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uniting methylRawDB objects with regional resolution and setting destrand=TRUE deletes the original objects #270
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library(methylKit)
data(methylKit)
mdb <- makeMethylDB(methylRawList.obj)
# works for "base" -resolution
unite(mdb,destrand=TRUE)
mdb # is fine
# breaks for "region" -resolution
mdbt <- tileMethylCounts(mdb)
# works
unite(mdbt)
# deletes tabix files of mdbt
unite(mdbt,destrand=TRUE)
mdbt # breaks !! |
alexg9010
changed the title
uniting objects with regional resolution deletes the original objects
uniting objects with regional resolution *and setting destrand=TRUE* deletes the original objects
Oct 23, 2022
alexg9010
changed the title
uniting objects with regional resolution *and setting destrand=TRUE* deletes the original objects
uniting objects with regional resolution and setting destrand=TRUE deletes the original objects
Oct 23, 2022
alexg9010
changed the title
uniting objects with regional resolution and setting destrand=TRUE deletes the original objects
uniting methylRawDB objects with regional resolution and setting destrand=TRUE deletes the original objects
Oct 23, 2022
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methylKit/R/methylDBFunctions.R
Line 747 in 4735b6f
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