From 137525e125c973af7f9dbdf743573477a3679e76 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Crist=C3=B3bal=20Gallardo?=
 <gallardo@informatik.uni-freiburg.de>
Date: Thu, 31 Aug 2023 17:06:31 +0200
Subject: [PATCH] Add file

---
 tools/rna_tools/sortmerna/sortmerna.xml | 4 +---
 1 file changed, 1 insertion(+), 3 deletions(-)

diff --git a/tools/rna_tools/sortmerna/sortmerna.xml b/tools/rna_tools/sortmerna/sortmerna.xml
index 665482ba6e..71bceb75a1 100644
--- a/tools/rna_tools/sortmerna/sortmerna.xml
+++ b/tools/rna_tools/sortmerna/sortmerna.xml
@@ -587,9 +587,7 @@ sortmerna --version 2>&1|grep 'SortMeRNA version'
             <conditional name="aligned_fastx">
                 <param name="aligned_fastx_selector" value="" />
             </conditional>
-            <output_collection name="output_bam" type="list" count="1">
-                <element name="_reads"  value="test10_bam.bam" compare="sim_size" delta="200" />
-            </output_collection>
+            <output name="output_bam" file="test10_bam.bam" compare="sim_size" delta="200" />
         </test>
     </tests>
     <help>