Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[FEATURE] Training Cellpose models in napari #53

Open
YitengDang opened this issue Jul 15, 2024 · 1 comment
Open

[FEATURE] Training Cellpose models in napari #53

YitengDang opened this issue Jul 15, 2024 · 1 comment
Labels
enhancement New feature or request

Comments

@YitengDang
Copy link

I'd like to train a Cellpose model on own data and was wondering whether it would be possible to do this in napari rather than using the Cellpose GUI. I would benefit from the visualisation options in napari (especially for adjusting brightness/contrast and dealing with image stacks with time) as well as the ability to label individual pixels rather than draw circles around cells. The cellpose-napari plugin doesn't seem to offer training options, and I was wondering if there is either a workaround or future plans to incorporate training into the plugin?

@carsen-stringer
Copy link
Member

this is on the to-do list!

@carsen-stringer carsen-stringer changed the title Training Cellpose models in napari [FEATURE] Training Cellpose models in napari Sep 13, 2024
@carsen-stringer carsen-stringer added the enhancement New feature or request label Sep 13, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

2 participants