DESCRIPTION

Package: teamlahti
Title: AMR resistome data analysis with R/Bioconductor
Version: 0.0.1
Authors@R:  c(person("Leo", "Lahti", 
                 role = c("aut"),
                 email ="leo.lahti@iki.fi",
                 comment = c(ORCID = "0000-0001-5537-637X")),
             person("Muluh", "Geraldson",
                 email = "rysdaena8@gmail.com",
                 role = c("aut", "cre"), 
                 comment = c(ORCID = '0000-0002-9721-5192')),
             person("Akewak", "Jeba",
                 email = "akjeba@utu.fi",
                 role = c("aut"), 
                 comment = c(ORCID = '0009-0007-1347-7552')),
             person("Nitin", "Bayal",
                 email = "nitin.bayal@utu.fi",
                 role = c("aut"), 
                 comment = c(ORCID = '0000-0002-4840-9898')),
             person("Shivang", "Bhanushali",
                 email = "shivang.bhanushali@utu.fi",
                 role = c("aut"), 
                 comment = c(ORCID = '0009-0007-8277-3662')),
             person("Dattaray", "Mongad",
                 email = "datta.mongad@gmail.com",
                 role = c("aut"), 
                 comment = c(ORCID = '0000-0003-4801-7410')),
             person("Mahkameh", "Salehi",
                 email = "mahksa@utu.fi",
                 role = c("aut"), 
                 comment = c(ORCID = '0009-0009-7153-226X'))
             )
Description: Contains a reproducible tutorial on how to analyse and visualize 
             variation in a large resistome profiling data set and associate it 
             with various background factors by using the latest R/Bioconductor 
             methods.
License: Artistic-2.0
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
    R (>= 4.0),
    SummarizedExperiment,
    SingleCellExperiment,
    TreeSummarizedExperiment (>= 1.99.3),
URL: https://github.com/NCBI-Codeathons/amr-2024-team-lahti
BugReports: https://github.com/NCBI-Codeathons/amr-2024-team-lahti/issues
Suggests: 
    knitr,
    rmarkdown
VignetteBuilder: knitr