-
Notifications
You must be signed in to change notification settings - Fork 2
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
🔄 synced local '.github/workflows/CI.yml' with remote '.github/workfl…
…ows/CI.yml'
- Loading branch information
1 parent
1dbbcc1
commit 64ce5d9
Showing
1 changed file
with
45 additions
and
38 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -22,64 +22,71 @@ jobs: | |
fail-fast: false | ||
matrix: | ||
version: | ||
- '1.9' | ||
python: [3.9] | ||
os: | ||
- ubuntu-latest | ||
- '1.10' | ||
python: | ||
- '3.10' | ||
os: [ubuntu-latest, macos-latest] | ||
arch: | ||
- x64 | ||
steps: | ||
- uses: actions/checkout@v2 | ||
# Cancel ongoing CI test runs if pushing to branch again before the previous tests | ||
# have finished | ||
- name: Cancel ongoing test runs for previous commits | ||
uses: styfle/[email protected] | ||
with: | ||
access_token: ${{ github.token }} | ||
# Do tests | ||
- uses: actions/checkout@v4 | ||
- name: Set up Python 🐍 ${{ matrix.python }} | ||
uses: actions/setup-python@v2 | ||
with: | ||
python-version: ${{ matrix.python }} | ||
- name: Create environment with micromamba 🐍🖤 | ||
uses: mamba-org/setup-micromamba@v1 | ||
with: | ||
micromamba-version: '1.5.6-0' | ||
environment-file: ./environment.yml | ||
environment-name: oggm_env # it is recommendable to add both name and yml file. | ||
init-shell: bash | ||
cache-environment: true | ||
# condarc-file: ./condarc.yml # If necessary, we can include .condarc to configure environment | ||
- name: Test creation of environment with micromamba 🔧🐍🖤 | ||
run: | | ||
which python | ||
conda env export | ||
shell: bash -el {0} | ||
- name: Update certifi | ||
run: | | ||
pip install --upgrade certifi | ||
python-version: ${{ matrix.python }} | ||
- name: Install certifi and set SSL_CERT_FILE | ||
run: | | ||
pip install --upgrade certifi | ||
echo "SSL_CERT_FILE=$(python -c 'import certifi; print(certifi.where())')" >> $GITHUB_ENV | ||
shell: bash -el {0} | ||
# - name: Test OGGM installation 🔧🌎 | ||
# run: pytest.oggm | ||
# shell: bash -el {0} | ||
- name: Set ENV Variables for PyCall.jl 🐍 📞 | ||
run: export PYTHON=/home/runner/micromamba/envs/oggm_env/bin/python | ||
shell: bash -el {0} | ||
- uses: julia-actions/setup-julia@v1 | ||
- uses: julia-actions/setup-julia@latest | ||
with: | ||
version: ${{ matrix.version }} | ||
arch: ${{ matrix.arch }} | ||
- name: Check Julia SSL certifications 🔎🔐 | ||
run: julia -e 'using NetworkOptions; println(NetworkOptions.bundled_ca_roots()); println(NetworkOptions.ca_roots())' | ||
shell: bash -el {0} | ||
- uses: julia-actions/cache@v1 | ||
- uses: julia-actions/cache@v2 | ||
with: | ||
cache-registries: "true" | ||
cache-compiled: "true" | ||
- uses: actions/cache@v4 | ||
env: | ||
cache-name: cache-artifacts | ||
with: | ||
path: ~/.julia/artifacts | ||
key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }} | ||
restore-keys: | | ||
${{ runner.os }}-test-${{ env.cache-name }}- | ||
${{ runner.os }}-test- | ||
${{ runner.os }}- | ||
- name: Install dependencies on Ubuntu | ||
if: matrix.os == 'ubuntu-latest' | ||
run: | | ||
sudo apt-get update | ||
sudo apt-get install -y libxml2 | ||
shell: bash -el {0} | ||
- name: Install dependencies on macOS | ||
if: matrix.os == 'macos-latest' | ||
run: | | ||
brew install libxml2 | ||
export PKG_CONFIG_PATH="/usr/local/opt/libxml2/lib/pkgconfig" | ||
shell: bash -el {0} | ||
- uses: julia-actions/julia-buildpkg@v1 | ||
env: | ||
PYTHON : /home/runner/micromamba/envs/oggm_env/bin/python | ||
# The SSL certificate path can be readed from the action "Check Julia SSL certifications" | ||
SSL_CERT_FILE: /etc/ssl/certs/ca-certificates.crt | ||
- uses: julia-actions/julia-runtest@v1 | ||
JULIA_SSL_CA_ROOTS_PATH: "" | ||
- uses: julia-actions/julia-runtest@latest | ||
env: | ||
PYTHON : /home/runner/micromamba/envs/oggm_env/bin/python | ||
SSL_CERT_FILE: /etc/ssl/certs/ca-certificates.crt | ||
JULIA_SSL_CA_ROOTS_PATH: "" | ||
- uses: julia-actions/julia-processcoverage@v1 | ||
- uses: codecov/codecov-action@v3 | ||
- uses: codecov/codecov-action@v4 | ||
with: | ||
token: ${{secrets.CODECOV_TOKEN}} | ||
files: lcov.info |