new analyze.cc file #293
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| name: macos-ci | |
| on: | |
| schedule: | |
| # Every Monday at 3 am | |
| - cron: '0 3 * * 1' | |
| push: | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| build: | |
| strategy: | |
| matrix: | |
| os: [macos-11] | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 25 | |
| steps: | |
| - name: Checkout HIV_malawi repository | |
| uses: actions/checkout@v2 | |
| - name: Make sure Xcode 13.1 is used on macOS 11.6 as the default /Application/Xcode.app | |
| shell: bash | |
| run: | | |
| sudo mv /Applications/Xcode.app /Applications/Xcode.app- | |
| sudo ln -s /Applications/Xcode_13.1.app /Applications/Xcode.app | |
| sudo xcode-select -s /Applications/Xcode.app/Contents/Developer | |
| if: matrix.os == 'macos-11' | |
| - name: Install dependencies | |
| run: | | |
| brew install libomp open-mpi [email protected] wget cmake ninja | |
| - name: Install BioDynaMo | |
| run: | | |
| cd .. | |
| git clone https://github.com/BioDynaMo/biodynamo.git | |
| cd biodynamo | |
| cmake -G Ninja \ | |
| -Dparaview=off \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -B build | |
| cmake --build build --parallel --config Release | |
| - name: Build hiv_malawi, run small simulation, and run tests | |
| run: | | |
| sed -i '' 's/uint64_t number_of_iterations = 60/uint64_t number_of_iterations = 3/g' src/sim-param.h | |
| . ../biodynamo/build/bin/thisbdm.sh | |
| bdm run | |
| bdm test |