data: Added test report data for dragen coverage module

data/modules/dragen/pr_1880/read_me.txt

@@ -0,0 +1 @@
+Artificial coverage_metrics.csv and overall_mean_cov.csv files.

data/modules/dragen/pr_1880/sample_0.qc-coverage-region-1_coverage_metrics.csv

@@ -0,0 +1,33 @@
+COVERAGE SUMMARY,,Aligned bases,3203799614
+COVERAGE SUMMARY,,Aligned bases in QC coverage region,3641121654,81.63
+COVERAGE SUMMARY,,Average alignment coverage over QC coverage region,34.85
+COVERAGE SUMMARY,,Uniformity of coverage (PCT > 0.2*mean) over QC coverage region,56.88
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1500x: inf),0.008
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1000x: inf),0.012
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 500x: inf),0.021
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 100x: inf),0.039
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 50x: inf),4.13
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 20x: inf),50.25
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 15x: inf),61.05
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 10x: inf),74.21
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 3x: inf),86.55
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 1x: inf),99.96
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 0x: inf),100.00
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1000x:1500x),0.0009
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 500x:1000x),0.0007
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 100x: 500x),0.0001
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 50x: 100x),0.91
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 20x: 50x),0.82
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 15x: 20x),0.94
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 10x: 15x),0.55
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 3x: 10x),0.74
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 1x: 3x),0.1
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 0x: 1x),0.003
+COVERAGE SUMMARY,,Average chr X coverage over QC coverage region,106.85
+COVERAGE SUMMARY,,Average chr Y coverage over QC coverage region,91.97
+COVERAGE SUMMARY,,Average mitochondrial coverage over QC coverage region,37.4
+COVERAGE SUMMARY,,Average autosomal coverage over QC coverage region,42.78
+COVERAGE SUMMARY,,Median autosomal coverage over QC coverage region,47.02
+COVERAGE SUMMARY,,Mean/Median autosomal coverage ratio over QC coverage region,96.12
+COVERAGE SUMMARY,,Aligned reads,2847205512
+COVERAGE SUMMARY,,Aligned reads in QC coverage region,2958440055,21.71

data/modules/dragen/pr_1880/sample_0.qc-coverage-region-1_overall_mean_cov.csv

@@ -0,0 +1 @@
+Average alignment coverage over C:/path/to/QC_1.bed,0.25

data/modules/dragen/pr_1880/sample_0.qc-coverage-region-2_coverage_metrics.csv

@@ -0,0 +1,33 @@
+COVERAGE SUMMARY,,Aligned bases,2946670263
+COVERAGE SUMMARY,,Aligned bases in QC coverage region,2715483017,8.56
+COVERAGE SUMMARY,,Average alignment coverage over QC coverage region,27.64
+COVERAGE SUMMARY,,Uniformity of coverage (PCT > 0.2*mean) over QC coverage region,38.82
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1500x: inf),0.006
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1000x: inf),0.019
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 500x: inf),0.023
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 100x: inf),0.03
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 50x: inf),4.75
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 20x: inf),56.14
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 15x: inf),65.14
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 10x: inf),79.34
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 3x: inf),84.18
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 1x: inf),99.97
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 0x: inf),100.00
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1000x:1500x),0.0001
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 500x:1000x),0.0004
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 100x: 500x),0.0007
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 50x: 100x),0.72
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 20x: 50x),0.81
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 15x: 20x),0.76
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 10x: 15x),0.88
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 3x: 10x),0.44
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 1x: 3x),0.16
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 0x: 1x),0.01
+COVERAGE SUMMARY,,Average chr X coverage over QC coverage region,94.78
+COVERAGE SUMMARY,,Average chr Y coverage over QC coverage region,118.68
+COVERAGE SUMMARY,,Average mitochondrial coverage over QC coverage region,23.8
+COVERAGE SUMMARY,,Average autosomal coverage over QC coverage region,25.64
+COVERAGE SUMMARY,,Median autosomal coverage over QC coverage region,49.91
+COVERAGE SUMMARY,,Mean/Median autosomal coverage ratio over QC coverage region,15.67
+COVERAGE SUMMARY,,Aligned reads,2124858553
+COVERAGE SUMMARY,,Aligned reads in QC coverage region,2763882560,77.43

data/modules/dragen/pr_1880/sample_0.qc-coverage-region-2_overall_mean_cov.csv

@@ -0,0 +1 @@
+Average alignment coverage over C:/path/to/QC_2.bed,0.25

data/modules/dragen/pr_1880/sample_0.target_bed_coverage_metrics.csv

@@ -0,0 +1,33 @@
+COVERAGE SUMMARY,,Aligned bases,2893234893
+COVERAGE SUMMARY,,Aligned bases in target bed,1293045769,63.21
+COVERAGE SUMMARY,,Average alignment coverage over target bed,34.27
+COVERAGE SUMMARY,,Uniformity of coverage (PCT > 0.2*mean) over target bed,52.65
+COVERAGE SUMMARY,,PCT of target bed with coverage [1500x: inf),0.004
+COVERAGE SUMMARY,,PCT of target bed with coverage [1000x: inf),0.02
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 500x: inf),0.026
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 100x: inf),0.038
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 50x: inf),4.84
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 20x: inf),53.34
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 15x: inf),62.96
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 10x: inf),72.13
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 3x: inf),88.34
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 1x: inf),96.96
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 0x: inf),100.00
+COVERAGE SUMMARY,,PCT of target bed with coverage [1000x:1500x),0.001
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 500x:1000x),0.0007
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 100x: 500x),0.0008
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 50x: 100x),0.93
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 20x: 50x),0.79
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 15x: 20x),0.55
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 10x: 15x),0.56
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 3x: 10x),0.92
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 1x: 3x),0.12
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 0x: 1x),0.002
+COVERAGE SUMMARY,,Average chr X coverage over target bed,47.69
+COVERAGE SUMMARY,,Average chr Y coverage over target bed,35.95
+COVERAGE SUMMARY,,Average mitochondrial coverage over target bed,25.2
+COVERAGE SUMMARY,,Average autosomal coverage over target bed,32.32
+COVERAGE SUMMARY,,Median autosomal coverage over target bed,21.29
+COVERAGE SUMMARY,,Mean/Median autosomal coverage ratio over target bed,62.24
+COVERAGE SUMMARY,,Aligned reads,1893972640
+COVERAGE SUMMARY,,Aligned reads in target bed,2299894892,58.29

data/modules/dragen/pr_1880/sample_0.target_bed_overall_mean_cov.csv

@@ -0,0 +1 @@
+Average alignment coverage over C:/path/to/very_special_region.bed,0.04

data/modules/dragen/pr_1880/sample_0.wgs_coverage_metrics.csv

@@ -0,0 +1,33 @@
+COVERAGE SUMMARY,,Aligned bases,2461606803
+COVERAGE SUMMARY,,Aligned bases in genome,2359893297,3.11
+COVERAGE SUMMARY,,Average alignment coverage over genome,91.15
+COVERAGE SUMMARY,,Uniformity of coverage (PCT > 0.2*mean) over genome,81.17
+COVERAGE SUMMARY,,PCT of genome with coverage [1500x: inf),0.004
+COVERAGE SUMMARY,,PCT of genome with coverage [1000x: inf),0.019
+COVERAGE SUMMARY,,PCT of genome with coverage [ 500x: inf),0.023
+COVERAGE SUMMARY,,PCT of genome with coverage [ 100x: inf),0.038
+COVERAGE SUMMARY,,PCT of genome with coverage [ 50x: inf),4.32
+COVERAGE SUMMARY,,PCT of genome with coverage [ 20x: inf),50.93
+COVERAGE SUMMARY,,PCT of genome with coverage [ 15x: inf),69.88
+COVERAGE SUMMARY,,PCT of genome with coverage [ 10x: inf),71.57
+COVERAGE SUMMARY,,PCT of genome with coverage [ 3x: inf),88.02
+COVERAGE SUMMARY,,PCT of genome with coverage [ 1x: inf),93.11
+COVERAGE SUMMARY,,PCT of genome with coverage [ 0x: inf),100.00
+COVERAGE SUMMARY,,PCT of genome with coverage [1000x:1500x),0.0
+COVERAGE SUMMARY,,PCT of genome with coverage [ 500x:1000x),0.001
+COVERAGE SUMMARY,,PCT of genome with coverage [ 100x: 500x),0.0001
+COVERAGE SUMMARY,,PCT of genome with coverage [ 50x: 100x),0.78
+COVERAGE SUMMARY,,PCT of genome with coverage [ 20x: 50x),0.56
+COVERAGE SUMMARY,,PCT of genome with coverage [ 15x: 20x),0.58
+COVERAGE SUMMARY,,PCT of genome with coverage [ 10x: 15x),0.44
+COVERAGE SUMMARY,,PCT of genome with coverage [ 3x: 10x),0.94
+COVERAGE SUMMARY,,PCT of genome with coverage [ 1x: 3x),0.19
+COVERAGE SUMMARY,,PCT of genome with coverage [ 0x: 1x),0.006
+COVERAGE SUMMARY,,Average chr X coverage over genome,64.41
+COVERAGE SUMMARY,,Average chr Y coverage over genome,55.9
+COVERAGE SUMMARY,,Average mitochondrial coverage over genome,25.1
+COVERAGE SUMMARY,,Average autosomal coverage over genome,77.22
+COVERAGE SUMMARY,,Median autosomal coverage over genome,45.84
+COVERAGE SUMMARY,,Mean/Median autosomal coverage ratio over genome,76.52
+COVERAGE SUMMARY,,Aligned reads,2316127540
+COVERAGE SUMMARY,,Aligned reads in genome,1882984161,64.45

data/modules/dragen/pr_1880/sample_0.wgs_overall_mean_cov.csv

@@ -0,0 +1 @@
+Average alignment coverage over C:/path/to/Whole_genome_756,0.92

data/modules/dragen/pr_1880/sample_1.qc-coverage-region-1_coverage_metrics.csv

@@ -0,0 +1,33 @@
+COVERAGE SUMMARY,,Aligned bases,2259848749
+COVERAGE SUMMARY,,Aligned bases in QC coverage region,3606773472,98.55
+COVERAGE SUMMARY,,Average alignment coverage over QC coverage region,38.43
+COVERAGE SUMMARY,,Uniformity of coverage (PCT > 0.2*mean) over QC coverage region,98.21
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1500x: inf),0.002
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1000x: inf),0.018
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 500x: inf),0.029
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 100x: inf),0.031
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 50x: inf),4.27
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 20x: inf),55.01
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 15x: inf),66.28
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 10x: inf),77.2
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 3x: inf),84.88
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 1x: inf),91.22
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 0x: inf),100.00
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1000x:1500x),0.0007
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 500x:1000x),0.0003
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 100x: 500x),0.0006
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 50x: 100x),0.68
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 20x: 50x),0.5
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 15x: 20x),0.43
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 10x: 15x),0.73
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 3x: 10x),0.2
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 1x: 3x),0.16
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 0x: 1x),0.004
+COVERAGE SUMMARY,,Average chr X coverage over QC coverage region,53.38
+COVERAGE SUMMARY,,Average chr Y coverage over QC coverage region,25.04
+COVERAGE SUMMARY,,Average mitochondrial coverage over QC coverage region,62.8
+COVERAGE SUMMARY,,Average autosomal coverage over QC coverage region,5.52
+COVERAGE SUMMARY,,Median autosomal coverage over QC coverage region,30.81
+COVERAGE SUMMARY,,Mean/Median autosomal coverage ratio over QC coverage region,61.82
+COVERAGE SUMMARY,,Aligned reads,3389256695
+COVERAGE SUMMARY,,Aligned reads in QC coverage region,3018211123,55.5

data/modules/dragen/pr_1880/sample_1.qc-coverage-region-1_overall_mean_cov.csv

@@ -0,0 +1 @@
+Average alignment coverage over C:/path/to/QC_1.bed,0.35

data/modules/dragen/pr_1880/sample_1.qc-coverage-region-2_coverage_metrics.csv

@@ -0,0 +1,33 @@
+COVERAGE SUMMARY,,Aligned bases,3346711556
+COVERAGE SUMMARY,,Aligned bases in QC coverage region,2623854005,90.62
+COVERAGE SUMMARY,,Average alignment coverage over QC coverage region,93.34
+COVERAGE SUMMARY,,Uniformity of coverage (PCT > 0.2*mean) over QC coverage region,45.08
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1500x: inf),0.005
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1000x: inf),0.012
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 500x: inf),0.028
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 100x: inf),0.031
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 50x: inf),4.03
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 20x: inf),55.43
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 15x: inf),62.13
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 10x: inf),72.39
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 3x: inf),83.49
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 1x: inf),93.88
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 0x: inf),100.00
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [1000x:1500x),0.0004
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 500x:1000x),0.001
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 100x: 500x),0.0007
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 50x: 100x),0.94
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 20x: 50x),0.99
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 15x: 20x),0.71
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 10x: 15x),0.49
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 3x: 10x),0.47
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 1x: 3x),0.19
+COVERAGE SUMMARY,,PCT of QC coverage region with coverage [ 0x: 1x),0.004
+COVERAGE SUMMARY,,Average chr X coverage over QC coverage region,52.57
+COVERAGE SUMMARY,,Average chr Y coverage over QC coverage region,64.51
+COVERAGE SUMMARY,,Average mitochondrial coverage over QC coverage region,69.8
+COVERAGE SUMMARY,,Average autosomal coverage over QC coverage region,92.83
+COVERAGE SUMMARY,,Median autosomal coverage over QC coverage region,9.02
+COVERAGE SUMMARY,,Mean/Median autosomal coverage ratio over QC coverage region,15.63
+COVERAGE SUMMARY,,Aligned reads,1787901960
+COVERAGE SUMMARY,,Aligned reads in QC coverage region,2174401483,66.19

data/modules/dragen/pr_1880/sample_1.qc-coverage-region-2_overall_mean_cov.csv

@@ -0,0 +1 @@
+Average alignment coverage over C:/path/to/QC_2.bed,0.32

data/modules/dragen/pr_1880/sample_1.target_bed_coverage_metrics.csv

@@ -0,0 +1,33 @@
+COVERAGE SUMMARY,,Aligned bases,2361766274
+COVERAGE SUMMARY,,Aligned bases in target bed,3366208386,37.34
+COVERAGE SUMMARY,,Average alignment coverage over target bed,62.22
+COVERAGE SUMMARY,,Uniformity of coverage (PCT > 0.2*mean) over target bed,26.93
+COVERAGE SUMMARY,,PCT of target bed with coverage [1500x: inf),0.009
+COVERAGE SUMMARY,,PCT of target bed with coverage [1000x: inf),0.019
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 500x: inf),0.021
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 100x: inf),0.039
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 50x: inf),4.76
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 20x: inf),50.12
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 15x: inf),60.26
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 10x: inf),76.29
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 3x: inf),81.25
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 1x: inf),98.78
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 0x: inf),100.00
+COVERAGE SUMMARY,,PCT of target bed with coverage [1000x:1500x),0.0006
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 500x:1000x),0.0004
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 100x: 500x),0.0003
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 50x: 100x),0.87
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 20x: 50x),0.58
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 15x: 20x),0.98
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 10x: 15x),0.75
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 3x: 10x),0.63
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 1x: 3x),0.2
+COVERAGE SUMMARY,,PCT of target bed with coverage [ 0x: 1x),0.009
+COVERAGE SUMMARY,,Average chr X coverage over target bed,78.13
+COVERAGE SUMMARY,,Average chr Y coverage over target bed,102.29
+COVERAGE SUMMARY,,Average mitochondrial coverage over target bed,34.7
+COVERAGE SUMMARY,,Average autosomal coverage over target bed,39.82
+COVERAGE SUMMARY,,Median autosomal coverage over target bed,45.1
+COVERAGE SUMMARY,,Mean/Median autosomal coverage ratio over target bed,67.84
+COVERAGE SUMMARY,,Aligned reads,2495730726
+COVERAGE SUMMARY,,Aligned reads in target bed,1161249079,5.98

data/modules/dragen/pr_1880/sample_1.target_bed_overall_mean_cov.csv

@@ -0,0 +1 @@
+Average alignment coverage over C:/path/to/very_special_region.bed,0.91

data/modules/dragen/pr_1880/sample_1.wgs_coverage_metrics.csv

@@ -0,0 +1,33 @@
+COVERAGE SUMMARY,,Aligned bases,1351016290
+COVERAGE SUMMARY,,Aligned bases in genome,3092855543,71.79
+COVERAGE SUMMARY,,Average alignment coverage over genome,49.02
+COVERAGE SUMMARY,,Uniformity of coverage (PCT > 0.2*mean) over genome,90.7
+COVERAGE SUMMARY,,PCT of genome with coverage [1500x: inf),0.01
+COVERAGE SUMMARY,,PCT of genome with coverage [1000x: inf),0.012
+COVERAGE SUMMARY,,PCT of genome with coverage [ 500x: inf),0.03
+COVERAGE SUMMARY,,PCT of genome with coverage [ 100x: inf),0.037
+COVERAGE SUMMARY,,PCT of genome with coverage [ 50x: inf),4.52
+COVERAGE SUMMARY,,PCT of genome with coverage [ 20x: inf),55.85
+COVERAGE SUMMARY,,PCT of genome with coverage [ 15x: inf),67.65
+COVERAGE SUMMARY,,PCT of genome with coverage [ 10x: inf),76.44
+COVERAGE SUMMARY,,PCT of genome with coverage [ 3x: inf),88.07
+COVERAGE SUMMARY,,PCT of genome with coverage [ 1x: inf),90.31
+COVERAGE SUMMARY,,PCT of genome with coverage [ 0x: inf),100.00
+COVERAGE SUMMARY,,PCT of genome with coverage [1000x:1500x),0.0002
+COVERAGE SUMMARY,,PCT of genome with coverage [ 500x:1000x),0.0
+COVERAGE SUMMARY,,PCT of genome with coverage [ 100x: 500x),0.0003
+COVERAGE SUMMARY,,PCT of genome with coverage [ 50x: 100x),0.58
+COVERAGE SUMMARY,,PCT of genome with coverage [ 20x: 50x),0.47
+COVERAGE SUMMARY,,PCT of genome with coverage [ 15x: 20x),0.9
+COVERAGE SUMMARY,,PCT of genome with coverage [ 10x: 15x),0.47
+COVERAGE SUMMARY,,PCT of genome with coverage [ 3x: 10x),0.53
+COVERAGE SUMMARY,,PCT of genome with coverage [ 1x: 3x),0.13
+COVERAGE SUMMARY,,PCT of genome with coverage [ 0x: 1x),0.007
+COVERAGE SUMMARY,,Average chr X coverage over genome,35.86
+COVERAGE SUMMARY,,Average chr Y coverage over genome,69.19
+COVERAGE SUMMARY,,Average mitochondrial coverage over genome,39.9
+COVERAGE SUMMARY,,Average autosomal coverage over genome,25.33
+COVERAGE SUMMARY,,Median autosomal coverage over genome,76.76
+COVERAGE SUMMARY,,Mean/Median autosomal coverage ratio over genome,62.69
+COVERAGE SUMMARY,,Aligned reads,1359749411
+COVERAGE SUMMARY,,Aligned reads in genome,1014219778,10.06

data/modules/dragen/pr_1880/sample_1.wgs_overall_mean_cov.csv

@@ -0,0 +1 @@
+Average alignment coverage over C:/path/to/Whole_genome_756,0.18