From 94a2bd92d9224c69bacff37d1618265fec15bf28 Mon Sep 17 00:00:00 2001
From: Michal Ziemski <michal@terrestryal.com>
Date: Wed, 23 Oct 2024 14:56:58 -0700
Subject: [PATCH] Try again with coveragerc

---
 .coveragerc         | 12 ++++++++++++
 .coveragercXX       | 16 ----------------
 ci/recipe/meta.yaml |  2 +-
 3 files changed, 13 insertions(+), 17 deletions(-)
 create mode 100644 .coveragerc
 delete mode 100644 .coveragercXX

diff --git a/.coveragerc b/.coveragerc
new file mode 100644
index 00000000..1851da30
--- /dev/null
+++ b/.coveragerc
@@ -0,0 +1,12 @@
+[run]
+source=q2_moshpit
+branch = True
+omit =
+    **/test_*.py
+    **/__init__.py
+    **/_version.py
+    versioneer.py
+    **/_examples.py
+
+[report]
+fail_under = 90
diff --git a/.coveragercXX b/.coveragercXX
deleted file mode 100644
index 8acd9fa0..00000000
--- a/.coveragercXX
+++ /dev/null
@@ -1,16 +0,0 @@
-[run]
-source=q2_moshpit
-branch = True
-omit =
-    **/tests*
-    **/__init__.py
-    q2_moshpit/_version.py
-    versioneer.py
-
-[report]
-fail_under = 90
-omit =
-    **/tests*
-    **/__init__.py
-    q2_moshpit/_version.py
-    versioneer.py
diff --git a/ci/recipe/meta.yaml b/ci/recipe/meta.yaml
index 8737fe80..d1c2e660 100644
--- a/ci/recipe/meta.yaml
+++ b/ci/recipe/meta.yaml
@@ -48,7 +48,7 @@ test:
     - q2_moshpit
     - qiime2.plugins.moshpit
   commands:
-    - coverage run --omit "**/test_*.py,**/__init__.py,**/_version.py,versioneer.py,**/_examples.py" -m pytest && coverage xml -o coverage.xml
+    - coverage run -m pytest && coverage xml -o coverage.xml
 
 about:
   home: https://github.com/bokulich-lab/q2-moshpit