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Use ONT style for reading/writing fast5 data #55

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kdoroschak opened this issue Apr 30, 2020 · 0 comments
Open

Use ONT style for reading/writing fast5 data #55

kdoroschak opened this issue Apr 30, 2020 · 0 comments

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@kdoroschak
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Implement raw data writing using a similar strategy to fast5_research. We are already doing parts of this, but updating all of it to be as similar to ONT as possible is a good idea.

  • For reading strings: use np.char.decode()
  • For writing strings: my_string.encode()
  • For writing raw data: verify how they handle dtypes, especially for compound datasets
@kdoroschak kdoroschak added validation Verify code correctness and removed validation Verify code correctness labels Apr 30, 2020
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