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[Feature request] Make parsed SDRF data usable #104

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fabianegli opened this issue Apr 4, 2022 · 0 comments
Open

[Feature request] Make parsed SDRF data usable #104

fabianegli opened this issue Apr 4, 2022 · 0 comments

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@fabianegli
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Once SDRF information is parsed and validated it should be possible to use it in a convenient way.

Possible use cases are:

  • exposing it via an API for consumption in scripts or
  • writing it to a file.

Benefits

Python based proteomics data analysis tools don't need to reinvent the wheel, i.e. the SDRF parsing/validation.

A somewhat permissive parser could be used to enforce a strict adherence of the written SDRF file to the SDRF standard. This would have obvious benefits for anyone creating SDRF files as it would allow them to create byte-perfect SDRF files.

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