diff --git a/_docs/download-go-annotations.md b/_docs/download-go-annotations.md index ab848944..c4754061 100644 --- a/_docs/download-go-annotations.md +++ b/_docs/download-go-annotations.md @@ -9,20 +9,20 @@ redirect_from: # Download annotations -## GO annotation formats -+ Released monthly -+ Taxon-specific -+ Available formats: - + [GAF format](/docs/go-annotation-file-gaf-format-2.1/) - + [GPAD](/docs/gene-product-association-data-gpad-format/) + [GPI](/docs/gene-product-information-gpi-format/) - -## GO annotation download links -GAF files by species can be browsed and obtained from the [GAF download page](http://current.geneontology.org/products/pages/downloads.html) +GAF files by species can be found at [GAF download page](http://current.geneontology.org/products/pages/downloads.html) + +GAF, GPAD and GPI files are also available from the [/annotations/](http://current.geneontology.org/annotations/index.html){:target="blank"} directory of the current release: [http://current.geneontology.org](http://current.geneontology.org){:target="blank"} -GAF, GPAD and GPI files are also available from the [/annotations/](http://current.geneontology.org/annotations/index.html){:target="blank"} of the current release on [http://current.geneontology.org](http://current.geneontology.org){:target="blank"} +Downloading annotations by specific taxon is possible through [AmiGO](http://amigo.geneontology.org/amigo/search/annotation) + +## Annotation files: General information ++ Released monthly ++ File format guides: + + [GAF](/docs/go-annotation-file-gaf-format-2.1/): GO Annotation Files are tab-delimited text files that are human-friendly (in addition to machine-readable) + + [GPAD](/docs/gene-product-association-data-gpad-format/) + [GPI](/docs/gene-product-information-gpi-format/) companion files: Gene Product Association Data (GPAD) files are intended to work in conjunction with a Gene Product Information (GPI) file ## Programmatic access to GO annotations As for any resource in GO, GO annotations are accessible through the DOI-versioned release stored in [Zenodo](https://doi.org/10.5281/zenodo.1205159){:target="blank"} and can be retrieved using BDBag. Read more about [programmatic access](/docs/tools-guide/#programmatic-download-bdbag). ## Error or omission ? -Any errors or omissions in annotations should be reported by writing to the [GO helpdesk](http://help.geneontology.org/){:target="blank"} \ No newline at end of file +Any errors or omissions in annotations should be reported by writing to the [GO helpdesk](http://help.geneontology.org/){:target="blank"}