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    15 repositories

    • plasmids

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 21, 2024Oct 21, 2024

    • ComMAND

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Oct 16, 2024Oct 16, 2024

    • idr

      Public
      IDR
      Python
      •
      GNU General Public License v2.0
      •46•0•0•0•Updated Oct 10, 2024Oct 10, 2024

    • protocols

      Public
      Collected GallowayLab protocols
      Python
      •
      Other
      •0•0•17•0•Updated Sep 25, 2024Sep 25, 2024

    • rushd

      Public
      Package for maintaining robust, reproducible data management
      Python
      •
      MIT License
      •0•0•11•0•Updated Aug 15, 2024Aug 15, 2024

    • labbot

      Public
      Python
      •
      MIT License
      •0•0•7•1•Updated Aug 28, 2023Aug 28, 2023

    • snakepipes

      Public
      Customizable workflows based on snakemake and python for the analysis of NGS data
      Python
      •
      MIT License
      •85•0•0•0•Updated Jun 12, 2023Jun 12, 2023

    • cold_backups

      Public
      Python
      •0•0•0•0•Updated Jan 31, 2023Jan 31, 2023

    • CellBaum

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jan 11, 2023Jan 11, 2023

    • tangles_model

      Public
      Code for simulating user-defined gene circuits under the influence of supercoiling-mediated feedback
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Sep 7, 2022Sep 7, 2022

    • kfm

      Public
      Keyence file manager
      Python
      •
      MIT License
      •0•0•0•0•Updated Jan 18, 2022Jan 18, 2022

    • zstacker

      Public
      Utility function to convert z-stack of images into an OpenVDB file format
      C++
      •
      MIT License
      •1•3•3•0•Updated Feb 4, 2021Feb 4, 2021

    • synbio_reprogram_review_figs

      Public
      Figures for "Engineering cell fate: Applying synthetic biology to cellular reprogramming", https://doi.org/10.1016/j.coisb.2020.09.002
      Creative Commons Attribution 4.0 International
      •0•0•0•0•Updated Dec 31, 2020Dec 31, 2020

    • cds_review_figures

      Public
      Nuclear architecture figures
      Creative Commons Attribution 4.0 International
      •0•0•0•0•Updated Nov 18, 2020Nov 18, 2020

    • ORCA-public

      Public
      Fork of the Boettiger lab ORCA code
      MATLAB
      •4•0•0•0•Updated Apr 28, 2020Apr 28, 2020