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Chen et. al. Differential pre-malignant programs and microenvironment chart distinct paths to malignancy in human colorectal polyps. Cell 2021 #1915

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rmadupuri opened this issue Sep 19, 2023 · 0 comments · Fixed by #1935 · May be fixed by #2019
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Chen et. al. Differential pre-malignant programs and microenvironment chart distinct paths to malignancy in human colorectal polyps. Cell 2021 #1915

rmadupuri opened this issue Sep 19, 2023 · 0 comments · Fixed by #1935 · May be fixed by #2019
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rmadupuri commented Sep 19, 2023 •
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PubMed: https://pubmed.ncbi.nlm.nih.gov/34910928/

Data should be available for: according to Fig1A

  • Clinical: Dis(62), Val(59)
  • scRNA-seq: 48T, 66N
  • WES: 33T
  • MxIF or MxIHC: 43T

Clinical Data: Table S1
- Discovery Meta: 62 samples
- Validation Meta: 59 samples

WES Data: https://github.com/Ken-Lau-Lab/STAR_Methods/tree/main/Tables
- Supplemental_Table_Variants_ADs.xlsx - 23 samples
- Supplemental_Table_Variants_SERs.xlsx - 11 samples

scRNA-seq and imaging data
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