| layout | venue | address | country | language | latitude | longitude | humandate | humantime | startdate | enddate | instructor | helper | collaborative_notes | eventbrite | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
workshop |
University of Edinburgh |
Digital Scholarship Centre located on Floor 6 of UoE Library. |
gb |
en |
55.94274252664739 |
-3.1894681464603725 |
11-12 June 2024 |
10 am - 5 pm |
2024-06-11 |
2024-06-12 |
|
|
{% comment %} See instructions in the comments below for how to edit specific sections of this workshop template. {% endcomment %}
{% comment %} HEADER
Edit the values in the block above to be appropriate for your workshop. If the value is not 'true', 'false', 'null', or a number, please use double quotation marks around the value, unless specified otherwise. And run 'make workshop-check' before committing to make sure that changes are good. {% endcomment %}
High-Dimensional Statistics with R
This course is intended for those who have a working knowledge of statistics and linear models with R and wish to learn high-dimensional statistical methods with R.
This is a short course aimed at familiarising learners with statistical and computational methods for the extremely high-dimensional data commonly found in biomedical and health sciences (e.g., gene expression, DNA methylation, health records). These datasets can be challenging to approach, as they often contain many more features than observations, and it can be difficult to distinguish meaningful patterns from natural underlying variability. To this end, we will introduce and explain a range of methods and approaches to disentangle these patterns from natural variability. After completion of this course, learners will be able to understand, apply, and critically analyse a broad range of statistical methods. In particular, we focus on providing a strong grounding in high-dimensional regression, dimensionality reduction, and clustering.
Ed-DaSH
Ed-DaSH is a Data Science training programme for Health and Biosciences. The team has developed workshops using The Carpentries platform on the following topics. See workshops for dates and registration details. This ED-DaSH workshop has been adopted into the Edinburgh Carpentries DUSC programme.
{% comment %} EVENTBRITE
This block includes the Eventbrite registration widget if 'eventbrite' has been set in the header. You can delete it if you are not using Eventbrite, or leave it in, since it will not be displayed if the 'eventbrite' field in the header is not set. {% endcomment %} {% if page.eventbrite %} Some adblockers block the registration window. If you do not see the registration box below, please check your adblocker settings.
<iframe src="https://www.eventbrite.com/tickets-external?eid={{page.eventbrite}}&ref=etckt" frameborder="0" width="100%" height="280px" scrolling="auto"> </iframe> {% endif %}{% comment %} LOCATION
This block displays the address and links to maps showing directions if the latitude and longitude of the workshop have been set. You can use https://itouchmap.com/latlong.html to find the lat/long of an address. {% endcomment %} {% assign begin_address = page.address | slice: 0, 4 | downcase %} {% if page.address == "online" %} {% assign online = "true_private" %} {% elsif begin_address contains "http" %} {% assign online = "true_public" %} {% else %} {% assign online = "false" %} {% endif %} {% if page.latitude and page.longitude and online == "false" %}
Where: {{page.address}}. Get directions with OpenStreetMap or Google Maps.
{% elsif online == "true_public" %}Where: online at {{page.address}}. If you need a password or other information to access the training, the instructor will pass it on to you before the workshop.
{% elsif online == "true_private" %}Where: This training will take place online. The instructors will provide you with the information you will need to connect to this meeting.
{% endif %}{% comment %} DATE
This block displays the date and links to Google Calendar. {% endcomment %} {% if page.humandate %}
When: {{page.humandate}}. {% include workshop_calendar.html %}
{% endif %}{% comment %} SPECIAL REQUIREMENTS
Modify the block below if there are any special requirements. {% endcomment %}
Requirements: {% if online == "false" %} Participants must bring a laptop with a Mac, Linux, or Windows operating system (not a tablet, Chromebook, etc.) that they have administrative privileges on. {% else %} Participants must have access to a computer with a Mac, Linux, or Windows operating system (not a tablet, Chromebook, etc.) that they have administrative privileges on. {% endif %} They should have a few specific software packages installed (listed below).
{% comment %} ACCESSIBILITY
Modify the block below if there are any barriers to accessibility or special instructions. {% endcomment %}
Accessibility: {% if online == "false" %} We are committed to making this workshop accessible to everybody. The workshop organizers have checked that:
- The room is wheelchair / scooter accessible.
- Accessible restrooms are available.
Materials will be provided in advance of the workshop and large-print handouts are available if needed by notifying the organizers in advance. If we can help making learning easier for you (e.g. sign-language interpreters, lactation facilities) please get in touch (using contact details below) and we will attempt to provide them.
{% else %} We are dedicated to providing a positive and accessible learning environment for all. Please notify the instructors in advance of the workshop if you require any accommodations or if there is anything we can do to make this workshop more accessible to you. {% endif %}{% comment %} CONTACT EMAIL ADDRESS
Display the contact email address set in the configuration file. {% endcomment %}
Contact: Please email {% if page.email %} {% for email in page.email %} {% if forloop.last and page.email.size > 1 %} or {% else %} {% unless forloop.first %} , {% endunless %} {% endif %} {{email}} {% endfor %} {% else %} to-be-announced {% endif %} for more information.
Roles: To learn more about the roles at the workshop (who will be doing what), refer to our Workshop FAQ.
{% comment %} WHO CAN ATTEND?
If you would like to specify who can attend the workshop, you can use the section below.
Move the 'endcomment' tag above the beginning of the following
tag to make this section visible.
Edit the text to match who can attend the workshop. For instance:
- This workshop is open to affiliates to ABC university.
- This workshop is open to the public.
- If you are interested in attending this workshop, contact [email protected] for more information
Who can attend?: This workshop is open to ....
{% endcomment %}{% comment%} CODE OF CONDUCT {% endcomment %}
Everyone who participates in Carpentries activities is required to conform to the Code of Conduct. This document also outlines how to report an incident if needed.
Report a Code of Conduct Incident
{% comment %} Collaborative Notes
If you want to use an Etherpad, go to
https://pad.carpentries.org/YYYY-MM-DD-site
where 'YYYY-MM-DD-site' is the identifier for your workshop, e.g., '2015-06-10-esu'.
Note we also have a CodiMD (the open-source version of HackMD) available at https://codimd.carpentries.org {% endcomment %} {% if page.collaborative_notes %}
We will use this collaborative document for chatting, taking notes, and sharing URLs and bits of code.
{% endif %}
{% comment %} SCHEDULE
Show the workshop's schedule.
Small changes to the schedule can be made by modifying the
schedule.html found in the _includes folder for your
workshop type (swc, lc, or dc). Edit the items and
times in the table to match your plans. You may also want to
change 'Day 1' and 'Day 2' to be actual dates or days of the
week.
For larger changes, a blank template for a 4-day workshop
(useful for online teaching for instance) can be found in
_includes/custom-schedule.html. Add the times, and what
you will be teaching to this file. You may also want to add
rows to the table if you wish to break down the schedule
further. To use this custom schedule here, replace the block
of code below the Schedule <h2> header below with
{% include custom-schedule.html %}.
{% endcomment %}
{% if site.carpentry == "swc" %} {% include swc/schedule.html %} {% elsif site.carpentry == "dc" %} {% include dc/schedule.html %} {% elsif site.carpentry == "lc" %} {% include lc/schedule.html %} {% elsif site.carpentry == "pilot" %}
The lesson taught in this workshop is being piloted and a precise schedule is yet to be established.
{% include custom-schedule.html %}
{% comment %} The lesson taught in this workshop is being piloted and a precise schedule is yet to be established. The workshop will include regular breaks. If you would like to know the timing of these breaks in advance, please contact the workshop organisers. For a list of lesson sections and estimated timings, [visit the lesson homepage]({{ site.lesson_site }}). Edit/replace the text above if you want to include a schedule table. See the contents of the _includes/custom-schedule.html file for an example of how one of these schedule tables is constructed. {% endcomment %} {% endif %}
{% comment %} SETUP
Delete irrelevant sections from the setup instructions. Each section is inside a 'div' without any classes to make the beginning and end easier to find.
This is the other place where people frequently make mistakes, so please preview your site before committing, and make sure to run 'tools/check' as well. {% endcomment %}
To participate in a {% if site.carpentry == "swc" %} Software Carpentry {% elsif site.carpentry == "dc" %} Data Carpentry {% elsif site.carpentry == "lc" %} Library Carpentry {% endif %} workshop, you will need access to software as described below. In addition, you will need an up-to-date web browser.
We maintain a list of common issues that occur during installation as a reference for instructors that may be useful on the Configuration Problems and Solutions wiki page.
{% comment %} For online workshops, the section below provides:
- installation instructions for the Zoom client
- recommendations for setting up Learners' workspace so they can follow along the instructions and the videoconferencing
If you do not use Zoom for your online workshop, edit the file
_includes/install_instructions/videoconferencing.html
to include the relevant installation instrucctions.
{% endcomment %}
{% if online != "false" %}
{% include install_instructions/videoconferencing.html %}
{% endif %}
{% comment %} These are the installation instructions for the tools used during the workshop. {% endcomment %}
{% if site.carpentry == "swc" %} {% include swc/setup.html %} {% elsif site.carpentry == "dc" %} {% include dc/setup.html %} {% elsif site.carpentry == "lc" %} {% include lc/setup.html %} {% elsif site.carpentry == "pilot" %} Please check the "Setup" page of [the lesson site]({{ site.lesson_site }}) for instructions to follow to obtain the software and data you will need to follow the lesson. {% endif %}