Update doc for version "master"

colvars-refman-namd/colvars-refman-namd.html

@@ -3148,7 +3148,7 @@ <h5 class="subsubsectionHead"><span class="titlemark">4.13.1 </span> <a id="s
  unless a frame of reference other than the laboratory is needed, it is computationally much
  more efficient to select atoms via <a href="https://www.ks.uiuc.edu/Research/namd/2.14/ug/node43.html">GridForces</a> keywords.
  </li>
-<li class="itemize"><a id="colvar|mapTotal|atomWeights"></a> <span class="colorbox" id="colorbox217"><a id="dx1-90005"></a><span class="ectt-1095">atoms</span></span> — <span class="phvro8t-x-x-109">Weights to assign to each atom</span><br class="newline"/>Default: all weights equal to 1 <!--l. 3775--><math display="inline" xmlns="http://www.w3.org/1998/Math/MathML"><mo class="MathClass-open">[</mo></math> list
+<li class="itemize"><a id="colvar|mapTotal|atomWeights"></a> <span class="colorbox" id="colorbox217"><a id="dx1-90005"></a><span class="ectt-1095">atomWeights</span></span> — <span class="phvro8t-x-x-109">Weights to assign to each atom</span><br class="newline"/>Default: all weights equal to 1 <!--l. 3775--><math display="inline" xmlns="http://www.w3.org/1998/Math/MathML"><mo class="MathClass-open">[</mo></math> list
  of space-separated decimals, context: <span class="ectt-1095">mapTotal</span> <!--l. 3775--><math display="inline" xmlns="http://www.w3.org/1998/Math/MathML"><mo class="MathClass-close">]</mo></math><br class="newline"/>If defined, the value of this option assigns weights <!--l. 3775--><math display="inline" xmlns="http://www.w3.org/1998/Math/MathML"><msub><mrow><mi>w</mi></mrow><mrow><mi>i</mi></mrow></msub></math>
  to the individual atoms in a <span class="ectt-1095">mapTotal </span>variable. This option requires defining <span class="ectt-1095">atoms </span>explicitly,
  and the number of weights must match the number of atoms.

colvars-refman-vmd/colvars-refman-vmd.html

@@ -3366,7 +3366,7 @@ <h5 class="subsubsectionHead"><span class="titlemark">5.13.1 </span> <a id="s
  volumetric map in a rotated frame of reference (see <a href="#sec:colvar_atom_groups_ref_frame">6.2<!--tex4ht:ref: sec:colvar_atom_groups_ref_frame --></a>). In VMD, this definition is required,
  otherwise the <span class="ectt-1095">mapTotal </span>value is identically zero.
  </li>
-<li class="itemize"><a id="colvar|mapTotal|atomWeights"></a> <span class="colorbox" id="colorbox213"><a id="dx1-102004"></a><span class="ectt-1095">atoms</span></span> — <span class="phvro8t-x-x-109">Weights to assign to each atom</span><br class="newline"/>Default: all weights equal to 1 <!--l. 3775--><math display="inline" xmlns="http://www.w3.org/1998/Math/MathML"><mo class="MathClass-open">[</mo></math> list
+<li class="itemize"><a id="colvar|mapTotal|atomWeights"></a> <span class="colorbox" id="colorbox213"><a id="dx1-102004"></a><span class="ectt-1095">atomWeights</span></span> — <span class="phvro8t-x-x-109">Weights to assign to each atom</span><br class="newline"/>Default: all weights equal to 1 <!--l. 3775--><math display="inline" xmlns="http://www.w3.org/1998/Math/MathML"><mo class="MathClass-open">[</mo></math> list
  of space-separated decimals, context: <span class="ectt-1095">mapTotal</span> <!--l. 3775--><math display="inline" xmlns="http://www.w3.org/1998/Math/MathML"><mo class="MathClass-close">]</mo></math><br class="newline"/>If defined, the value of this option assigns weights <!--l. 3775--><math display="inline" xmlns="http://www.w3.org/1998/Math/MathML"><msub><mrow><mi>w</mi></mrow><mrow><mi>i</mi></mrow></msub></math>
  to the individual atoms in a <span class="ectt-1095">mapTotal </span>variable. This option requires defining <span class="ectt-1095">atoms </span>explicitly,
  and the number of weights must match the number of atoms.

doxygen/html/annotated.html

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doxygen/html/classArithmeticPathCV_1_1ArithmeticPathBase-members.html

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doxygen/html/classArithmeticPathCV_1_1ArithmeticPathBase.html

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doxygen/html/classGeometricPathCV_1_1GeometricPathBase-members.html

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doxygen/html/classGeometricPathCV_1_1GeometricPathBase.html

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doxygen/html/classLAMMPS__NS_1_1FixColvars-members.html

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doxygen/html/classLAMMPS__NS_1_1FixColvars.html

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doxygen/html/classUIestimator_1_1UIestimator-members.html

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doxygen/html/classUIestimator_1_1UIestimator.html

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doxygen/html/classUIestimator_1_1n__matrix-members.html

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doxygen/html/classUIestimator_1_1n__matrix.html

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doxygen/html/classUIestimator_1_1n__vector-members.html

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doxygen/html/classUIestimator_1_1n__vector.html

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doxygen/html/classcolvar-members.html

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doxygen/html/classcolvar.html

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doxygen/html/classcolvar_1_1CVBasedPath-members.html

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doxygen/html/classcolvar_1_1CVBasedPath.html

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doxygen/html/classcolvar_1_1CartesianBasedPath.html

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doxygen/html/classcolvar_1_1alch__Flambda-members.html

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