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Releases: FBartos/RoBMA

RoBMA 3.1.0

19 Jul 21:13
8de6009
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Features

  • binomial-normal models for binary data via the BiBMA function
  • NoBMA and NoBMA.reg() functions as wrappers around RoBMA RoBMA.reg() functions for simpler specification of publication bias unadjusted Bayesian model-averaged meta-analysis
  • adding odds ratios output transformation`
  • extending (instead of a complete refitting) of models via the update.RoBMA() function (only non-converged models by default or all by setting extend_all = TRUE)

Fixes

  • handling of non-converged models

RoBMA 3.0.1

02 Jun 12:34
edcf9e7
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Fixes (thanks to Don & Rens)

  • compilation issues with Clang (#28)
  • lapack path specifications (#24)

RoBMA 3.0

31 May 07:03
060b631
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Features

  • meta-regression with RoBMA.reg() function
  • posterior marginal summary and plots for the RoBMA.reg models with summary_marginal() and plot_marginal() functions
  • new vignette on hierarchical Bayesian model-averaged meta-analysis
  • new vignette on robust Bayesian model-averaged meta-regression
  • adding vignette from AMPPS tutorial
  • faster implementation of JAGS multivariate normal distribution (based on the BUGS JAGS module)
  • incorporating weight argument in the RoBMA and combine_data functions in order to pass custom likelihood weights
  • ability to use inverse square weights in the weighted meta-analysis by setting a weighted_type = "inverse_sqrt" argument

Changes

  • reworked interface for the hierarchical models. Prior distributions are now specified via the priors_hierarchical and priors_hierarchical_null arguments instead of priors_rho and priors_rho_null. The model summary now shows Hierarchical component summary.

RoBMA 2.3.2

13 Mar 15:30
0bd253e
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Fixes

  • suppressing start-up message
  • cleaning up imports

RoBMA 2.3.1

16 Jul 22:11
8df3962
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Fixes

  • fixing weighted meta-analysis parameterization

RoBMA 2.3

13 Jul 13:05
d40f77b
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version 2.3

Features

  • weighted meta-analysis by specifying study_ids argument in RoBMA and setting weighted = TRUE. The likelihood contribution of estimates from each study is down-weighted proportionally to the number of estimates in that study. Note that this experimental feature is supposed to provide a conservative alternative for estimating RoBMA in cases with multiple estimates from a study where the multivariate option is not computationally feasible.

RoBMA 2.0.0 - 2.2.2

20 Apr 15:07
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Features

  • three-level meta-analysis by specifying study_ids argument in RoBMA. However, note that this is (1) an experimental feature and (2) the computational expense of fitting selection models with clustering is extreme. As of now, it is almost impossible to have more than 2-3 estimates clustered within a single study).

Changes

  • message about the effect size scale of parameter estimates is always shown
  • compatibility with BayesTools 0.2.0+

Fixes

  • updating the C++ to compile on M1 Mac

RoBMA 2.1.2

13 Jan 08:12
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Fixes

  • adding Windows ucrt patch (thanks to Tomas Kalibera)

Updates

  • adding BayesTools version check

RoBMA 2.1.1

03 Nov 09:40
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Fixes

  • incorrectly formatted citations in vignettes and capitalization

Features

  • adding informed_prior() function (from the BayesTools package) that allows specification of various informed prior distributions from the field of medicine and psychology
  • adding a vignette reproducing the example of dentine sensitivity with the informed Bayesian model-averaged meta-analysis from Bartoš et al., 2021 (open-access),
  • further reductions of fitted object size when setting save = "min"

RoBMA 2.1

14 Oct 06:10
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Fixes

  • more informative error message when the JAGS module fails to load
  • correcting wrong PEESE transformation for the individual models summaries (issue #12)
  • fixing error message for missing conditional PET-PEESE
  • fixing incorrect lower bound check for log(OR)

Features

  • adding interpret() function (issue #11)
  • adding effect size transformation via output_scale argument to plot() and plot_models() functions
  • better handling of effect size transformations and scaling - BayesTools style back-end functions with Jacobian transformations