README.md

Relation Extraction on BC5CDR

Data

You can process the data by:

bash preprocess.sh

Training

You can fine-tune the pre-trained BioGPT on the task by:

bash train.sh

Model Checkpoint

We provide our fine-tuned model on the task. See here

Inference and Evaluating

You can inference and evalaute the model on the test set by:

bash infer.sh