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NIRSTORM

NIRSTORM - a Brainstorm plugin for fNIRS data analysis.

Current features include:

  • classical within-subject analysis comprising motion correction, MBLL, and window-averaging.
  • statistical analysis using GLM
  • optimal montages that optimize the sensitivity to a given cortical region of interest
  • source reconstruction (cMEM, MNE)
  • precomputed fluence template based on Colin27

Main developers:

  • Edouard Delaire, PERFORM Centre and Physics dpt., Concordia University, Montreal, Canada
  • Thomas Vincent, EPIC Center, Montreal Heart Institute, Montreal, Canada
  • Zhengchen Cai, PERFORM Centre, and Physics dpt., Concordia University, Montreal, Canada
  • Robert Stojan, Sportpsychology, Chemnitz University of Technology, Germany
  • Alexis Machado, Multimodal Functional Imaging Lab., Biomedical Engineering Dpt, McGill University, Montreal, Canada

Collaborators:

  • Amanda Spilkin, PERFORM Centre and Physics dpt., Concordia University, Montreal, Canada
  • Jean-Marc Lina, Electrical Engineering Dpt, Ecole de Technologie Supérieure, Montréal, Canada
  • Christophe Grova, PERFORM Centre and physics dpt., Concordia University, Montreal, Canada
  • Louis Bherer, EPIC Center, Montreal Heart Institute, Montreal, Canada

Usage

The primary documentation is available on the nirstorm GitHub project wiki.

Installation

Nirstorm is available in two forms: an open-source Matlab plugin for Brainstorm (Matlab license required) and is included in the Brainstorm standalone version (Java executable)

Matlab version can be installed using the Brainstorm plugin system : Nirs_installation

This required the Brainstorm version 3.210414 (14 April 2021) or higher. To use nirstorm with a previous version of Brainstorm, refer to this tutorial https://github.com/Nirstorm/nirstorm/wiki/Installation (Note: We recommend you to always use the latest version of Brainstorm)

A standalone version is directly included in Brainstorm standalone version. Follow Brainstorm tutorials for more information: https://neuroimage.usc.edu/brainstorm/Installation