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beasteers committed Oct 9, 2024
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5 changes: 5 additions & 0 deletions .env
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VOLUMES=/data
REDIS_URL=redis://128.33.193.178:6379
BBN_CTL_URL=tcp://128.33.193.178:5555
BBN_MSG_URL=tcp://128.33.193.178:6666
BBN_MSG_URL2=tcp://128.33.193.178:6670
98 changes: 98 additions & 0 deletions .github/workflows/docker-publish.yaml
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name: Docker

# This workflow uses actions that are not certified by GitHub.
# They are provided by a third-party and are governed by
# separate terms of service, privacy policy, and support
# documentation.

on:
# schedule:
# - cron: '43 13 * * *'
push:
branches: [ "main" ]
# Publish semver tags as releases.
tags: [ 'v*.*.*' ]
pull_request:
branches: [ "main" ]

env:
# Use docker.io for Docker Hub if empty
REGISTRY: ghcr.io
# github.repository as <account>/<repo>
IMAGE_NAME: ${{ github.repository }}


jobs:
build:

runs-on: ubuntu-latest
permissions:
contents: read
packages: write
# This is used to complete the identity challenge
# with sigstore/fulcio when running outside of PRs.
id-token: write

steps:
- name: Checkout repository
uses: actions/checkout@v4

# Install the cosign tool except on PR
# https://github.com/sigstore/cosign-installer
- name: Install cosign
if: github.event_name != 'pull_request'
uses: sigstore/cosign-installer@59acb6260d9c0ba8f4a2f9d9b48431a222b68e20 #v3.5.0
with:
cosign-release: 'v2.2.4'

# Set up BuildKit Docker container builder to be able to build
# multi-platform images and export cache
# https://github.com/docker/setup-buildx-action
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@f95db51fddba0c2d1ec667646a06c2ce06100226 # v3.0.0

# Login against a Docker registry except on PR
# https://github.com/docker/login-action
- name: Log into registry ${{ env.REGISTRY }}
if: github.event_name != 'pull_request'
uses: docker/login-action@343f7c4344506bcbf9b4de18042ae17996df046d # v3.0.0
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

# Extract metadata (tags, labels) for Docker
# https://github.com/docker/metadata-action
- name: Extract Docker metadata
id: meta
uses: docker/metadata-action@96383f45573cb7f253c731d3b3ab81c87ef81934 # v5.0.0
with:
images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}

# Build and push Docker image with Buildx (don't push on PR)
# https://github.com/docker/build-push-action
- name: Build and push Docker image
id: build-and-push
uses: docker/build-push-action@0565240e2d4ab88bba5387d719585280857ece09 # v5.0.0
with:
context: .
push: ${{ github.event_name != 'pull_request' }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=gha
cache-to: type=gha,mode=max

# Sign the resulting Docker image digest except on PRs.
# This will only write to the public Rekor transparency log when the Docker
# repository is public to avoid leaking data. If you would like to publish
# transparency data even for private images, pass --force to cosign below.
# https://github.com/sigstore/cosign
- name: Sign the published Docker image
if: ${{ github.event_name != 'pull_request' }}
env:
# https://docs.github.com/en/actions/security-guides/security-hardening-for-github-actions#using-an-intermediate-environment-variable
TAGS: ${{ steps.meta.outputs.tags }}
DIGEST: ${{ steps.build-and-push.outputs.digest }}
# This step uses the identity token to provision an ephemeral certificate
# against the sigstore community Fulcio instance.
run: echo "${TAGS}" | xargs -I {} cosign sign --yes {}@${DIGEST}
130 changes: 130 additions & 0 deletions .gitignore
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# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# mac
.DS_Store

# dont upload model weights
*.pt
*.pth
*.ckpt
# dont upload videos
*.mp4

*.h5

*.swp
*.swo

output/
output2/

models/

# trash folders
shh/
shhh/
shhhh/

# C extensions
*.so

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

# PyInstaller
# Usually these files are written by a python script from a template
# before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
.hypothesis/
.pytest_cache/
tests/*/

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py
db.sqlite3

# Flask stuff:
instance/
.webassets-cache

# Scrapy stuff:
.scrapy

# Sphinx documentation
docs/_build/

# PyBuilder
target/

# Jupyter Notebook
.ipynb_checkpoints

# pyenv
.python-version

# celery beat schedule file
celerybeat-schedule

# SageMath parsed files
*.sage.py

# Environments
# .env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# mkdocs documentation
/site

# mypy
.mypy_cache/
10 changes: 10 additions & 0 deletions Dockerfile
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FROM python:3.9-slim

WORKDIR /src/app

ADD requirements.txt .
RUN pip install -r requirements.txt
ADD . .

ENTRYPOINT ["python3"]
CMD ["main.py", "run"]
5 changes: 5 additions & 0 deletions README.md
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# BBN Comms

```bash
docker compose up -d --build
```
137 changes: 137 additions & 0 deletions config/message-format.yaml
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########
# 1. BASIC HEADER STUFF (required)
########
header:
sender: # name / id you pick
sender software version: # version of your software you pick
header fmt version: 1.0 # 1.0 until we decide otherwise
transmit timestamp: # your clock at xmit time in fractional seconds since 1970
closest hololens dataframe timestamp: # clock for the most recent hololens frame as seconds since 1970

########
# 2a. CASUALTY COUNT / WORK STATIONS
# HARD CODED FOR DEMO 1 (required)
########
casualties:
populated: true # false if there are no casualties detected
count: 1 # integer, how many human bodies tasks are being tended to (0 if none)
confidence: 1.0 # (0-1.0) Your confidence in this count

########
# 2b. HARD CODED FOR DEMO 1 (required)
########
# skills open per casualty:
# dictionary of a list (key is casualty number),
# each element of the list is a list of two items.
# The two items are skill number (integer) and confidence (0-1.0).
# Confidence is the measure of certainty that the skill listed is really the skill.

skills open per casualty:
populated: true # false if there are no skills detected
casualty:
1:
- [M1,1.0]
- [M2,1.0]
- [R18,0.5]
- [M5,0.0]
- [M3,0.0]

########
# 2c. WHICH OF THESE SKILLS ARE DONE (optional/required?)
# THIS WILL CHANGE AS TREATMENT PROGRESSES
########
# belief skill is done per casualty:
# dictionary of a list (key is casualty number),
# each element of the list is a list of two items.
# The two items are skill number (integer) and belief the skill is complete (0-1.0).
# This is your systems belief that we've seen the end of activity on this skill.
# It is not a measure of progress, or of correctness. Just that we're done with the skill.
# If you are certain the skill is completed, your belief it is complete is 1.0.
# If you are certain the skill is being worked on your belief it is complete is 0.0.
# If you have no measure of this, your belief will always stay at 0.5

belief skill is done per casualty:
populated: true # false if there are no skills detected
casualty:
1:
- [M1,1.0]
- [M2,1.0]
- [R18,0.5]
- [M5,0.0]
- [M4,0.0]

########
# 2d. WHAT IS THE CURRENT SKILL STEP ACTIVITY? (required)
# MAY CHANGE EVERY FEW SECONDS
########

users current actions right now:
populated: true # false if there have been no skills or casualties
casualty currently working on:
casualty: 1 # HARD CODED FOR DEMO 1
confidence: 1.0 # HARD CODED FOR DEMO 1
current skill:
number: R18 # WHICH SKILL?
confidence: 1.0 # confidence of which skill (0-1.0)
steps: # STATE OF EACH STEP
-
number: 1
name: "Identify gunshot wound or penetrating trauma to chest" # String, looked up from the specific skill number, skill step
state: implied
confidence: 0.65
-
number: 2
name: "With gloved hand, cover and seal wound site."
state: done
confidence: 0.99
-
number: 3
name: "Open vented chest seal package."
state: done
confidence: 0.98
-
number: 4
name: "Wipe blood and body fluids from wound site."
state: current
confidence: 0.46
-
number: 5
name: "Peel away chest seal backer."
state: unobserved
confidence: 0.99
-
number: 6
name: "Place chest seal with circle of vents over wound site and seal to chest."
state: unobserved
confidence: 0.99
-
number: 7
name: "Look for exit wound, if found repeat process."
state: unobserved
confidence: 0.5

#######
# 3. MEASURE OF PROGRESS TOWARDS NEXT STEP (optional)
#######

next step progress velocity:
populated: false # set to true if you're populating this
velocity: 0 # TA1 arbitrary score (0-1) of progress from the current step to the next step

######
# 4. DO WE BELIEVE THERE ARE ANY ERRORS? (optional)
# This assumes a common error dictionary that will be described elsewhere
######

current errors:
populated: false # set to true when we get here and is being used. will happen per skill.
errors:
# will start by leaving this empty. will populate it later.

######
# 5. TA1 needs to consult with me about this. (future)
######

current user state: # TBD need help from this part of the community
populated: false # set to true when defined and you are using this.
# will start by leaving this empty. will populate it later.
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