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Output distance matrix in terms of number of SNPs #2

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dfornika opened this issue May 29, 2020 · 0 comments · May be fixed by #6

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dfornika commented May 29, 2020

The distance matrix that is currently included in the output of this pipeline is the maximum likelihood distance matrix from IQTree.

It may also be useful to provide a distance matrix that is expressed in terms of the number of SNP differences between each pair of samples.

dfornika linked a pull request

that will close this issue

Add pipeline v0.2.0 with snp-dists SNP distance matrix #6

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