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Hi Guys,
Since klustaviewa is not working for me anymore, I switched to phy. You normally get kwik file to Klustvieawa, then do manual spike sorting, then your output is saved to a clue file in the same directory. But For phy I don't see a clue file or even a cvs file.
It would be greatly appreciated if you could help urgently. Thank you :)
I copied part of phy.log
I am not sure if this is the problem? /home/ozdas/Downloads/.phy/hybrid_10sec/main/0/new_cluster_id.json doesn't exist.
Hi Guys,
Since klustaviewa is not working for me anymore, I switched to phy. You normally get kwik file to Klustvieawa, then do manual spike sorting, then your output is saved to a clue file in the same directory. But For phy I don't see a clue file or even a cvs file.
It would be greatly appreciated if you could help urgently. Thank you :)
I copied part of phy.log
I am not sure if this is the problem?
/home/ozdas/Downloads/.phy/hybrid_10sec/main/0/new_cluster_id.json
doesn't exist.2019-02-23 17:48:55 [D] model:671 Enable waveform filter.
2019-02-23 17:48:55 [D] model:467 Loading traces: hybrid_10sec.dat
2019-02-23 17:48:55 [D] model:1067 Kwik file
/home/ozdas/Downloads/hybrid_10sec.kwik
loaded.2019-02-23 17:48:55 [D] context:35 Create cache directory
/home/ozdas/Downloads/.phy/hybrid_10sec/main/0
.2019-02-23 17:48:55 [D] context:56 Initialize joblib cache dir at
/home/ozdas/Downloads/.phy/hybrid_10sec/main/0
.2019-02-23 17:48:55 [D] context:128 The file
/home/ozdas/Downloads/.phy/hybrid_10sec/main/0/new_cluster_id.json
doesn't exist.2019-02-23 17:48:55 [D] config:46 Load config file
/home/ozdas/.phy/phy_config.py
.2019-02-23 17:48:55 [D] gui:428 Load the GUI state from
/home/ozdas/.phy/KwikGUI/state.json
.2019-02-23 17:48:55 [D] utils:51 Get box size for 32 points.
2019-02-23 17:48:56 [D] gui:171 Load the geometry state.
2019-02-23 17:49:00 [D] gui_component:393 Select clusters: 6.
2019-02-23 17:49:01 [D] gui_component:393 Select clusters: 4.
2019-02-23 17:49:05 [D] gui_component:393 Select clusters: 4.
2019-02-23 17:49:07 [I] gui_component:219 Change metadata_group for clusters 4 to good.
2019-02-23 17:49:07 [D] gui_component:462 Get next_cluster for 4: None.
2019-02-23 17:49:07 [D] gui_component:393 Select clusters: 6.
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