e585a3486f2b \
-    --hash=sha256:f7821776e5c4286b6a13138cc935e2e9b6fde05e081bdebf5cdb2bb97c9df81d
+mypy==1.13.0 \
+    --hash=sha256:0246bcb1b5de7f08f2826451abd947bf656945209b140d16ed317f65a17dc7dc \
+    --hash=sha256:0291a61b6fbf3e6673e3405cfcc0e7650bebc7939659fdca2702958038bd835e \
+    --hash=sha256:0730d1c6a2739d4511dc4253f8274cdd140c55c32dfb0a4cf8b7a43f40abfa6f \
+    --hash=sha256:07de989f89786f62b937851295ed62e51774722e5444a27cecca993fc3f9cd74 \
+    --hash=sha256:100fac22ce82925f676a734af0db922ecfea991e1d7ec0ceb1e115ebe501301a \
+    --hash=sha256:164f28cb9d6367439031f4c81e84d3ccaa1e19232d9d05d37cb0bd880d3f93c2 \
+    --hash=sha256:20c7ee0bc0d5a9595c46f38beb04201f2620065a93755704e141fcac9f59db2b \
+    --hash=sha256:3790ded76f0b34bc9c8ba4def8f919dd6a46db0f5a6610fb994fe8efdd447f73 \
+    --hash=sha256:39bb21c69a5d6342f4ce526e4584bc5c197fd20a60d14a8624d8743fffb9472e \
+    --hash=sha256:3ddb5b9bf82e05cc9a627e84707b528e5c7caaa1c55c69e175abb15a761cec2d \
+    --hash=sha256:3e38b980e5681f28f033f3be86b099a247b13c491f14bb8b1e1e134d23bb599d \
+    --hash=sha256:4bde84334fbe19bad704b3f5b78c4abd35ff1026f8ba72b29de70dda0916beb6 \
+    --hash=sha256:51f869f4b6b538229c1d1bcc1dd7d119817206e2bc54e8e374b3dfa202defcca \
+    --hash=sha256:581665e6f3a8a9078f28d5502f4c334c0c8d802ef55ea0e7276a6e409bc0d82d \
+    --hash=sha256:5c7051a3461ae84dfb5dd15eff5094640c61c5f22257c8b766794e6dd85e72d5 \
+    --hash=sha256:5d5092efb8516d08440e36626f0153b5006d4088c1d663d88bf79625af3d1d62 \
+    --hash=sha256:6607e0f1dd1fb7f0aca14d936d13fd19eba5e17e1cd2a14f808fa5f8f6d8f60a \
+    --hash=sha256:7029881ec6ffb8bc233a4fa364736789582c738217b133f1b55967115288a2bc \
+    --hash=sha256:7b2353a44d2179846a096e25691d54d59904559f4232519d420d64da6828a3a7 \
+    --hash=sha256:7bcb0bb7f42a978bb323a7c88f1081d1b5dee77ca86f4100735a6f541299d8fb \
+    --hash=sha256:7bfd8836970d33c2105562650656b6846149374dc8ed77d98424b40b09340ba7 \
+    --hash=sha256:7f5b7deae912cf8b77e990b9280f170381fdfbddf61b4ef80927edd813163732 \
+    --hash=sha256:8a21be69bd26fa81b1f80a61ee7ab05b076c674d9b18fb56239d72e21d9f4c80 \
+    --hash=sha256:9c250883f9fd81d212e0952c92dbfcc96fc237f4b7c92f56ac81fd48460b3e5a \
+    --hash=sha256:9f73dba9ec77acb86457a8fc04b5239822df0c14a082564737833d2963677dbc \
+    --hash=sha256:a0affb3a79a256b4183ba09811e3577c5163ed06685e4d4b46429a271ba174d2 \
+    --hash=sha256:a4c1bfcdbce96ff5d96fc9b08e3831acb30dc44ab02671eca5953eadad07d6d0 \
+    --hash=sha256:a6789be98a2017c912ae6ccb77ea553bbaf13d27605d2ca20a76dfbced631b24 \
+    --hash=sha256:a7b44178c9760ce1a43f544e595d35ed61ac2c3de306599fa59b38a6048e1aa7 \
+    --hash=sha256:bde31fc887c213e223bbfc34328070996061b0833b0a4cfec53745ed61f3519b \
+    --hash=sha256:c5fc54dbb712ff5e5a0fca797e6e0aa25726c7e72c6a5850cfd2adbc1eb0a372 \
+    --hash=sha256:de2904956dac40ced10931ac967ae63c5089bd498542194b436eb097a9f77bc8
     # via seq-retrieval (pyproject.toml)
 mypy-extensions==1.0.0 \
     --hash=sha256:4392f6c0eb8a5668a69e23d168ffa70f0be9ccfd32b5cc2d26a34ae5b844552d \