KEGG host connection problems

[Garoutte]

Hello I'm trying to run the tutorial for Orange-Bioinformatics. Specifically the GSEA tutorial. I can't get it to run properly. When I us this command:

genesets = geneset.collections((("KEGG",), "Homo sapiens"))

I get many error messages that boil down to:

"requests.exceptions.ConnectionError: HTTPConnectionPool(host='asterix.fri.uni-lj.si', port=80): Max retries exceeded with url: /orngServerFiles/public/info (Caused by NewConnectionError('<requests.packages.urllib3.connection.HTTPConnection object at 0x10bf679b0>: Failed to establish a new connection: [Errno 8] nodename nor servname provided, or not known',))"

It seems that host='asterix.fri.uni-lj.si' doesn't exist. I was wondering if you could provide me with an updated link or point me in the right direct?

Thank you for your time

Aaron

Orange version

Orange-Bioinformatics version

Expected behavior

Actual behavior

Steps to reproduce the behavior

Additional info (worksheets, data, screenshots, ...)

[markotoplak]

Thanks for the report. Which version of Orange and Orange-bioinformatics are you using?

A while ago we moved data to a new server, but we might have mistakenly left out some parts.

[markotoplak]

It seems you are running some old version. The code was changed to use a new server a year ago: on Oct 21 2016. Please install a recent version of Orange3 and a recent version ob Orange Bioinformatics.

But even if you use the updated version, I am afraid that the documentation is sometimes not up to date. Which tutorial are you following?

[Garoutte]

I'm following this tutorial: http://orange-bioinformatics.readthedocs.io/en/latest/reference/gsea.html

…

On Thu, Oct 26, 2017 at 5:49 AM, Marko Toplak ***@***.***> wrote: It seems you are running some old version. The code was changed to use a new server a year ago: on Oct 21 2016. Please install a recent version of Orange3 and a recent version ob Orange Bioinformatics. But even if you use the updated version, I am afraid that the documentation is sometimes not up to date. Which tutorial are you following? — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#118 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABEaVS6lnA_yUB4CQbTB8_4d8GVF_I_tks5swFXAgaJpZM4QGDM-> .