Merge pull request #135 from AH-Merii/create-release-0.5.0dev

Add automated tests and release v0.5.0-dev

.github/workflows/publish.yaml

@@ -4,11 +4,51 @@
 name: Publish BioPandas to PyPI / GitHub
 
 on:
- push:
- tags:
- - "v*"
+ pull_request:
+ branches: [ main ]
+
 jobs:
+ test-style:
+ name: Run style tests
+ runs-on: ubuntu-latest
+
+ steps:
+ - uses: actions/checkout@v3
+
+ - name: Set up Python
+ uses: actions/setup-python@v4
+ with:
+ python-version: '3.x'
+ cache: 'pip'
+
+ - name: Install package dependencies for testing
+ run: pip install [test]
+
+ - name: Run all the pytest tests
+ run: flake8 ./biopandas
+
+ test-pytest:
+ name: Run pytest tests
+ runs-on: ubuntu-latest
+
+ steps:
+ - uses: actions/checkout@v3
+
+ - name: Set up Python
+ uses: actions/setup-python@v4
+ with:
+ python-version: '3.x'
+ cache: 'pip'
+
+ - name: Install package dependencies for testing
+ run: pip install .[test]
+
+ - name: Run all the pytest tests
+ run: pytest ./biopandas -sv
+
  build-n-publish:
+ needs: [test-pytest,test-style] # only runs if tests are passing
+ if: startsWith(github.ref, 'refs/tags/v') # Check if the tag starts with 'v'
  name: Build and publish to PyPI
  runs-on: ubuntu-latest
 
@@ -41,7 +81,7 @@ jobs:
  tag_name: ${{ github.ref }}
  release_name: ${{ github.ref }}
  draft: false
- prerelease: false
+ prerelease: true
 
  - name: Get Asset name
  run: |

setup.py

@@ -34,6 +34,7 @@
  },
  include_package_data=True,
  install_requires=install_reqs,
+ extras_require={'test': ['pytest', 'pytest-cov','flake8'],}
  license='BSD 3-Clause',
  platforms='any',
  classifiers=[