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go in R question about baseMean filtering #14

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karenbobier opened this issue Mar 20, 2023 · 0 comments
Open

go in R question about baseMean filtering #14

karenbobier opened this issue Mar 20, 2023 · 0 comments

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@karenbobier
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I am curious why you are filtering the expression data to only include genes with a base mean over 50? I have not really seen this as a step in other tutorials.

from GO_in_R.Rmd
sigs <- sigs[sigs$padj < 0.05 & sigs$baseMean > 50,]

thanks!
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@karenbobier