The PerplexExamples.ipynb in the example folder cannot be run

[gufan01]

After updating to StatGeochem v0.8.0, I encountered a problem when trying to run the following code in the PerplexExamples.ipynb notebook:

perplex_configure_isobar(perplexdir, scratchdir, composition, elements,
P, T_range, dataset="hp11ver.dat", npoints=100, excludes=G_excludes,
solution_phases=melt_model*"\n"*G_solution_phases)

Despite having Perplex_x_jll installed, the notebook fails to execute this function. It seems the update to StatGeochem might have caused an incompatibility or issue with this specific function call.

Here are the specifics:
OS: Linux
StatGeochem version: 0.8.0
Perplex_x_jll: Installed
Perplex version: v7.1.8
Issue: The PerplexExamples.ipynb notebook no longer runs after updating StatGeochem.
Could you please look into this issue? Let me know if you need any further details.

[brenhinkeller]

Ah sorry about that! We seem to be having some issues with the new Perple_X_jll - based system.

If you can run the notebooks locally, downgrading to StatGeochem v0.7.10 with e.g. ] add [email protected] should provide a workaround until we can figure out the fix

cc @jannittayao