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wonder why the @parm ceiling can be set to 10^9 #54

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chenc327 opened this issue Nov 2, 2023 · 0 comments
Open

wonder why the @parm ceiling can be set to 10^9 #54

chenc327 opened this issue Nov 2, 2023 · 0 comments

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@chenc327
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chenc327 commented Nov 2, 2023

Thanks for develop such a powerful tools！
But now Im wondering why the ceiling can be set to 10^9. Its far away with the default setting 4. AND this parm is used to prevent large biases in peak counts.
https://github.com/dpeerlab/SEACells/blob/3462c624ffae0df6d3930490f345f00196c3503e/notebooks/ArchR/ArchR-preprocessing-nfr-peaks.R#L67C9-L67C22
sorry for the bother， but it is little confusing
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