diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index bc5aaef..92274d2 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -47,3 +47,5 @@ jobs: - name: Ruff uses: chartboost/ruff-action@v1 + with: + args: --select W diff --git a/woltka/align.py b/woltka/align.py index cee87e2..0ce7d29 100644 --- a/woltka/align.py +++ b/woltka/align.py @@ -70,7 +70,7 @@ def plain_mapper(fh, fmt=None, n=1000): target = n # target line number at end of current chunk # parse alignment file - for i, (query, subject) in enumerate(parser(chain(iter(head), fh))): + for i, (query, subject) in enumerate(parser(chain(iter(head), fh))): # add subject to subject set of the same query Id if query == this: