Skip to content

Actions: cumc-dbmi/cehrbert

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
197 workflow runs
197 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

we only add a new value to the running stat if the value is between t… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #39: Commit e4c47c2 pushed by ChaoPang
September 12, 2024 21:13 23s bound_numeric_values
bound_numeric_values
September 12, 2024 21:13 23s
added the lab value lower/upper bounds to the tokenizer so we can bou… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #38: Commit af2db54 pushed by ChaoPang
September 12, 2024 21:07 23s bound_numeric_values
bound_numeric_values
September 12, 2024 21:07 23s
added RunningStatistics to remove the extreme outliers when calculati… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #37: Commit 75cca56 pushed by ChaoPang
September 12, 2024 20:22 23s bound_numeric_values
bound_numeric_values
September 12, 2024 20:22 23s
added patient_id to the pretraining data for debugging Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #36: Commit 34b16d8 pushed by ChaoPang
September 12, 2024 17:52 25s bound_numeric_values
bound_numeric_values
September 12, 2024 17:52 25s
added patient_id to the pretraining data for debugging Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #35: Commit 0bfdc39 pushed by ChaoPang
September 12, 2024 14:08 28s bound_numeric_values
bound_numeric_values
September 12, 2024 14:08 28s
tested masking lab values independent of MLM Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #34: Commit 1ab268c pushed by ChaoPang
September 12, 2024 00:25 26s mlm_with_value_prediction
mlm_with_value_prediction
September 12, 2024 00:25 26s
tested masking lab values independent of MLM Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #33: Commit 235e61f pushed by ChaoPang
September 12, 2024 00:24 30s mlm_with_value_prediction
mlm_with_value_prediction
September 12, 2024 00:24 30s
added LayerNorm to ConceptValuePredictionLayer to stablize the learning Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #32: Commit fd52c62 pushed by ChaoPang
September 11, 2024 20:33 29s mlm_with_value_prediction
mlm_with_value_prediction
September 11, 2024 20:33 29s
added gelu_new at the end of the ConceptValuePredictionLayer Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #31: Commit c5cbbd3 pushed by ChaoPang
September 11, 2024 20:23 25s mlm_with_value_prediction
mlm_with_value_prediction
September 11, 2024 20:23 25s
fixed a bug in calculating the MLM value prediction, where the num_it… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #30: Commit a77b216 pushed by ChaoPang
September 11, 2024 20:11 31s mlm_with_value_prediction
mlm_with_value_prediction
September 11, 2024 20:11 31s
Update test prediction columns (#56) Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #29: Commit 9ecaca5 pushed by ChaoPang
September 11, 2024 17:01 2m 10s v1.1.8
v1.1.8
September 11, 2024 17:01 2m 10s
Update test prediction columns (#56) Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #28: Commit 9ecaca5 pushed by ChaoPang
September 11, 2024 17:00 24s main
main
September 11, 2024 17:00 24s
Update test prediction columns (#56) Tests #39: Commit 9ecaca5 pushed by ChaoPang
September 11, 2024 17:00 5m 13s main
main
September 11, 2024 17:00 5m 13s
Update test prediction columns Tests #38: Pull request #56 opened by ChaoPang
September 11, 2024 16:53 5m 26s update_test_prediction_columns
update_test_prediction_columns
September 11, 2024 16:53 5m 26s
changed the order of dataset mapping functions because index_date nee… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #27: Commit 8052195 pushed by ChaoPang
September 11, 2024 16:15 25s update_test_prediction_columns
update_test_prediction_columns
September 11, 2024 16:15 25s
Cast index_date to the Unix Epoch time in HFFineTuningMapping Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #26: Commit 51cde66 pushed by ChaoPang
September 11, 2024 15:43 22s update_test_prediction_columns
update_test_prediction_columns
September 11, 2024 15:43 22s
converted the index_date column (datetime type) into the Unix epoch t… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #25: Commit a19a370 pushed by ChaoPang
September 11, 2024 15:28 25s update_test_prediction_columns
update_test_prediction_columns
September 11, 2024 15:28 25s
convert the index_date tensors to numpy and squeeze the extra to save… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #24: Commit d2c098e pushed by ChaoPang
September 11, 2024 14:51 25s update_test_prediction_columns
update_test_prediction_columns
September 11, 2024 14:51 25s
fixed a bug in the streaming mode, where DataDict does not have the m… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #23: Commit 2b07f7b pushed by ChaoPang
September 11, 2024 14:46 31s update_test_prediction_columns
update_test_prediction_columns
September 11, 2024 14:46 31s
fixed a bug where the based model instead of the fine-tuned model was… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #22: Commit ee9d94f pushed by ChaoPang
September 11, 2024 12:06 24s update_test_prediction_columns
update_test_prediction_columns
September 11, 2024 12:06 24s
updated the columns of the test prediction output to stick with the M… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #21: Commit 7d1aaa1 pushed by ChaoPang
September 11, 2024 12:02 29s update_test_prediction_columns
update_test_prediction_columns
September 11, 2024 12:02 29s
removed unused imports from peft Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #20: Commit 60ea412 pushed by ChaoPang
September 10, 2024 10:46 30s reorganize_data_preparation
reorganize_data_preparation
September 10, 2024 10:46 30s
fixed a bug where the based model instead of the fine-tuned model was… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #19: Commit 7c23690 pushed by ChaoPang
September 10, 2024 09:52 26s reorganize_data_preparation
reorganize_data_preparation
September 10, 2024 09:52 26s
Implement a custom do_predict because the HF trainer predict has memo… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #18: Commit 1701ebf pushed by ChaoPang
September 10, 2024 04:08 2m 1s v1.1.7
v1.1.7
September 10, 2024 04:08 2m 1s
Implement a custom do_predict because the HF trainer predict has memo… Publish Python 🐍 distribution 📦 to PyPI and TestPyPI #17: Commit 1701ebf pushed by ChaoPang
September 10, 2024 04:07 32s main
main
September 10, 2024 04:07 32s