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poetry.lock
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# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand.
[[package]]
name = "altair"
version = "5.2.0"
description = "Vega-Altair: A declarative statistical visualization library for Python."
optional = false
python-versions = ">=3.8"
files = [
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jinja2 = "*"
jsonschema = ">=3.0"
numpy = "*"
packaging = "*"
pandas = ">=0.25"
toolz = "*"
typing-extensions = {version = ">=4.0.1", markers = "python_version < \"3.11\""}
[package.extras]
dev = ["anywidget", "geopandas", "hatch", "ipython", "m2r", "mypy", "pandas-stubs", "pyarrow (>=11)", "pytest", "pytest-cov", "ruff (>=0.1.3)", "types-jsonschema", "types-setuptools", "vega-datasets", "vegafusion[embed] (>=1.4.0)", "vl-convert-python (>=1.1.0)"]
doc = ["docutils", "jinja2", "myst-parser", "numpydoc", "pillow (>=9,<10)", "pydata-sphinx-theme (>=0.14.1)", "scipy", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinxext-altair"]
[[package]]
name = "annotated-types"
version = "0.6.0"
description = "Reusable constraint types to use with typing.Annotated"
optional = false
python-versions = ">=3.8"
files = [
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]
[[package]]
name = "anyio"
version = "4.3.0"
description = "High level compatibility layer for multiple asynchronous event loop implementations"
optional = false
python-versions = ">=3.8"
files = [
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[package.dependencies]
exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""}
idna = ">=2.8"
sniffio = ">=1.1"
typing-extensions = {version = ">=4.1", markers = "python_version < \"3.11\""}
[package.extras]
doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"]
test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"]
trio = ["trio (>=0.23)"]
[[package]]
name = "appdirs"
version = "1.4.4"
description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
optional = false
python-versions = "*"
files = [
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]
[[package]]
name = "appnope"
version = "0.1.4"
description = "Disable App Nap on macOS >= 10.9"
optional = false
python-versions = ">=3.6"
files = [
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[[package]]
name = "asttokens"
version = "2.4.1"
description = "Annotate AST trees with source code positions"
optional = false
python-versions = "*"
files = [
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six = ">=1.12.0"
[package.extras]
astroid = ["astroid (>=1,<2)", "astroid (>=2,<4)"]
test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"]
[[package]]
name = "attrs"
version = "23.2.0"
description = "Classes Without Boilerplate"
optional = false
python-versions = ">=3.7"
files = [
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{file = "attrs-23.2.0.tar.gz", hash = "sha256:935dc3b529c262f6cf76e50877d35a4bd3c1de194fd41f47a2b7ae8f19971f30"},
]
[package.extras]
cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
dev = ["attrs[tests]", "pre-commit"]
docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"]
tests = ["attrs[tests-no-zope]", "zope-interface"]
tests-mypy = ["mypy (>=1.6)", "pytest-mypy-plugins"]
tests-no-zope = ["attrs[tests-mypy]", "cloudpickle", "hypothesis", "pympler", "pytest (>=4.3.0)", "pytest-xdist[psutil]"]
[[package]]
name = "backoff"
version = "2.2.1"
description = "Function decoration for backoff and retry"
optional = false
python-versions = ">=3.7,<4.0"
files = [
{file = "backoff-2.2.1-py3-none-any.whl", hash = "sha256:63579f9a0628e06278f7e47b7d7d5b6ce20dc65c5e96a6f3ca99a6adca0396e8"},
{file = "backoff-2.2.1.tar.gz", hash = "sha256:03f829f5bb1923180821643f8753b0502c3b682293992485b0eef2807afa5cba"},
]
[[package]]
name = "bio"
version = "1.6.2"
description = "bio"
optional = false
python-versions = ">=3.7"
files = [
{file = "bio-1.6.2-py3-none-any.whl", hash = "sha256:dcec8207f3993a7f41bd8205cde235218da3dc008175ae7bb7468276d8dacf71"},
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[package.dependencies]
biopython = ">=1.80"
gprofiler-official = "*"
mygene = "*"
pandas = "*"
pooch = "*"
requests = "*"
tqdm = "*"
[[package]]
name = "biopython"
version = "1.83"
description = "Freely available tools for computational molecular biology."
optional = false
python-versions = ">=3.8"
files = [
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numpy = "*"
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name = "biothings-client"
version = "0.3.1"
description = "Python Client for BioThings API services."
optional = false
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