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The above code runs for 1 iteration and then gives the following error:
6 errors detected in the compilation of "cupy_jitify_exercise".
RuntimeError Traceback (most recent call last)
Cell In[80], line 3
1 CUPY_DUMP_CUDA_SOURCE_ON_ERROR =1
2 CUPY_DISABLE_JITIFY_CACHE = 1
----> 3 model.fit(min_iter=30, max_iter=35)
4 model.plot_convergence()
File ~/anaconda3/envs/scenvi/lib/python3.9/site-packages/SEACells/core.py:587, in SEACells.fit(self, max_iter, min_iter, initial_archetypes)
585 if max_iter < min_iter:
586 raise ValueError("The maximum number of iterations specified is lower than the minimum number of iterations specified.")
--> 587 self._fit(max_iter=max_iter, min_iter=min_iter, initial_archetypes=initial_archetypes, initial_assignments=None)
File ~/anaconda3/envs/scenvi/lib/python3.9/site-packages/SEACells/core.py:544, in SEACells._fit(self, max_iter, min_iter, initial_archetypes, initial_assignments)
532 def _fit(self, max_iter: int = 50, min_iter:int=10, initial_archetypes=None, initial_assignments=None):
533 """
534 Compute archetypes and loadings given kernel matrix K. Iteratively updates A and B matrices until maximum
535 number of iterations or convergence has been achieved.
(...)
542
543 """
--> 544 self.initialize(initial_archetypes=initial_archetypes, initial_assignments=initial_assignments)
546 converged = False
547 n_iter = 0
...
File cupy/cuda/jitify.pyx:192, in cupy.cuda.jitify._init_cupy_headers_from_scratch()
File cupy/cuda/jitify.pyx:264, in cupy.cuda.jitify.jitify()
RuntimeError: Runtime compilation failed
I have tried multiple things and have even tried rebuilding my anaconda venv, but unable to fix this, it would be really helpful if someone could help with the same.
The text was updated successfully, but these errors were encountered:
I am facing some cupy cuda error while running the following code:
The above code runs for 1 iteration and then gives the following error:
I have tried multiple things and have even tried rebuilding my anaconda venv, but unable to fix this, it would be really helpful if someone could help with the same.
The text was updated successfully, but these errors were encountered: