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@MontgomeryLab

Montgomery Lab

The Montgomery Lab at CSU studies gene regulation via small RNAs in the model organism C. elegans.

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  1. tinyRNA tinyRNA Public

    tinyRNA provides an all-in-one solution for precision analysis of sRNA-seq data. At the core of tinyRNA is a highly flexible counting utility, tiny-count, that allows for hierarchical assignment of…

    Python 1 1

  2. aquatx-dashboard aquatx-dashboard Public

    R 1

  3. RNA-integrate RNA-integrate Public

    RNA-i performs differential mRNA and small RNA expression analysis to identify relationships between small RNAs and their target mRNAs.

    R

Repositories

Showing 3 of 3 repositories
  • tinyRNA Public

    tinyRNA provides an all-in-one solution for precision analysis of sRNA-seq data. At the core of tinyRNA is a highly flexible counting utility, tiny-count, that allows for hierarchical assignment of reads to features based on positional information, extent of feature overlap, 5’ nucleotide, length, and strandedness.

    MontgomeryLab/tinyRNA’s past year of commit activity
    Python 1 GPL-3.0 1 2 1 Updated Jul 8, 2024
  • RNA-integrate Public

    RNA-i performs differential mRNA and small RNA expression analysis to identify relationships between small RNAs and their target mRNAs.

    MontgomeryLab/RNA-integrate’s past year of commit activity
    R 0 0 0 0 Updated Mar 7, 2024
  • MontgomeryLab/aquatx-dashboard’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Jan 26, 2020

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