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Merge pull request #88 from PRIDE-Utilities/dev
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Dev
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ypriverol authored Oct 12, 2023
2 parents d12e2f2 + 69350c6 commit 2cbfb2e
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion .github/workflows/update-owl.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -27,7 +27,7 @@ jobs:
cp unimod.obo tmp_unimod.obo
sed -e "s/pato.obo/pato.owl/g" -e "s/uo.obo/uo.owl/g" -i tmp_pride.obo
sed -e "s/pato.obo/pato.owl/g" -e "s/uo.obo/uo.owl/g" -i tmp_unimod.obo
head -n 50 tmp.obo
head -n 50 tmp_pride.obo
export JAVA_TOOL_OPTIONS=-Xmx6G
docker run --rm -v ${{ github.workspace }}:/work obolibrary/robot:v1.8.1 robot convert -vvv -i /work/tmp_pride.obo -o /work/pride_cv.owl --format owl
docker run --rm -v ${{ github.workspace }}:/work obolibrary/robot:v1.8.1 robot convert -vvv -i /work/tmp_unimod.obo -o /work/unimod.owl --format owl
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