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Seeming mistake in DESeq2 dispersion definition #35

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sam-israel opened this issue Mar 9, 2021 · 0 comments
Open

Seeming mistake in DESeq2 dispersion definition #35

sam-israel opened this issue Mar 9, 2021 · 0 comments
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@sam-israel
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https://github.com/hbctraining/DGE_workshop/blob/master/lessons/04_DGE_DESeq2_analysis.md

says

" For genes with moderate to high count values, the square root of dispersion will be equal to the coefficient of variation (Var / μ) "
Whereas it should be SD / μ.

(Judging by the formula Var = μ + α*μ^2)

@jihe-liu jihe-liu self-assigned this Mar 15, 2021
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