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PRINSEQ: PReprocessing and INformation of SEQuence data (http://prinseq.sourceforge.net)
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- tRNAscan-SE 2.0 https://doi.org/10.1093/nar/gkab688
- Aragorn https://doi.org/10.1093/nar/gkh152
- Diamond https://doi.org/10.1038/s41592-021-01101-x
- BLAST+ https://doi.org/10.1186/1471-2105-10-421
- HMMER https://doi.org/10.1371/journal.pcbi.1002195
- UniProt: https://doi.org/10.1093/nar/gky1049
- RefSeq: https://doi.org/10.1093/nar/gkx1068
- COG: https://doi.org/10.1093/bib/bbx117
- KEGG: https://doi.org/10.1093/bioinformatics/btz859
- Pfam: https://doi.org/10.1093/nar/gky995
- VFDB: https://doi.org/10.1093/nar/gky1080
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