Releases: FBartos/RoBMA
Releases · FBartos/RoBMA
RoBMA 3.1.0
Features
- binomial-normal models for binary data via the
BiBMA
function NoBMA
andNoBMA.reg()
functions as wrappers aroundRoBMA
RoBMA.reg()
functions for simpler specification of publication bias unadjusted Bayesian model-averaged meta-analysis- adding odds ratios output transformation`
- extending (instead of a complete refitting) of models via the
update.RoBMA()
function (only non-converged models by default or all by settingextend_all = TRUE
)
Fixes
- handling of non-converged models
RoBMA 3.0.1
RoBMA 3.0
Features
- meta-regression with
RoBMA.reg()
function - posterior marginal summary and plots for the
RoBMA.reg
models withsummary_marginal()
andplot_marginal()
functions - new vignette on hierarchical Bayesian model-averaged meta-analysis
- new vignette on robust Bayesian model-averaged meta-regression
- adding vignette from AMPPS tutorial
- faster implementation of JAGS multivariate normal distribution (based on the BUGS JAGS module)
- incorporating
weight
argument in theRoBMA
andcombine_data
functions in order to passcustom
likelihood weights - ability to use inverse square weights in the weighted meta-analysis by setting a
weighted_type = "inverse_sqrt"
argument
Changes
- reworked interface for the hierarchical models. Prior distributions are now specified via the
priors_hierarchical
andpriors_hierarchical_null
arguments instead ofpriors_rho
andpriors_rho_null
. The model summary now showsHierarchical
component summary.
RoBMA 2.3.2
Fixes
- suppressing start-up message
- cleaning up imports
RoBMA 2.3.1
Fixes
- fixing weighted meta-analysis parameterization
RoBMA 2.3
version 2.3
Features
- weighted meta-analysis by specifying
study_ids
argument inRoBMA
and settingweighted = TRUE
. The likelihood contribution of estimates from each study is down-weighted proportionally to the number of estimates in that study. Note that this experimental feature is supposed to provide a conservative alternative for estimating RoBMA in cases with multiple estimates from a study where the multivariate option is not computationally feasible.
RoBMA 2.0.0 - 2.2.2
Features
- three-level meta-analysis by specifying
study_ids
argument inRoBMA
. However, note that this is (1) an experimental feature and (2) the computational expense of fitting selection models with clustering is extreme. As of now, it is almost impossible to have more than 2-3 estimates clustered within a single study).
Changes
- message about the effect size scale of parameter estimates is always shown
- compatibility with BayesTools 0.2.0+
Fixes
- updating the C++ to compile on M1 Mac
RoBMA 2.1.2
Fixes
- adding Windows ucrt patch (thanks to Tomas Kalibera)
Updates
- adding BayesTools version check
RoBMA 2.1.1
Fixes
- incorrectly formatted citations in vignettes and capitalization
Features
- adding
informed_prior()
function (from the BayesTools package) that allows specification of various informed prior distributions from the field of medicine and psychology - adding a vignette reproducing the example of dentine sensitivity with the informed Bayesian model-averaged meta-analysis from Bartoš et al., 2021 (open-access),
- further reductions of fitted object size when setting
save = "min"
RoBMA 2.1
Fixes
- more informative error message when the JAGS module fails to load
- correcting wrong PEESE transformation for the individual models summaries (issue #12)
- fixing error message for missing conditional PET-PEESE
- fixing incorrect lower bound check for log(OR)
Features
- adding
interpret()
function (issue #11) - adding effect size transformation via
output_scale
argument toplot()
andplot_models()
functions - better handling of effect size transformations and scaling - BayesTools style back-end functions with Jacobian transformations