From 24ffe1ca1f325586da2587dab8a8af2a509f8f50 Mon Sep 17 00:00:00 2001 From: martinghunt Date: Fri, 26 Apr 2024 14:34:31 +0100 Subject: [PATCH] rename viridian workflow to viridian --- README.md | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index 047c0dd..3dcf91c 100644 --- a/README.md +++ b/README.md @@ -1,10 +1,10 @@ -![Build Status](https://github.com/iqbal-lab-org/viridian_workflow/actions/workflows/build.yaml/badge.svg) +![Build Status](https://github.com/iqbal-lab-org/viridian/actions/workflows/build.yaml/badge.svg) -# Viridian Workflow +# Viridian Ultra-careful amplicon-aware viral assembly for tiled amplicon schemes. -Please see the [Viridian Workflow Wiki](https://github.com/iqbal-lab-org/viridian_workflow/wiki) +Please see the [Viridian Wiki](https://github.com/iqbal-lab-org/viridian/wiki) for full documentation. ## Installation @@ -77,7 +77,7 @@ The default files in the output directory are: * `variants.vcf`: a VCF file of the identified variants between the consensus sequence and the reference genome. * `log.json.gz`: a gzipped JSON file that contains logging information - for the viridian workflow run. + for the viridian run. * `qc.tsv.gz`: a gzipped tab-delimited file of per-base QC information * `scheme_id.depth_across_genome.pdf`: a plot of the read depth across the genome, with amplicons coloured in the background.