We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
print_types=True
It's OK In prod (e.g. here https://docs.lamin.ai/scrna#populate-metadata-registries-based-on-an-artifact)
I just saw it in a notebook from @sunnyosun
The text was updated successfully, but these errors were encountered:
Artifact(uid='kOUejI4cVj3rHcOG0000', is_latest=True, description='mock AnnData', suffix='.h5ad', type='dataset', size=20336, hash='8z6kAdTVBaDIDuA6aivzNg', n_observations=3, _hash_type='md5', _accessor='AnnData', visibility=1, _key_is_virtual=True, created_at=2024-10-22 19:44:26 UTC) Provenance .storage: Storage = 's3://lamin-us-west-2/6uvjeXbzpPH2' .transform: Transform = 'Curate datasets' .run: Run = '2024-10-22 19:37:01 UTC' .created_by: User = 'sunnyosun' Labels .cell_types: CellType Simple fields .uid: CharField .name: CharField .ontology_id: CharField .abbr: CharField .synonyms: TextField .description: TextField .created_at: DateTimeField .updated_at: DateTimeField Relational fields .created_by: User .run: Run .source: bionty.Source .parents: bionty.CellType .artifacts: Artifact Bionty fields .children: bionty.CellType = 'astrocyte', 'cerebral cortex pyramidal neuron', 'oligodendrocyte' .experimental_factors: ExperimentalFactor Simple fields .uid: CharField .name: CharField .ontology_id: CharField .abbr: CharField .synonyms: TextField .description: TextField .molecule: TextField .instrument: TextField .measurement: TextField .created_at: DateTimeField .updated_at: DateTimeField Relational fields .created_by: User .run: Run .source: bionty.Source .parents: bionty.ExperimentalFactor .artifacts: Artifact Bionty fields .children: bionty.ExperimentalFactor = 'single-cell RNA sequencing' .ulabels: ULabel Simple fields .uid: CharField .name: CharField .description: TextField .reference: CharField .reference_type: CharField .created_at: DateTimeField .updated_at: DateTimeField Relational fields .created_by: User .run: Run .parents: ULabel .transforms: Transform .children: ULabel .artifacts: Artifact .collections: Collection = 'D0001', 'D0002', 'D0003' Features 'assay_ontology_id': cat[bionty.ExperimentalFactor] = 'single-cell RNA sequencing' 'cell_type': cat[bionty.CellType] = 'astrocyte', 'cerebral cortex pyramidal neuron', 'oligodendrocyte' 'donor': cat[ULabel] = 'D0001', 'D0002', 'D0003' Feature sets 'var' = 'CD4', 'TCF7', 'CD8A', 'CD3E', 'PDCD1' 'obs' = 'cell_type', 'assay_ontology_id', 'donor'
Sorry, something went wrong.
No branches or pull requests
It's OK In prod (e.g. here https://docs.lamin.ai/scrna#populate-metadata-registries-based-on-an-artifact)
I just saw it in a notebook from @sunnyosun
The text was updated successfully, but these errors were encountered: