Setup script changes and misc bug fixes #143
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| name: emap tests | |
| on: | |
| push: | |
| branches: [ main, develop ] | |
| pull_request: | |
| branches: [ main, develop, sk/waveform-dev ] | |
| repository_dispatch: | |
| permissions: | |
| contents: read | |
| checks: write | |
| id-token: write | |
| pull-requests: read # needed by paths-filter | |
| jobs: | |
| filter: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| emap-star: ${{ steps.filter.outputs.emap-star }} | |
| emap-interchange: ${{ steps.filter.outputs.emap-interchange }} | |
| core: ${{ steps.filter.outputs.core }} | |
| hl7-reader: ${{ steps.filter.outputs.hl7-reader }} | |
| waveform-reader: ${{ steps.filter.outputs.waveform-reader }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: dorny/paths-filter@v2 | |
| id: filter | |
| with: | |
| filters: | | |
| emap-star: | |
| - '.github/**' | |
| - 'emap-checker.xml' | |
| - 'emap-star/**' | |
| emap-interchange: | |
| - '.github/**' | |
| - 'emap-checker.xml' | |
| - 'emap-interchange/**' | |
| core: | |
| - '.github/**' | |
| - 'emap-checker.xml' | |
| - 'emap-interchange/**' | |
| - 'emap-star/**' | |
| - 'core/**' | |
| hl7-reader: | |
| - '.github/**' | |
| - 'emap-checker.xml' | |
| - 'emap-interchange/**' | |
| - 'emap-star/**' | |
| - 'hl7-reader/**' | |
| waveform-reader: | |
| - '.github/**' | |
| - 'emap-checker.xml' | |
| - 'emap-interchange/**' | |
| - 'waveform-reader/**' | |
| emap-star-tests: | |
| needs: [filter] | |
| runs-on: ubuntu-latest | |
| if: needs.filter.outputs.emap-star == 'true' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up java | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '17' | |
| distribution: 'temurin' | |
| cache: 'maven' | |
| - name: Run emap-star tests | |
| working-directory: emap-star | |
| run: mvn clean test | |
| - name: Publish Test Report | |
| uses: mikepenz/action-junit-report@v2 | |
| if: success() || failure() | |
| with: | |
| report_paths: '**/target/surefire-reports/TEST-*.xml' | |
| emap-interchange-tests: | |
| needs: [filter] | |
| runs-on: ubuntu-latest | |
| if: needs.filter.outputs.emap-interchange == 'true' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up java | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '17' | |
| distribution: 'temurin' | |
| cache: 'maven' | |
| - name: Run emap-interchange tests | |
| working-directory: emap-interchange | |
| run: mvn clean test | |
| - name: Publish Test Report | |
| uses: mikepenz/action-junit-report@v2 | |
| if: success() || failure() | |
| with: | |
| report_paths: '**/target/surefire-reports/TEST-*.xml' | |
| hl7-reader-tests: | |
| needs: [filter] | |
| runs-on: ubuntu-latest | |
| if: needs.filter.outputs.hl7-reader == 'true' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up java | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '17' | |
| distribution: 'temurin' | |
| cache: 'maven' | |
| - name: Build emap-star | |
| working-directory: emap-star | |
| run: mvn clean install | |
| - name: Build emap-interchange | |
| working-directory: emap-interchange | |
| run: mvn clean install | |
| - name: Run hl7-reader tests | |
| working-directory: hl7-reader | |
| run: mvn clean test | |
| - name: Publish Test Report | |
| uses: mikepenz/action-junit-report@v2 | |
| if: success() || failure() | |
| with: | |
| report_paths: '**/target/surefire-reports/TEST-*.xml' | |
| core-tests: | |
| needs: [filter] | |
| runs-on: ubuntu-latest | |
| if: needs.filter.outputs.core == 'true' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up java | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '17' | |
| distribution: 'temurin' | |
| cache: 'maven' | |
| - name: Build emap-star | |
| working-directory: emap-star | |
| run: mvn clean install | |
| - name: Build emap-interchange | |
| working-directory: emap-interchange | |
| run: mvn clean install | |
| - name: Build and test core | |
| run: mvn clean -Dspring.profiles.active=test integration-test -Dstart-class=uk.ac.ucl.rits.inform.datasinks.emapstar.App | |
| working-directory: core | |
| env: | |
| TZ: "America/Chicago" | |
| - name: Publish Test Report | |
| uses: mikepenz/action-junit-report@v2 | |
| if: success() || failure() | |
| with: | |
| report_paths: '**/target/surefire-reports/TEST-*.xml' | |
| waveform-reader-tests: | |
| needs: [filter] | |
| runs-on: ubuntu-latest | |
| if: needs.filter.outputs.waveform-reader == 'true' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up java | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '17' | |
| distribution: 'temurin' | |
| cache: 'maven' | |
| - name: Build emap-interchange | |
| working-directory: emap-interchange | |
| run: mvn clean install | |
| - name: Run waveform-reader tests | |
| working-directory: waveform-reader | |
| run: mvn clean test | |
| - name: Publish Test Report | |
| uses: mikepenz/action-junit-report@v2 | |
| if: success() || failure() | |
| with: | |
| report_paths: '**/target/surefire-reports/TEST-*.xml' |