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New clockwork step for combining callsets and regenotyping all samples #19

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iqbal-lab opened this issue Feb 23, 2018 · 0 comments
Open

New clockwork step for combining callsets and regenotyping all samples #19

iqbal-lab opened this issue Feb 23, 2018 · 0 comments
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enhancement New feature or request

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Two steps

  1. Combine all SNP/indels into a PRG, genotype all samples, get haplotypes
  2. Now make a new PRG with long indels and haplotypes from step1 , and genotype all
@iqbal-lab iqbal-lab assigned iqbal-lab and unassigned martinghunt Jun 7, 2019
@iqbal-lab iqbal-lab added the enhancement New feature or request label Jun 7, 2019
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@martinghunt @iqbal-lab