-
Notifications
You must be signed in to change notification settings - Fork 0
152 lines (152 loc) · 5.3 KB
/
test.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
name: test
run-name: ${{ github.actor }} is running tests
on: [push]
jobs:
github-crawl-contents:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: rse-repo-study
environment-file: environment.yml
auto-activate-base: false
- run: conda info
- name: Setup personal access token
run: |
cp config_example.cfg config.cfg
sed -i "s/<your-access-token>/${{ secrets.TOKEN_TEST }}/" config.cfg
- name: Test crawling contents script
working-directory: ./src/github
run: python3 crawl_contents.py -f ../../data/debug/test_set.csv -n github_id -v
- run: ls -l data/
github-crawl-contributions:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: rse-repo-study
environment-file: environment.yml
auto-activate-base: false
- run: conda info
- name: Setup personal access token
run: |
cp config_example.cfg config.cfg
sed -i "s/<your-access-token>/${{ secrets.TOKEN_TEST }}/" config.cfg
- name: Test crawling contributions script
working-directory: ./src/github
run: python3 crawl_contributions.py -f ../../data/debug/test_set.csv -n github_id -v
- run: ls -l data/raw/github
github-crawl-engagement:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: rse-repo-study
environment-file: environment.yml
auto-activate-base: false
- run: conda info
- name: Setup personal access token
run: |
cp config_example.cfg config.cfg
sed -i "s/<your-access-token>/${{ secrets.TOKEN_TEST }}/" config.cfg
- name: Test crawling engagement script
working-directory: ./src/github
run: python3 crawl_engagement.py -f ../../data/debug/test_set.csv -n github_id -v
- run: ls -l data/raw/github
github-crawl-issues:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: rse-repo-study
environment-file: environment.yml
auto-activate-base: false
- run: conda info
- name: Setup personal access token
run: |
cp config_example.cfg config.cfg
sed -i "s/<your-access-token>/${{ secrets.TOKEN_TEST }}/" config.cfg
- name: Test crawling issues script
working-directory: ./src/github
run: python3 crawl_issues.py -f ../../data/debug/test_set.csv -n github_id -v
- run: ls -l data/raw/github
github-crawl-metadata:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: rse-repo-study
environment-file: environment.yml
auto-activate-base: false
- run: conda info
- name: Setup personal access token
run: |
cp config_example.cfg config.cfg
sed -i "s/<your-access-token>/${{ secrets.TOKEN_TEST }}/" config.cfg
- name: Test crawling issues script
working-directory: ./src/github
run: python3 crawl_metadata.py -f ../../data/debug/test_set.csv -n github_id -v
- run: ls -l data/raw/github
eprints-parse:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: rse-repo-study
environment-file: environment.yml
auto-activate-base: false
- run: conda info
- name: Setup personal access token
run: |
cp config_example.cfg config.cfg
sed -i "s/<your-access-token>/${{ secrets.TOKEN_TEST }}/" config.cfg
- name: Test parsing remote eprints
working-directory: ./src/eprints
run: python3 parse_eprints.py --repo eprints.soton.ac.uk --date 2022-2023 -v
- name: Test parsing PDFs
working-directory: ./src/eprints
run: python3 parse_pdfs.py --repo eprints.soton.ac.uk --date 2022-2023 --domain github.com -v
- name: Test cleaning links
working-directory: ./src/eprints
run: python3 clean_eprints_links.py --repo eprints.soton.ac.uk --date 2022-2023 --domain github.com -v
- run: ls -l data/raw/eprints
aggregate_data:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: rse-repo-study
environment-file: environment.yml
auto-activate-base: false
- name: Aggregate
working-directory: ./src/analysis
run: python3 aggregate_datasets.py -v
- run: ls -l data/derived