Skip to content

Australian BioCommons ToolFinder and WorkflowFinder: contains tool and workflow install status

License

Notifications You must be signed in to change notification settings

AustralianBioCommons/australianbiocommons.github.io

Repository files navigation

ToolFinder and WorkflowFinder

This repository contains structured documentation for the following BioCommons services:


Attributions

This work is supported by the Australian BioCommons via funding from Bioplatforms Australia, the Australian Research Data Commons (https://doi.org/10.47486/PL105) and the Queensland Government RICF programme. Bioplatforms Australia and the Australian Research Data Commons are funded by the National Collaborative Research Infrastructure Strategy (NCRIS).

Tool metadata is sourced from bio.tools where possible

Ison, J. et al. (2015). Tools and data services registry: a community effort to document bioinformatics resources. Nucleic Acids Research. DOI

bio.tools API

EDAM is used for tool list categorisation

Ison, J., Kalaš, M., Jonassen, I., Bolser, D., Uludag, M., McWilliam, H., Malone, J., Lopez, R., Pettifer, S. and Rice, P. 2013. EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats. Bioinformatics, 29(10): 1325-1332. DOI PMID: 23479348 Open Access

EDAM ontology GitHub