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HGNC links on human gene pages going to RGD instead of HGNC #207

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srengel opened this issue Feb 27, 2017 · 3 comments
Open

HGNC links on human gene pages going to RGD instead of HGNC #207

srengel opened this issue Feb 27, 2017 · 3 comments

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@srengel
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srengel commented Feb 27, 2017

example, on this page http://staging.alliancegenome.org/gene/HGNC:7154

the 'Primary source' link labeled HGNC:7154 is going here:
http://rgd.mcw.edu/rgdweb/report/gene/main.html?id=HGNC:7154

but should be going here:
http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=7154

@LucyHut
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LucyHut commented Feb 28, 2017

@paaatrick , I'll take care of this - spent few hours debugging this and it turns out data provider associated with these HGNC primaryIDs is RGD and not HGNC - and since we resolve the primary source link using the gene's dataProvider - that explains why RGD's link is returned.

I have a working copy ... but will discuss the logic with the team before committing any change.

@paaatrick
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To do this right, this should be handled at the data level (as opposed to some special-casing in the frontend). Given that, this seems like at least a 0.3.1 thing.

@LucyHut
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LucyHut commented Feb 28, 2017

Agreed

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