From 73ce4d78351d09e43431b4495524f8f1ddf84d5f Mon Sep 17 00:00:00 2001 From: robbisg Date: Thu, 25 Jul 2024 16:12:04 +0200 Subject: [PATCH] NF: removing and adding stuff --- .github/workflows/test.yaml | 4 ++-- .gitignore | 6 +++--- README.md | 6 ++++-- joss/paper.md | 4 ++-- pyproject.toml | 1 - 5 files changed, 11 insertions(+), 10 deletions(-) diff --git a/.github/workflows/test.yaml b/.github/workflows/test.yaml index e174fc2..11bcd9f 100644 --- a/.github/workflows/test.yaml +++ b/.github/workflows/test.yaml @@ -1,4 +1,4 @@ -name: pyitab +name: sekupy on: [push] @@ -48,7 +48,7 @@ jobs: # flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics - name: Test with pytest run: | - python -m pytest --pyargs pyitab --cov=pyitab + python -m pytest --pyargs sekupy --cov=sekupy - uses: codecov/codecov-action@v1 if: success() name: 'Upload coverage to CodeCov' diff --git a/.gitignore b/.gitignore index 2a354bf..9697305 100644 --- a/.gitignore +++ b/.gitignore @@ -19,8 +19,8 @@ junit-results.xml doc/source/*.doctree -pyitab/io/data/fmri/0_results/* -pyitab/io/data/fmri/derivatives/* -pyitab.egg-info/* +sekupy/io/data/fmri/0_results/* +sekupy/io/data/fmri/derivatives/* +sekupy.egg-info/* examples/ doc/source/_build/* diff --git a/README.md b/README.md index 1dff139..9fda24b 100644 --- a/README.md +++ b/README.md @@ -6,12 +6,14 @@ [![Project Status: WIP – Initial development is in progress, but there has not yet been a stable, usable release suitable for the public.](https://www.repostatus.org/badges/latest/wip.svg)](https://www.repostatus.org/#wip) [![CodeFactor](https://www.codefactor.io/repository/github/robbisg/sekupy/badge)](https://www.codefactor.io/repository/github/robbisg/sekupy) -`sekupy` is a python-package created for easing (multivariate) neuroimaging analysis. The package has been thought for +`sekupy` is a python-package created for deterging your (dirty) (and) (multivariate) neuroimaging analyses. The package has been thought for decoding analyses but it includes also basic univariate analyses. It has some utilities to vary sets of parameters of the analyses without struggling with `for` and `if` statements. -`sekupy` stands for Python at Institute for Advanced Biomedical Technologies (ITAB), which is part of University of Chieti-Pescara "G. D'Annunzio". +It deterges your results, by saving them in a safe manner, by also keeping in mind BIDS. + +`sekupy` is the deterged version of `pyitab`. # Documentation diff --git a/joss/paper.md b/joss/paper.md index d84914f..dbb1e20 100644 --- a/joss/paper.md +++ b/joss/paper.md @@ -1,5 +1,5 @@ --- -title: 'pyitab: a python package for multivariate pipelines of neuroimaging analyses' +title: 'sekupy: a python package for multivariate pipelines of neuroimaging analyses' tags: - Python - Pipelines @@ -28,7 +28,7 @@ bibliography: paper.bib ## Documentation -The package is accompanied by documentation (https://pyitab.readthedocs.io/en/latest/index.html) and a number of tutorial notebooks which serve as both guides to the package as well as educational resources. +The package is accompanied by documentation (https://sekupy.readthedocs.io/en/latest/index.html) and a number of tutorial notebooks which serve as both guides to the package as well as educational resources. # Conclusion diff --git a/pyproject.toml b/pyproject.toml index 4cc9240..41ea30b 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -46,7 +46,6 @@ dependencies = [ "pandas", "seaborn", "imbalanced-learn", - #"pymvpa2", "mne", "lazy_loader", "statsmodels",