Update github action R and bioc versions (#122) #1185
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| name: Build Docker | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: | |
| - master | |
| repository_dispatch: | |
| types: [docker] | |
| jobs: | |
| generate: | |
| name: Build Docker | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout the repository | |
| uses: actions/checkout@v4 | |
| - name: Docker meta | |
| id: docker_meta | |
| uses: docker/metadata-action@v5 | |
| with: | |
| images: ghcr.io/bimberlab/rira | |
| tags: | | |
| type=semver,pattern={{version}} | |
| type=semver,pattern={{major}}.{{minor}} | |
| type=sha | |
| - name: Set up QEMU | |
| uses: docker/[email protected] | |
| - name: Set up Docker Buildx | |
| uses: docker/[email protected] | |
| with: | |
| # Use the previous version of buildx to force docker to save a V1 image, | |
| # since Exacloud's outdated docker version cannot handle V2/OCI: | |
| version: v0.9.1 | |
| - name: Login to GitHub Container Registry | |
| if: github.event_name != 'pull_request' | |
| uses: docker/[email protected] | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.PAT }} | |
| - name: Build and push | |
| id: docker_build | |
| uses: docker/[email protected] | |
| with: | |
| context: . | |
| file: ./Dockerfile | |
| build-args: | | |
| "GH_PAT=${{ secrets.PAT }}" | |
| pull: true | |
| push: ${{github.ref == 'refs/heads/master'}} | |
| tags: ghcr.io/bimberlab/rira:nightly,ghcr.io/bimberlab/rira:latest | |
| labels: | | |
| ${{ steps.docker_meta.outputs.labels }} | |
| org.opencontainers.image.title=rira | |
| org.opencontainers.image.description=RIRA is an R package for interpreting single-cell RNA-seq data, developed and maintained by the Bimber Lab. | |