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Add additional UCells
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bbimber committed May 31, 2024
1 parent ec2acb9 commit 3e74a67
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion R/Phenotyping.R
Original file line number Diff line number Diff line change
Expand Up @@ -301,7 +301,7 @@ GetGeneSet <- function(name) {

.RegisterGeneSet('Cytotoxicity.ABH', c('PRF1', 'GNLY', 'NKG7', 'GZMA','GZMB','GZMH'))
.RegisterGeneSet('Cytotoxicity.KM', c('GZMK','GZMM'))
.RegisterGeneSet('Metallothionein', c('MT1X', 'MT2A', 'MT1E'))
.RegisterGeneSet('Metallothionein', c('MT1A', 'MT1E', 'MT1M', 'MT1X', 'MT2A', 'MT1JP'))
.RegisterGeneSet('IEGs', c('FOS', 'JUN', 'ZFP36'))

.RegisterGeneSet('EffectorT', c('CCL4L1','CCL5','CCR7-','CD7-','FUOM-','GNLY','GZMB','GZMH','HOPX','LTB-','NKG7','PECAM1-','PRF1','RGS9','S100A4','SELL-','SPOCK2-','JUNB-'))
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