diff --git a/.gitignore b/.gitignore index 7b38327..2f8e926 100644 --- a/.gitignore +++ b/.gitignore @@ -108,8 +108,6 @@ ENV/ # In-tree generated files */_version.py scripts/test_stability_protocol/ -*pdb -*dcd *pt test_stability_protocol/ guardowl/data/drugbank/ \ No newline at end of file diff --git a/README.md b/README.md index 0942138..be43114 100644 --- a/README.md +++ b/README.md @@ -20,10 +20,21 @@ StableNetGuardOwl provides a robust suite for conducting stability tests on Neural Network Potentials (NNPs) used in molecular simulations. These tests are critical in validating NNPs for research and industrial applications, ensuring accuracy and reliability. + +## Installation + +Since openMM and PhysML use different package managers, obtaining a conda|mamba environment with the correct packages is not trivial. +The following (note the order of the installation of the packages, this is critical for a working environment) has worked in the past: +```bash +mamba create --name owl python=3.11 +mamba activate owl +pip install "physicsml[openmm, openeye, rdkit]" +mamba install openmm-ml pytorch-gpu -c conda-forge +mamba install openmmtools loguru typer openff-toolkit +``` ## Features StableNetGuardOwl supports stability tests for NNPs integrated with `openMM` and those implemented within `openmm-ml` or the Exscientia `physics-ml` package. -Currently this supports a range of NNPs including but not limited to `SchNET`, `PaiNN`, `MACE`, and `nequip`. ## Test Matrix @@ -67,16 +78,15 @@ There is an example `test_config.yaml` file provided in the `scripts` directory For a stability test using a pure 15 Angstrom waterbox the `config.yaml` file may look like this ``` tests: - - protocol: "waterbox_protocol" # which protocol is performed + - protocol: "waterbox_test" # which protocol is performed edge_length: 15 # waterbox edge length in Angstrom ensemble: "NVT" # thermodynamic esamble that is used. Oter options are 'NpT' and 'NVE'. nnp: "ani2x" # the NNP used - implementation: "nnpops" # the implementation if multiple are available annealing: false # simulated annealing to slowly reheat the system at the beginning of a simulation nr_of_simulation_steps: 10_000 # number of simulation steps temperature: 300 # in Kelvin ``` -It defines the potential (nnp and implementation), the number of simulation steps, temperature in Kelvin, and edge length of the waterbox in Angstrom as well as the thermodynamic ensemble (`NVT`). Passing this to the `perform_guardowls.py` script runs the tests +It defines the potential, the number of simulation steps, temperature in Kelvin, and edge length of the waterbox in Angstrom as well as the thermodynamic ensemble (`NVT`). Passing this to the `perform_guardowls.py` script runs the tests To visualize the results, use the `visualize_results.ipynb` notebook. @@ -105,7 +115,6 @@ To perform a DOF scan over a bond in ethanol you need to generate a yaml file co tests: - protocol: "perform_DOF_scan" nnp: "ani2x" - implementation: "torchani" DOF_definition: { "bond": [0, 2] } molecule_name: "ethanol" ``` diff --git a/devtools/conda-envs/test_env.yaml b/devtools/conda-envs/test_env.yaml index 4bb57c4..030e8b4 100644 --- a/devtools/conda-envs/test_env.yaml +++ b/devtools/conda-envs/test_env.yaml @@ -8,6 +8,7 @@ dependencies: - python - pip - openmm>=8.0 + - openmm-ml - openmm-torch - openff-toolkit - openmmtools @@ -27,6 +28,7 @@ dependencies: - pytest-cov - codecov - black + - rdkit # Testing - pytest @@ -35,6 +37,4 @@ dependencies: # Pip-only installs - pip: - - nvidia-ml-py3 - - nptyping - - git+https://github.com/openmm/openmm-ml.git + - physicsml diff --git a/guardowl/analysis.py b/guardowl/analysis.py index 425fb6c..2243d0a 100644 --- a/guardowl/analysis.py +++ b/guardowl/analysis.py @@ -2,6 +2,7 @@ import numpy as np from typing import List, Tuple from loguru import logger as log +from pathlib import Path class PropertyCalculator: @@ -86,6 +87,31 @@ def calculate_water_rdf(self) -> np.ndarray: ) return rdf_result + def experimental_water_rdf(self) -> np.ndarray: + """ + Returns the data for the experimental radial distribution function (RDF) for + water molecules. This is taken from the file experimental_water_rdf.txt + + Returns + ------- + np.ndarray + The RDF values for water molecules. + """ + # get cwd + base_path = Path(__file__).parent + exp_rdf_path = (base_path / "data/experimental_water_rdf.txt").resolve() + + # load experimental water rdf data + rdf_data = np.loadtxt(exp_rdf_path) + + # convert A to nm for use with mdtraj + rdf_x = [pt / 10 for pt in rdf_data[:, [0]]] + + rdf_y = rdf_data[:, [1]] + + # return O-O data + return rdf_x, rdf_y + def _extract_water_bonds(self) -> List[Tuple[int, int]]: bond_list = [] for bond in self.md_traj.topology.bonds: @@ -217,5 +243,5 @@ def monitor_phi_psi(self) -> Tuple[np.ndarray, np.ndarray]: """ _, phi_angles = md.compute_phi(self.md_traj) - _, psi_angle = md.compute_psi(self.md_traj) + _, psi_angles = md.compute_psi(self.md_traj) return (phi_angles, psi_angles) diff --git a/guardowl/benchmark.py b/guardowl/benchmark.py index 7bfab55..ae3a2d1 100644 --- a/guardowl/benchmark.py +++ b/guardowl/benchmark.py @@ -65,7 +65,6 @@ def __init__( # type: ignore platform: str, qml_timing, reference_timing, - implementation: str = "", ) -> None: Process.__init__(self) self.simulation_factory = SimulationFactory() @@ -74,7 +73,6 @@ def __init__( # type: ignore self.nnp = nnp self.remove_constraints = remove_constraints self.platform = platform - self.implementation = implementation self.qml_timing = qml_timing self.reference_timing = reference_timing @@ -97,14 +95,13 @@ def get_timing_for_spe_calculation( def run(self) -> None: # this is executed as soon as the process is started - print(f"{self.implementation=} {self.platform=}") + print(f"{self.platform=}") potential = MLPotential(self.nnp) system = self.system_factory.initialize_system( potential, self.testsystem.topology, self.remove_constraints, - implementation=self.implementation, ) psim = self.simulation_factory.create_simulation( @@ -164,7 +161,6 @@ def run_benchmark( testsystems: Generator[TestSystem, None, None], remove_constraints: bool, platform: str, - implementation: str = "", ) -> None: self.reference_timing, self.qml_timing, self.gpu_memory = [], [], [] # start memory logger @@ -186,7 +182,6 @@ def run_benchmark( platform, qml_timing, reference_timing, - implementation, ) simulation_test.start() log.info("Started simulation") diff --git a/guardowl/data/experimental_water_rdf.txt b/guardowl/data/experimental_water_rdf.txt new file mode 100644 index 0000000..710f1c4 --- /dev/null +++ b/guardowl/data/experimental_water_rdf.txt @@ -0,0 +1,402 @@ +0.00 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.01 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.03 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.06 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.09 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.12 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.15 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.18 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.21 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +0.24 0.0000 0.0000 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100644 --- a/guardowl/parameters.py +++ b/guardowl/parameters.py @@ -121,5 +121,6 @@ class DOFTestParameters(BaseParameters): """ bond: List = field(default_factory=lambda: []) + bond_length_max: int = field(default_factory=int) angle: List = field(default_factory=lambda: []) torsion: List = field(default_factory=lambda: []) diff --git a/guardowl/protocols.py b/guardowl/protocols.py index af83a9b..a82d1a6 100644 --- a/guardowl/protocols.py +++ b/guardowl/protocols.py @@ -5,7 +5,7 @@ import numpy as np from loguru import logger as log -from openmm import State, System, unit, Platform +from openmm import State, unit, Platform from openmm.app import Simulation, StateDataReporter, Topology from .parameters import ( @@ -18,9 +18,7 @@ class StabilityTest: - """ - Abstract base class for stability tests on molecular systems using OpenMM. - """ + """ """ implemented_ensembles = ["npt", "nvt", "nve"] @@ -106,6 +104,7 @@ def _setup_simulation( """ from .simulation import SimulationFactory + from openmm import MonteCarloBarostat sim = SimulationFactory.create_simulation( parameters.system, @@ -126,6 +125,36 @@ def _setup_simulation( sim.minimizeEnergy(tolerance=minimization_tolerance, maxIterations=1_000) log.info("Energy minimization complete.") + """ + log.info("Equilibrating system") + + sim.context.setVelocitiesToTemperature(5*unit.kelvin) + + log.info('Warming up the system...') + + T = 5 + mdsteps = 50000 + for i in range(60): + sim.step(int(mdsteps/60)) + temperature = (T+(i*T))*unit.kelvin + sim.integrator.setTemperature(temperature) + + + #NPT equilibration, reducing backbone constraints + mdsteps = 500000 + #barostat = parameters.system.addForce(MonteCarloBarostat(unit.Quantity(1, unit.atmosphere), temperature)) + + parameters.system.addForce(MonteCarloBarostat(unit.Quantity(1, unit.atmosphere), temperature)) + + sim.context.reinitialize(True) + + log.info('Running NPT equilibration...') + + for i in range(100): + sim.step(int(mdsteps/100)) + #sim.context.setParameter('k', (float(99.02-(i*0.98))*unit.kilojoule_per_mole/unit.angstrom**2)) + """ + # Execute simulated annealing if enabled if getattr(parameters, "simulated_annealing", False): log.info("Running Simulated Annealing MD...") @@ -173,15 +202,19 @@ def setup_simulation(self, parameters: DOFTestParameters) -> Simulation: env="vacuum", ) + # Set initial positions + sim.context.setPositions(parameters.testsystem.positions) + # write pdb file - pdb_path = f"{parameters.output_folder}/{parameters.log_file_name}.pdb" - with open(pdb_path, "w") as pdb_file: + output_file_name = f"{parameters.output_folder}/{parameters.log_file_name}" + + state = sim.context.getState(getPositions=True, getEnergy=True) + PDBFile.writeFile( + parameters.testsystem.topology, + state.getPositions(), + open(f"{output_file_name}.pdb", "w"), + ) - PDBFile.writeFile( - parameters.testsystem.topology, - parameters.testsystem.positions, - pdb_path, - ) return sim def perform_scan(self, parameters: DOFTestParameters) -> None: @@ -280,7 +313,9 @@ def perform_DOF_scan( initial_pos = parameters.testsystem.positions conformations, potential_energy, bond_length = [], [], [] - for length in np.linspace(0, 10, 50): # in angstrom + max_bond_stretch = parameters.bond_length_max + + for length in np.linspace(0, max_bond_stretch, 100): # in angstrom new_pos = self.set_bond_length( initial_pos, bond_atom1, @@ -318,7 +353,7 @@ def perform_stability_test( parms.log_file_name = f"{parms.log_file_name}_{parms.temperature}" - sim = self._setup_simulation(parms, minimize=False) + sim = self._setup_simulation(parms, minimize=True) self._run_simulation(parms, sim) @@ -398,10 +433,17 @@ def perform_stability_test(self, parms: StabilityTestParameters) -> None: self._run_simulation(_parms, qsim) -def run_hipen_protocol( - hipen_idx: Union[int, List[int]], - nnp: str, - implementation: str, +from openmmml import MLPotential +from physicsml.plugins.openmm.physicsml_potential import ( + MLPotential as PhysicsMLPotential, +) + + +def run_small_molecule_test( + smiles: Union[str, List[str]], + names: Union[str, List[str]], + nnp: Union[MLPotential, PhysicsMLPotential], # intialized NNP + nnp_name: str, temperature: Union[int, List[int]], reporter: StateDataReporter, platform: Platform, @@ -410,47 +452,39 @@ def run_hipen_protocol( nr_of_simulation_steps: int = 5_000_000, ): """ - Executes stability tests for specified hipen molecules in vacuum using a neural network potential (NNP) - with a specific implementation at multiple temperatures. + Performs a vacuum stability test for one or more small molecules using a given neural network potential (NNP). Parameters ---------- - hipen_idx : Union[int, List[int]] - The index or indices of the hipen molecule(s) to simulate. - nnp : str - The neural network potential to use for the simulation. - implementation : str - The specific implementation of the NNP. + smiles : Union[str, List[str]] + The SMILES string(s) of the small molecule(s) to test. + names : Union[str, List[str]] + The name(s) of the small molecule(s) to test. + nnp + The initialized neural network potential to use for the stability test. temperature : Union[int, List[int]] - The temperature or list of temperatures at which to perform the simulations. - Multiple temperatures trigger a multi-temperature protocol. + The simulation temperature or list of temperatures for multi-temperature protocols. reporter : StateDataReporter The OpenMM StateDataReporter for logging simulation progress. platform : Platform - The OpenMM Platform on which to run the simulations. + The OpenMM Platform on which to run the simulation. output_folder : str - The directory path where output files will be saved. + Directory where output files will be saved. device_index : int, optional - The index of the GPU device to use for the simulations, defaults to 0. + The index of the GPU device to use, defaults to 0. nr_of_simulation_steps : int, optional - The total number of simulation steps to perform, defaults to 5,000,000. - + Total number of simulation steps, defaults to 5,000,000. """ - from guardowl.testsystems import TestsystemFactory, SmallMoleculeVacuumOption - def _run_protocol(hipen_idx: int): - name = list(TestsystemFactory._HIPEN_SYSTEMS.keys())[hipen_idx] + from guardowl.testsystems import TestsystemFactory, SmallMoleculeVacuumOption - log.info( - f"Performing vacuum stability test for {name} using {nnp} with {implementation}." - ) - opt = SmallMoleculeVacuumOption(name) + def _run_protocol(opt: SmallMoleculeVacuumOption): + log.info(f"Performing vacuum stability test for {opt.name}.") testsystem = TestsystemFactory().generate_testsystem(opt) - system = SystemFactory.initialize_system( - nnp, testsystem.topology, implementation - ) - log_file_name = f"vacuum_{name}_{nnp}_{implementation}" + system = SystemFactory.initialize_system(nnp, testsystem.topology) + log_file_name = f"vacuum_{opt.name}" + log.info(f"Logging to {output_folder}/{log_file_name}") # Select protocol based on whether temperature is a list or a single value stability_test = ( @@ -477,19 +511,23 @@ def _run_protocol(hipen_idx: int): stability_test.perform_stability_test(params) log.info(f"\nSaving {params.log_file_name} files to {params.output_folder}") - # Run protocol for each specified hipen index - if isinstance(hipen_idx, int): - _run_protocol(hipen_idx) - else: - for idx in hipen_idx: - _run_protocol(idx) + # Run protocol for each specified hipen index + from guardowl.testsystems import SmallMoleculeVacuumOption + + if isinstance(smiles, str): + opt = SmallMoleculeVacuumOption(smiles=smiles, name=names) + _run_protocol(opt) + else: + for smile, name in zip(smiles, names): + opt = SmallMoleculeVacuumOption(smiles=smile, name=name) + _run_protocol(opt) -def run_waterbox_protocol( +def run_waterbox_test( edge_length: int, ensemble: str, nnp: str, - implementation: str, + nnp_name: str, temperature: Union[int, List[int]], reporter: StateDataReporter, platform: Platform, @@ -501,7 +539,7 @@ def run_waterbox_protocol( ): """ Performs a stability test on a waterbox system with specified edge length using a - neural network potential (NNP) and implementation in a given ensemble at multiple temperatures. + neural network potential (NNP) in a given ensemble at multiple temperatures. Parameters ---------- @@ -511,8 +549,6 @@ def run_waterbox_protocol( The ensemble to simulate (e.g., 'NVT', 'NPT'). nnp : str The neural network potential to use. - implementation : str - The specific implementation of the NNP. temperature : Union[int, List[int]] The simulation temperature or list of temperatures for multi-temperature protocols. reporter : StateDataReporter @@ -532,7 +568,7 @@ def run_waterbox_protocol( """ log.info( - f"Initiating waterbox stability test: {edge_length}A edge, {nnp} potential, {implementation} implementation, {ensemble} ensemble." + f"Initiating waterbox stability test: {edge_length}A edge, {nnp_name} potential, {ensemble} ensemble." ) from openmm import unit from guardowl.testsystems import TestsystemFactory, LiquidOption @@ -540,9 +576,9 @@ def run_waterbox_protocol( opt = LiquidOption(name="water", edge_length=edge_length * unit.angstrom) testsystem = TestsystemFactory().generate_testsystem(opt) - system = SystemFactory.initialize_system(nnp, testsystem.topology, implementation) + system = SystemFactory.initialize_system(nnp, testsystem.topology) - log_file_name = f"waterbox_{edge_length}A_{nnp}_{implementation}_{ensemble}" + log_file_name = f"waterbox_{edge_length}A_{nnp_name}_{ensemble}" if isinstance(temperature, list): log_file_name += f"_multi-temp" else: @@ -571,12 +607,12 @@ def run_waterbox_protocol( log.info(f"Simulation files saved to {output_folder}") -def run_pure_liquid_protocol( +def run_organic_liquid_test( molecule_name: Union[str, List[str]], nr_of_molecule: Union[int, List[int]], ensemble: str, nnp: str, - implementation: str, + nnp_name: str, temperature: Union[int, List[int]], reporter: StateDataReporter, platform: Platform, @@ -587,7 +623,7 @@ def run_pure_liquid_protocol( nr_of_equilibration_steps: int = 50_000, ): """ - Executes stability tests for specified pure liquid systems, each containing a defined number of molecules, using a neural network potential (NNP) with a specified implementation at various temperatures. + Executes stability tests for specified pure liquid systems, each containing a defined number of molecules, using a neural network potential (NNP) at various temperatures. Parameters ---------- @@ -599,8 +635,6 @@ def run_pure_liquid_protocol( The ensemble to simulate (e.g., 'NVT', 'NPT'). nnp : str The neural network potential to use. - implementation : str - The specific implementation of the NNP. temperature : Union[int, List[int]] The simulation temperature(s) for the stability test. reporter : StateDataReporter @@ -636,14 +670,12 @@ def run_pure_liquid_protocol( opt = LiquidOption(name, nr_of_molecules) testsystem = TestsystemFactory().generate_testsystem(opt) - system = SystemFactory.initialize_system( - nnp, testsystem.topology, implementation - ) + system = SystemFactory.initialize_system(nnp, testsystem.topology) temperature_str = ( f"{temperature}K" if isinstance(temperature, int) else "multi-temp" ) - log_file_name = f"pure_liquid_{name}_{nr_of_molecules}_{nnp}_{implementation}_{ensemble}_{temperature_str}" + log_file_name = f"pure_liquid_{name}_{nr_of_molecules}_{nnp_name}_{ensemble}_{temperature_str}" log.info(f"Simulation output will be written to {log_file_name}") @@ -671,9 +703,9 @@ def run_pure_liquid_protocol( from typing import Literal -def run_alanine_dipeptide_protocol( +def run_alanine_dipeptide_test( nnp: str, - implementation: str, + nnp_name: str, temperature: int, reporter: StateDataReporter, platform: Platform, @@ -685,14 +717,12 @@ def run_alanine_dipeptide_protocol( env: Literal["vacuum", "solution"] = "vacuum", ): """ - Executes a stability test for an alanine dipeptide system within specified environmental conditions using a neural network potential (NNP) and its implementation. + Executes a stability test for an alanine dipeptide system within specified environmental conditions using a neural network potential (NNP). Parameters ---------- nnp : str The neural network potential to use for the simulation. - implementation : str - The specific implementation of the NNP. temperature : int The temperature at which to perform the simulation, in Kelvin. reporter : StateDataReporter @@ -714,7 +744,7 @@ def run_alanine_dipeptide_protocol( """ log.info( - f"Initiating alanine dipeptide stability test in {env} using {nnp} potential with {implementation} implementation." + f"Initiating alanine dipeptide stability test in {env} using {nnp_name} potential." ) from guardowl.testsystems import ( SmallMoleculeVacuumOption, @@ -730,9 +760,9 @@ def run_alanine_dipeptide_protocol( raise RuntimeError(f"Invalid environment option: {env}") testsystem = TestsystemFactory().generate_testsystem(opt) - system = SystemFactory.initialize_system(nnp, testsystem.topology, implementation) + system = SystemFactory.initialize_system(nnp, testsystem.topology) env_str = "vacuum" if env == "vacuum" else f"{env}_{ensemble}" - log_file_name = f"alanine_dipeptide_{env_str}_{nnp}_{implementation}_{temperature}K" + log_file_name = f"alanine_dipeptide_{env_str}_{nnp_name}_{temperature}K" log.info(f"Simulation output will be written to {log_file_name}") @@ -759,45 +789,45 @@ def run_alanine_dipeptide_protocol( def run_DOF_scan( nnp: str, - implementation: str, + nnp_name: str, DOF_definition: Dict[str, list], + reporter: StateDataReporter, platform: Platform, output_folder: str, name: str = "ethanol", + bond_length_max: Union[int, float] = 10.0, ): """ Executes a scan over a specified degree of freedom (DOF) for a given molecule using a neural - network potential (NNP) and its implementation. - + network potential (NNP). Parameters ---------- nnp : str The neural network potential to use for the simulation. - implementation : str - The specific implementation of the NNP. DOF_definition : Dict[str, list] The degrees of freedom to scan. Supported keys are 'bond', 'angle', and 'torsion'. Each key maps to a list of atom indices defining the DOF. + reporter : StateDataReporter + The OpenMM StateDataReporter for logging simulation progress. platform : Platform The OpenMM Platform on which to run the simulation. output_folder : str The directory where output files will be saved. name : str, optional The name of the molecule for simulation, defaults to 'ethanol'. - + bond_length_max : Union[int, float] = 10.0 + The maximum distance to stretch the bond too. """ - log.info( - f"Initiating DOF scan for {name} using {nnp} with {implementation} implementation." - ) + log.info(f"Initiating DOF scan for {name} using {nnp_name}.") from guardowl.protocols import BondProfileProtocol, DOFTestParameters from guardowl.testsystems import TestsystemFactory, SmallMoleculeVacuumOption opt = SmallMoleculeVacuumOption(name=name) - testsystem = TestsystemFactory().generate_testsystem(name) - system = SystemFactory.initialize_system(nnp, testsystem.topology, implementation) + testsystem = TestsystemFactory().generate_testsystem(opt) + system = SystemFactory.initialize_system(nnp, testsystem.topology) - log_file_name = f"DOF_scan_{name}_{nnp}_{implementation}" + log_file_name = f"DOF_scan_{name}_{nnp_name}" if "bond" in DOF_definition: protocol = BondProfileProtocol() @@ -817,18 +847,22 @@ def run_DOF_scan( testsystem=testsystem, output_folder=output_folder, log_file_name=log_file_name, + bond_length_max=bond_length_max, **DOF_definition, ) + log.info( f"Performing {dof_type} scan with DOF definition: {DOF_definition[dof_type]}" ) + protocol.perform_scan(params) + log.info(f"Scan results saved to {output_folder}") def run_detect_minimum( nnp: str, - implementation: str, + nnp_name: str, platform: Platform, output_folder: str, percentage: int = 10, @@ -841,8 +875,6 @@ def run_detect_minimum( ---------- nnp : str The neural network potential to use for the minimization test. - implementation : str - The implementation details of the neural network potential. platform : Platform The OpenMM Platform to perform simulations on. output_folder : str @@ -907,7 +939,7 @@ def _above_threshold(mol: Chem.Mol) -> bool: counter = 0 log.info( - f"Performing minimization for {nr_of_molecules_to_test} molecules using {nnp} with {implementation}." + f"Performing minimization for {nr_of_molecules_to_test} molecules using {nnp_name}." ) for (_, minimized_position), ( @@ -945,10 +977,8 @@ def _above_threshold(mol: Chem.Mol) -> bool: continue # set the minimized positions reference_testsystem.positions = minimized_position - system = SystemFactory.initialize_system( - nnp, reference_testsystem.topology, implementation - ) - log_file_name = f"ref_{name}_{nnp}_{implementation}" + system = SystemFactory.initialize_system(nnp, reference_testsystem.topology) + log_file_name = f"ref_{name}_{nnp}" params = MinimizationTestParameters( platform=platform, @@ -971,10 +1001,8 @@ def _above_threshold(mol: Chem.Mol) -> bool: minimize_testsystem = reference_testsystem minimize_testsystem.positions = start_position - system = SystemFactory.initialize_system( - nnp, minimize_testsystem.topology, implementation - ) - log_file_name = f"minimize_{name}_{nnp}_{implementation}" + system = SystemFactory.initialize_system(nnp, minimize_testsystem.topology) + log_file_name = f"minimize_{name}_{nnp_name}" params = MinimizationTestParameters( platform=platform, diff --git a/guardowl/setup.py b/guardowl/setup.py index 5d302d9..21f5248 100644 --- a/guardowl/setup.py +++ b/guardowl/setup.py @@ -1,11 +1,10 @@ -from typing import Tuple, Optional -from loguru import logger as log +from io import StringIO +from typing import Optional +from loguru import logger as log from openmm.app import PDBFile - from rdkit import Chem from rdkit.Chem import AllChem -from io import StringIO def generate_molecule_from_smiles(smiles: str) -> Optional[Chem.Mol]: @@ -79,3 +78,62 @@ def generate_molecule_from_sdf(path: str) -> Optional[Chem.Mol]: log.error(f"Failed to load molecule from SDF file: {path}") return None + + +from typing import Dict, Union +from openmmml import MLPotential +from physicsml.plugins.openmm.physicsml_potential import ( + MLPotential as PhysicsMLPotential, +) + + +class PotentialFactory: + + def __init__(self) -> None: + pass + + @staticmethod + def initialize_potential( + params: Dict[str, Union[str, float, int]] + ) -> Union["MLPotential", "PhysicsMLPotential"]: + """ + Initializes a potential based on the provided parameters. + + Parameters + ---------- + params : Dict[str, Union[str, float, int]] + A dictionary containing the parameters for the potential. The required keys are: + - "provider": The provider of the potential, either "openmm-ml" or "physics-ml". + - "model_name": The name of the model. + - "precision": The precision of the model (only for "physics-ml" provider). + - "position_scaling": The scaling factor for the position (only for "physics-ml" provider). + - "output_scaling": The scaling factor for the output (only for "physics-ml" provider). + - "model_path": The path to the model file (only for "physics-ml" provider). + + Returns + ------- + MLPotential + An instance of the appropriate potential class based on the provided parameters. + """ + + log.info( + f"Initialize {params['model_name']} potential from {params['provider']}" + ) + kwargs = {} + if params["provider"] == "openmm-ml": + kwargs["name"] = params["model_name"].lower() + elif params["provider"] == "physics-ml": + + kwargs["name"] = "physicsml_model" # that key word needs to be present + kwargs["precision"] = str(params["precision"]) # NOTE: precision has to be passed as str + kwargs["position_scaling"] = float(params["position_scaling"]) + kwargs["output_scaling"] = float(params["output_scaling"]) + kwargs["model_path"] = params.get("model_path", None) + kwargs["repo_url"] = params.get("repo_url", None) + kwargs["rev"] = params.get("rev", None) + kwargs["device"] = params.get("device", None) + kwargs["model_path_in_repo"] = params.get("model_path_in_repo", None) + else: + raise RuntimeError(f"Unsupported potential type: {params}") + + return MLPotential(**kwargs) diff --git a/guardowl/simulation.py b/guardowl/simulation.py index 2046484..548da66 100644 --- a/guardowl/simulation.py +++ b/guardowl/simulation.py @@ -1,5 +1,5 @@ import logging -from typing import List, Type, Optional +from typing import List, Literal, Optional, Type from loguru import logger as log from openmm import LangevinIntegrator, Platform, System, unit @@ -8,7 +8,6 @@ from openmmtools.integrators import BAOABIntegrator from .constants import collision_rate, stepsize -from typing import Literal class SimulationFactory: @@ -59,11 +58,12 @@ def create_simulation( MonteCarloBarostat(unit.Quantity(1, unit.atmosphere), temperature) ) - simulation = Simulation(topology, system, integrator, platform) - if platform.getName() == "CUDA": - simulation.context.setPlatformProperty("CudaDeviceIndex", str(device_index)) - simulation.context.setPlatformProperty("CudaPrecision", "mixed") + prop = {"CudaDeviceIndex": str(device_index), "CudaPrecision": "mixed"} + simulation = Simulation(topology, system, integrator, platform, prop) + else: + simulation = Simulation(topology, system, integrator, platform) + return simulation @@ -72,7 +72,6 @@ class SystemFactory: def initialize_system( potential: Type[MLPotential], topology: Topology, - implementation: str = "torchani", ) -> System: """ Initialize an OpenMM system using a machine learning potential. @@ -83,8 +82,6 @@ def initialize_system( The machine learning potential class. topology : Topology The OpenMM topology object. - implementation : str, optional - The specific implementation of the ML potential, by default "". Returns ------- @@ -97,7 +94,4 @@ def initialize_system( >>> topology = Topology() >>> system = SystemFactory.initialize_system(potential, topology) """ - return potential.createSystem( - topology, - implementation=implementation, - ) + return potential.createSystem(topology, implementation="torchani") diff --git a/guardowl/tests/data/physics-ml/mace/featurisation_metadata.json b/guardowl/tests/data/physics-ml/mace/featurisation_metadata.json new file mode 100644 index 0000000..b9acffc --- /dev/null +++ b/guardowl/tests/data/physics-ml/mace/featurisation_metadata.json @@ -0,0 +1,164 @@ +{ + "config": [ + { + "column": "mol_bytes", + "representations": [ + { + "as": "{feature_name}", + "config": { + "atomic_energies": { + "1": -0.5978583943827134, + "6": -38.08933878049795, + "7": -54.711968298621066, + "8": -75.19106774742086, + "9": -99.80348506781634, + "16": -398.1577125334925, + "17": -460.1681939421027 + }, + "atomic_number_mapping": { + "1": 0, + "6": 1, + "7": 2, + "8": 3, + "9": 4, + "16": 5, + "17": 6 + }, + "backend": "rdkit" + }, + "name": "physicsml_features", + "presets": {} + } + ] + } + ], + "runtime": { + "Jinja2": "3.1.3", + "Markdown": "3.5.2", + "MarkupSafe": "2.1.5", + "PyYAML": "6.0.1", + "Pygments": "2.17.2", + "Werkzeug": "3.0.1", + "absl-py": "2.1.0", + "aiohttp": "3.9.3", + "aiosignal": "1.3.1", + "asttokens": "2.4.1", + "attrs": "23.2.0", + "boto3": "1.34.50", + "botocore": "1.34.50", + "certifi": "2024.2.2", + "charset-normalizer": "3.3.2", + "cloudpathlib": "0.18.1", + "cmake": "3.28.3", + "colorama": "0.4.6", + "comm": "0.2.1", + "datasets": "2.17.1", + "debugpy": "1.6.7", + "decorator": "5.1.1", + "dill": "0.3.8", + "e3nn": "0.5.1", + "evaluate": "0.4.1", + "exceptiongroup": "1.2.0", + "executing": "2.0.1", + "filelock": "3.13.1", + "frozenlist": "1.4.1", + "fsspec": "2023.10.0", + "grpcio": "1.62.0", + "h5py": "3.10.0", + "huggingface-hub": "0.21.1", + "idna": "3.6", + "importlib-metadata": "7.0.1", + "ipykernel": "6.29.3", + 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"pandas": "2.2.1", + "parso": "0.8.3", + "pexpect": "4.9.0", + "physicsml": "0.1.1", + "pickleshare": "0.7.5", + "pillow": "10.2.0", + "pip": "23.3.1", + "platformdirs": "4.2.0", + "prompt-toolkit": "3.0.42", + "protobuf": "4.25.3", + "psutil": "5.9.0", + "ptyprocess": "0.7.0", + "pure-eval": "0.2.2", + "pyarrow": "15.0.0", + "pyarrow-hotfix": "0.6", + "pydantic": "1.10.14", + "pyparsing": "3.1.1", + "python-dateutil": "2.8.2", + "pytorch-lightning": "2.2.0.post0", + "pytz": "2024.1", + "pyzmq": "25.1.2", + "qlient": "1.0.0", + "qlient-core": "1.0.1", + "rapidfuzz": "3.6.1", + "rdkit": "2023.9.5", + "requests": "2.31.0", + "responses": "0.18.0", + "s3transfer": "0.10.0", + "scikit-learn": "1.4.1.post1", + "scipy": "1.12.0", + "setuptools": "68.2.2", + "six": "1.16.0", + "stack-data": "0.6.2", + "sympy": "1.12", + "tenacity": "8.2.3", + "tensorboard": "2.16.2", + "tensorboard-data-server": "0.7.2", + "thefuzz": "0.22.1", + "threadpoolctl": "3.3.0", + "torch": "2.0.1", + 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"edge_idxs_col": "physicsml_bond_idxs", + "max_nbins": 1000000, + "node_attrs_col": "physicsml_atom_features", + "node_idxs_col": "physicsml_atom_idxs", + "num_elements": 7, + "num_workers": 7, + "pbc": null, + "pre_batch": null, + "pre_batch_in_memory": false, + "predict": { + "batch_size": 1 + }, + "self_interaction": false, + "test": { + "batch_size": 1, + "mode": "max_size" + }, + "total_atomic_energy_col": "physicsml_total_atomic_energy", + "train": { + "batch_size": 128, + "drop_last": true, + "mode": "max_size_cycle" + }, + "train_batch_size": null, + "use_scaled_positions": false, + "validation": { + "batch_size": 128, + "mode": "max_size" + }, + "validation_batch_size": null, + "y_edge_scalars": null, + "y_edge_vector": null, + "y_graph_scalars": [ + "energies" + ], + "y_graph_vector": null, + "y_node_scalars": null, + "y_node_vector": null + }, + "float32_matmul_precision": null, + "hidden_irreps": "128x0e + 128x1o", + "max_ell": 3, + "mlp_irreps": "16x0e", + "num_bessel": 8, 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"default_root_dir": "training", + "detect_anomaly": false, + "deterministic": null, + "devices": 1, + "enable_checkpointing": true, + "enable_model_summary": true, + "enable_progress_bar": true, + "fast_dev_run": false, + "gradient_clip_algorithm": "norm", + "gradient_clip_val": 20.0, + "inference_mode": true, + "limit_predict_batches": null, + "limit_test_batches": null, + "limit_train_batches": null, + "limit_val_batches": null, + "log_every_n_steps": 50, + "logger": true, + "max_epochs": 350, + "max_steps": -1, + "max_time": null, + "min_epochs": null, + "min_steps": null, + "num_nodes": 1, + "num_sanity_val_steps": null, + "overfit_batches": 0.0, + "precision": 32, + "profiler": null, + "reload_dataloaders_every_n_epochs": 0, + "strategy": "auto", + "sync_batchnorm": false, + "use_distributed_sampler": true, + "val_check_interval": null + }, + "transfer_learning": null, + "x_features": [ + "physicsml_atom_idxs", + "physicsml_atom_numbers", + "physicsml_coordinates", + "physicsml_total_atomic_energy" + ], + "y_features": [ + "energies" + ], + "y_graph_scalars_loss_config": { + "name": "WeightedMSELoss" + }, + "y_graph_vector_loss_config": null, + "y_node_scalars_loss_config": null, + "y_node_vector_loss_config": null + }, + "name": "mace_model", + "tag": "mace_model", + "version": "0.3.0" +} \ No newline at end of file diff --git a/guardowl/tests/data/physics-ml/mace/requirements.txt b/guardowl/tests/data/physics-ml/mace/requirements.txt new file mode 100644 index 0000000..4117171 --- /dev/null +++ b/guardowl/tests/data/physics-ml/mace/requirements.txt @@ -0,0 +1,126 @@ +Jinja2==3.1.3 +Markdown==3.5.2 +MarkupSafe==2.1.5 +PyYAML==6.0.1 +Pygments==2.17.2 +Werkzeug==3.0.1 +absl-py==2.1.0 +aiohttp==3.9.3 +aiosignal==1.3.1 +asttokens==2.4.1 +attrs==23.2.0 +boto3==1.34.50 +botocore==1.34.50 +certifi==2024.2.2 +charset-normalizer==3.3.2 +cloudpathlib==0.18.1 +cmake==3.28.3 +colorama==0.4.6 +comm==0.2.1 +datasets==2.17.1 +debugpy==1.6.7 +decorator==5.1.1 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+98000,9.799999999990499,-21065452.67750217,-21064334.262703277,284.6865222799536,3.129017104032695,1.0038585834127232,0.497 +98500,9.849999999990382,-21065374.241847236,-21064218.736427207,294.1277420773372,3.1125769364816462,1.0091608148581308,0.497 +99000,9.899999999990266,-21065321.44646318,-21064187.622881435,288.60874577635536,3.1277518639160684,1.0042646649071687,0.497 +99500,9.94999999999015,-21065415.749152273,-21064260.509122565,294.0601883868359,3.1293626058771173,1.0037477509411339,0.497 +100000,9.999999999990033,-21065397.954137,-21064159.477409218,315.24764596011073,3.1400522304297342,1.0003307101355339,0.496 diff --git a/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_nnpops_npt_300K_300.dcd b/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_nnpops_npt_300K_300.dcd new file mode 100644 index 0000000..8e3051d Binary files /dev/null and b/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_nnpops_npt_300K_300.dcd differ diff --git a/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_nnpops_npt_300K_300.pdb b/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_nnpops_npt_300K_300.pdb new file mode 100644 index 0000000..27e99f5 --- /dev/null +++ b/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_nnpops_npt_300K_300.pdb @@ -0,0 +1,319 @@ +REMARK 1 CREATED WITH OPENMM 8.0, 2024-05-30 +CRYST1 15.000 15.000 15.000 90.00 90.00 90.00 P 1 1 +HETATM 1 O HOH A 1 -3.414 -3.888 -1.647 1.00 0.00 O +HETATM 2 H1 HOH A 1 -2.810 -4.099 -2.415 1.00 0.00 H +HETATM 3 H2 HOH A 1 -4.181 -3.333 -1.969 1.00 0.00 H +HETATM 4 O HOH A 2 3.000 1.063 -0.784 1.00 0.00 O +HETATM 5 H1 HOH A 2 2.511 1.541 -0.054 1.00 0.00 H +HETATM 6 H2 HOH A 2 3.670 0.439 -0.383 1.00 0.00 H +HETATM 7 O HOH A 3 -1.583 4.316 6.857 1.00 0.00 O +HETATM 8 H1 HOH A 3 -1.034 5.046 6.449 1.00 0.00 H +HETATM 9 H2 HOH A 3 -2.008 3.774 6.132 1.00 0.00 H +HETATM 10 O HOH A 4 4.615 -4.634 -0.487 1.00 0.00 O +HETATM 11 H1 HOH A 4 4.343 -3.693 -0.690 1.00 0.00 H +HETATM 12 H2 HOH A 4 4.316 -4.875 0.437 1.00 0.00 H +HETATM 13 O HOH A 5 -6.048 2.518 3.304 1.00 0.00 O +HETATM 14 H1 HOH A 5 -6.202 3.398 3.753 1.00 0.00 H +HETATM 15 H2 HOH A 5 -5.118 2.487 2.939 1.00 0.00 H +HETATM 16 O HOH A 6 3.518 5.106 -2.102 1.00 0.00 O +HETATM 17 H1 HOH A 6 3.279 4.193 -2.432 1.00 0.00 H +HETATM 18 H2 HOH A 6 2.846 5.768 -2.433 1.00 0.00 H +HETATM 19 O HOH A 7 3.486 -6.576 3.795 1.00 0.00 O +HETATM 20 H1 HOH A 7 4.479 -6.664 3.866 1.00 0.00 H +HETATM 21 H2 HOH A 7 3.069 -6.788 4.679 1.00 0.00 H +HETATM 22 O HOH A 8 6.777 -3.528 -1.995 1.00 0.00 O +HETATM 23 H1 HOH A 8 6.949 -2.608 -1.642 1.00 0.00 H +HETATM 24 H2 HOH A 8 6.411 -4.102 -1.262 1.00 0.00 H +HETATM 25 O HOH A 9 1.505 -0.210 -3.110 1.00 0.00 O +HETATM 26 H1 HOH A 9 2.006 0.288 -2.403 1.00 0.00 H +HETATM 27 H2 HOH A 9 0.669 0.288 -3.340 1.00 0.00 H +HETATM 28 O HOH A 10 0.367 -3.730 -1.356 1.00 0.00 O +HETATM 29 H1 HOH A 10 1.144 -3.734 -1.986 1.00 0.00 H +HETATM 30 H2 HOH A 10 -0.477 -3.578 -1.870 1.00 0.00 H +HETATM 31 O HOH A 11 -1.776 -4.741 3.797 1.00 0.00 O +HETATM 32 H1 HOH A 11 -1.416 -5.383 3.120 1.00 0.00 H +HETATM 33 H2 HOH A 11 -1.037 -4.154 4.127 1.00 0.00 H +HETATM 34 O HOH A 12 1.983 -4.794 6.359 1.00 0.00 O +HETATM 35 H1 HOH A 12 2.893 -4.429 6.559 1.00 0.00 H +HETATM 36 H2 HOH A 12 1.814 -5.598 6.929 1.00 0.00 H +HETATM 37 O HOH A 13 4.394 5.481 4.825 1.00 0.00 O +HETATM 38 H1 HOH A 13 5.011 6.268 4.822 1.00 0.00 H +HETATM 39 H2 HOH A 13 3.524 5.737 4.404 1.00 0.00 H +HETATM 40 O HOH A 14 2.354 -1.294 -7.416 1.00 0.00 O +HETATM 41 H1 HOH A 14 1.381 -1.090 -7.526 1.00 0.00 H +HETATM 42 H2 HOH A 14 2.504 -1.735 -6.531 1.00 0.00 H +HETATM 43 O HOH A 15 1.550 6.819 0.233 1.00 0.00 O +HETATM 44 H1 HOH A 15 1.713 7.723 0.629 1.00 0.00 H +HETATM 45 H2 HOH A 15 2.345 6.544 -0.307 1.00 0.00 H +HETATM 46 O HOH A 16 6.948 3.313 3.756 1.00 0.00 O +HETATM 47 H1 HOH A 16 7.872 3.182 4.114 1.00 0.00 H +HETATM 48 H2 HOH A 16 6.795 4.285 3.575 1.00 0.00 H +HETATM 49 O HOH A 17 2.426 4.504 -6.771 1.00 0.00 O +HETATM 50 H1 HOH A 17 2.917 5.348 -6.554 1.00 0.00 H +HETATM 51 H2 HOH A 17 1.833 4.657 -7.561 1.00 0.00 H +HETATM 52 O HOH A 18 -2.005 -0.780 -4.333 1.00 0.00 O +HETATM 53 H1 HOH A 18 -1.533 -0.535 -3.487 1.00 0.00 H +HETATM 54 H2 HOH A 18 -1.352 -1.181 -4.975 1.00 0.00 H +HETATM 55 O HOH A 19 -5.422 5.164 1.379 1.00 0.00 O +HETATM 56 H1 HOH A 19 -5.140 5.995 0.900 1.00 0.00 H +HETATM 57 H2 HOH A 19 -5.482 4.408 0.728 1.00 0.00 H +HETATM 58 O HOH A 20 -4.875 5.710 -3.642 1.00 0.00 O +HETATM 59 H1 HOH A 20 -4.256 5.345 -2.946 1.00 0.00 H +HETATM 60 H2 HOH A 20 -5.320 4.954 -4.122 1.00 0.00 H +HETATM 61 O HOH A 21 -3.525 -5.857 0.384 1.00 0.00 O +HETATM 62 H1 HOH A 21 -2.904 -5.666 1.144 1.00 0.00 H +HETATM 63 H2 HOH A 21 -3.563 -5.063 -0.223 1.00 0.00 H +HETATM 64 O HOH A 22 -1.091 -6.208 1.809 1.00 0.00 O +HETATM 65 H1 HOH A 22 -1.067 -7.208 1.788 1.00 0.00 H +HETATM 66 H2 HOH A 22 -0.331 -5.846 1.269 1.00 0.00 H +HETATM 67 O HOH A 23 -1.515 -0.304 3.001 1.00 0.00 O +HETATM 68 H1 HOH A 23 -0.929 -0.905 2.458 1.00 0.00 H +HETATM 69 H2 HOH A 23 -1.124 -0.196 3.916 1.00 0.00 H +HETATM 70 O HOH A 24 -5.640 0.452 0.459 1.00 0.00 O +HETATM 71 H1 HOH A 24 -5.242 -0.265 1.030 1.00 0.00 H +HETATM 72 H2 HOH A 24 -6.528 0.148 0.112 1.00 0.00 H +HETATM 73 O HOH A 25 -6.987 0.396 6.850 1.00 0.00 O +HETATM 74 H1 HOH A 25 -7.974 0.547 6.797 1.00 0.00 H +HETATM 75 H2 HOH A 25 -6.621 0.253 5.930 1.00 0.00 H +HETATM 76 O HOH A 26 -6.001 -4.723 1.288 1.00 0.00 O +HETATM 77 H1 HOH A 26 -5.842 -4.882 2.263 1.00 0.00 H +HETATM 78 H2 HOH A 26 -5.358 -5.270 0.752 1.00 0.00 H +HETATM 79 O HOH A 27 2.917 -2.096 1.610 1.00 0.00 O +HETATM 80 H1 HOH A 27 1.951 -1.878 1.756 1.00 0.00 H +HETATM 81 H2 HOH A 27 3.050 -3.084 1.677 1.00 0.00 H +HETATM 82 O HOH A 28 5.159 4.568 1.170 1.00 0.00 O +HETATM 83 H1 HOH A 28 4.773 5.482 1.299 1.00 0.00 H +HETATM 84 H2 HOH A 28 4.467 3.881 1.390 1.00 0.00 H +HETATM 85 O HOH A 29 0.789 1.379 6.731 1.00 0.00 O +HETATM 86 H1 HOH A 29 0.725 2.228 6.206 1.00 0.00 H +HETATM 87 H2 HOH A 29 1.747 1.193 6.947 1.00 0.00 H +HETATM 88 O HOH A 30 2.893 -4.778 1.838 1.00 0.00 O +HETATM 89 H1 HOH A 30 2.925 -5.393 2.626 1.00 0.00 H +HETATM 90 H2 HOH A 30 2.172 -5.076 1.213 1.00 0.00 H +HETATM 91 O HOH A 31 -0.493 -0.670 5.527 1.00 0.00 O +HETATM 92 H1 HOH A 31 -0.228 -1.467 6.069 1.00 0.00 H +HETATM 93 H2 HOH A 31 0.084 0.108 5.774 1.00 0.00 H +HETATM 94 O HOH A 32 6.600 0.720 2.403 1.00 0.00 O +HETATM 95 H1 HOH A 32 6.565 1.229 1.543 1.00 0.00 H +HETATM 96 H2 HOH A 32 6.581 1.360 3.170 1.00 0.00 H +HETATM 97 O HOH A 33 -2.263 -6.619 -5.112 1.00 0.00 O +HETATM 98 H1 HOH A 33 -2.510 -6.972 -6.014 1.00 0.00 H +HETATM 99 H2 HOH A 33 -1.805 -7.336 -4.587 1.00 0.00 H +HETATM 100 O HOH A 34 -2.536 4.180 -5.167 1.00 0.00 O +HETATM 101 H1 HOH A 34 -1.886 4.902 -4.931 1.00 0.00 H +HETATM 102 H2 HOH A 34 -3.185 4.524 -5.847 1.00 0.00 H +HETATM 103 O HOH A 35 6.893 6.072 2.580 1.00 0.00 O +HETATM 104 H1 HOH A 35 7.546 6.731 2.207 1.00 0.00 H +HETATM 105 H2 HOH A 35 6.560 5.481 1.846 1.00 0.00 H +HETATM 106 O HOH A 36 1.251 -5.892 -0.082 1.00 0.00 O +HETATM 107 H1 HOH A 36 1.158 -6.713 -0.645 1.00 0.00 H +HETATM 108 H2 HOH A 36 0.818 -5.119 -0.546 1.00 0.00 H +HETATM 109 O HOH A 37 -3.384 1.111 -0.959 1.00 0.00 O +HETATM 110 H1 HOH A 37 -4.056 0.784 -0.294 1.00 0.00 H +HETATM 111 H2 HOH A 37 -3.791 1.108 -1.872 1.00 0.00 H +HETATM 112 O HOH A 38 -2.539 -3.106 0.963 1.00 0.00 O +HETATM 113 H1 HOH A 38 -2.487 -3.337 -0.009 1.00 0.00 H +HETATM 114 H2 HOH A 38 -3.294 -2.468 1.114 1.00 0.00 H +HETATM 115 O HOH A 39 2.665 -3.592 -3.230 1.00 0.00 O +HETATM 116 H1 HOH A 39 3.048 -2.791 -3.689 1.00 0.00 H +HETATM 117 H2 HOH A 39 3.369 -4.021 -2.664 1.00 0.00 H +HETATM 118 O HOH A 40 -0.696 0.084 -0.214 1.00 0.00 O +HETATM 119 H1 HOH A 40 -1.668 0.126 -0.445 1.00 0.00 H +HETATM 120 H2 HOH A 40 -0.452 -0.853 0.034 1.00 0.00 H +HETATM 121 O HOH A 41 3.749 3.020 3.816 1.00 0.00 O +HETATM 122 H1 HOH A 41 4.331 3.790 4.077 1.00 0.00 H +HETATM 123 H2 HOH A 41 3.950 2.236 4.404 1.00 0.00 H +HETATM 124 O HOH A 42 -3.154 2.670 4.914 1.00 0.00 O +HETATM 125 H1 HOH A 42 -3.151 1.943 5.601 1.00 0.00 H +HETATM 126 H2 HOH A 42 -2.809 2.312 4.047 1.00 0.00 H +HETATM 127 O HOH A 43 1.026 -5.698 -5.495 1.00 0.00 O +HETATM 128 H1 HOH A 43 1.641 -5.339 -6.197 1.00 0.00 H +HETATM 129 H2 HOH A 43 0.365 -4.992 -5.239 1.00 0.00 H +HETATM 130 O HOH A 44 1.259 3.238 -4.715 1.00 0.00 O +HETATM 131 H1 HOH A 44 1.977 2.992 -4.063 1.00 0.00 H +HETATM 132 H2 HOH A 44 1.675 3.491 -5.588 1.00 0.00 H +HETATM 133 O HOH A 45 -5.947 3.493 -0.829 1.00 0.00 O +HETATM 134 H1 HOH A 45 -6.280 2.628 -0.454 1.00 0.00 H +HETATM 135 H2 HOH A 45 -4.998 3.384 -1.125 1.00 0.00 H +HETATM 136 O HOH A 46 -5.363 -1.946 1.661 1.00 0.00 O +HETATM 137 H1 HOH A 46 -5.614 -2.913 1.684 1.00 0.00 H +HETATM 138 H2 HOH A 46 -4.943 -1.689 2.532 1.00 0.00 H +HETATM 139 O HOH A 47 -5.943 0.119 4.330 1.00 0.00 O +HETATM 140 H1 HOH A 47 -5.963 0.981 3.824 1.00 0.00 H +HETATM 141 H2 HOH A 47 -5.033 -0.289 4.257 1.00 0.00 H +HETATM 142 O HOH A 48 2.319 6.287 3.085 1.00 0.00 O +HETATM 143 H1 HOH A 48 2.077 7.153 2.648 1.00 0.00 H +HETATM 144 H2 HOH A 48 2.392 5.572 2.391 1.00 0.00 H +HETATM 145 O HOH A 49 -3.832 -1.491 3.670 1.00 0.00 O +HETATM 146 H1 HOH A 49 -2.995 -0.965 3.822 1.00 0.00 H +HETATM 147 H2 HOH A 49 -3.692 -2.435 3.967 1.00 0.00 H +HETATM 148 O HOH A 50 3.234 2.772 -2.914 1.00 0.00 O +HETATM 149 H1 HOH A 50 3.270 2.362 -2.003 1.00 0.00 H +HETATM 150 H2 HOH A 50 4.117 2.650 -3.369 1.00 0.00 H +HETATM 151 O HOH A 51 -4.750 4.975 4.063 1.00 0.00 O +HETATM 152 H1 HOH A 51 -4.780 4.903 3.066 1.00 0.00 H +HETATM 153 H2 HOH A 51 -4.016 4.394 4.416 1.00 0.00 H +HETATM 154 O HOH A 52 -4.899 3.343 7.257 1.00 0.00 O +HETATM 155 H1 HOH A 52 -4.901 2.563 7.882 1.00 0.00 H +HETATM 156 H2 HOH A 52 -4.461 3.080 6.397 1.00 0.00 H +HETATM 157 O HOH A 53 0.719 2.187 0.831 1.00 0.00 O +HETATM 158 H1 HOH A 53 0.041 2.896 0.634 1.00 0.00 H +HETATM 159 H2 HOH A 53 0.339 1.290 0.604 1.00 0.00 H +HETATM 160 O HOH A 54 -1.518 3.261 -1.523 1.00 0.00 O +HETATM 161 H1 HOH A 54 -2.175 4.015 -1.536 1.00 0.00 H +HETATM 162 H2 HOH A 54 -1.997 2.404 -1.332 1.00 0.00 H +HETATM 163 O HOH A 55 -3.171 0.164 6.198 1.00 0.00 O +HETATM 164 H1 HOH A 55 -2.373 -0.407 6.004 1.00 0.00 H +HETATM 165 H2 HOH A 55 -3.295 0.238 7.187 1.00 0.00 H +HETATM 166 O HOH A 56 1.265 3.665 5.160 1.00 0.00 O +HETATM 167 H1 HOH A 56 0.512 3.811 4.518 1.00 0.00 H +HETATM 168 H2 HOH A 56 2.102 3.465 4.652 1.00 0.00 H +HETATM 169 O HOH A 57 -4.097 -3.839 4.687 1.00 0.00 O +HETATM 170 H1 HOH A 57 -4.701 -4.554 4.334 1.00 0.00 H +HETATM 171 H2 HOH A 57 -3.160 -4.016 4.386 1.00 0.00 H +HETATM 172 O HOH A 58 4.821 -6.994 -6.658 1.00 0.00 O +HETATM 173 H1 HOH A 58 4.022 -7.123 -7.246 1.00 0.00 H +HETATM 174 H2 HOH A 58 4.691 -7.497 -5.804 1.00 0.00 H +HETATM 175 O HOH A 59 -0.492 4.491 0.765 1.00 0.00 O +HETATM 176 H1 HOH A 59 0.366 5.000 0.687 1.00 0.00 H +HETATM 177 H2 HOH A 59 -0.835 4.273 -0.148 1.00 0.00 H +HETATM 178 O HOH A 60 -0.035 -2.299 1.940 1.00 0.00 O +HETATM 179 H1 HOH A 60 -0.950 -2.670 1.786 1.00 0.00 H +HETATM 180 H2 HOH A 60 0.413 -2.811 2.673 1.00 0.00 H +HETATM 181 O HOH A 61 6.210 1.919 0.045 1.00 0.00 O +HETATM 182 H1 HOH A 61 5.879 2.832 0.283 1.00 0.00 H +HETATM 183 H2 HOH A 61 6.396 1.878 -0.937 1.00 0.00 H +HETATM 184 O HOH A 62 -0.837 4.301 3.643 1.00 0.00 O +HETATM 185 H1 HOH A 62 -0.822 5.186 4.109 1.00 0.00 H +HETATM 186 H2 HOH A 62 -0.843 4.446 2.653 1.00 0.00 H +HETATM 187 O HOH A 63 1.103 -3.378 4.143 1.00 0.00 O +HETATM 188 H1 HOH A 63 1.255 -4.049 4.868 1.00 0.00 H +HETATM 189 H2 HOH A 63 1.593 -2.534 4.361 1.00 0.00 H +HETATM 190 O HOH A 64 -3.221 5.726 -1.262 1.00 0.00 O +HETATM 191 H1 HOH A 64 -3.778 6.392 -0.766 1.00 0.00 H +HETATM 192 H2 HOH A 64 -2.438 6.189 -1.678 1.00 0.00 H +HETATM 193 O HOH A 65 6.151 -7.395 4.350 1.00 0.00 O +HETATM 194 H1 HOH A 65 6.444 -6.480 4.075 1.00 0.00 H +HETATM 195 H2 HOH A 65 6.845 -8.062 4.078 1.00 0.00 H +HETATM 196 O HOH A 66 5.337 -1.064 0.623 1.00 0.00 O +HETATM 197 H1 HOH A 66 4.453 -1.365 0.980 1.00 0.00 H +HETATM 198 H2 HOH A 66 5.843 -0.587 1.342 1.00 0.00 H +HETATM 199 O HOH A 67 -7.607 -1.198 -0.563 1.00 0.00 O +HETATM 200 H1 HOH A 67 -7.199 -1.700 0.200 1.00 0.00 H +HETATM 201 H2 HOH A 67 -7.162 -1.468 -1.416 1.00 0.00 H +HETATM 202 O HOH A 68 3.405 6.822 -5.973 1.00 0.00 O +HETATM 203 H1 HOH A 68 2.786 7.577 -6.191 1.00 0.00 H +HETATM 204 H2 HOH A 68 4.342 7.167 -5.909 1.00 0.00 H +HETATM 205 O HOH A 69 3.581 -1.319 -4.405 1.00 0.00 O +HETATM 206 H1 HOH A 69 4.342 -0.702 -4.209 1.00 0.00 H +HETATM 207 H2 HOH A 69 2.734 -0.928 -4.044 1.00 0.00 H +HETATM 208 O HOH A 70 -5.975 6.679 5.773 1.00 0.00 O +HETATM 209 H1 HOH A 70 -5.543 6.008 5.170 1.00 0.00 H +HETATM 210 H2 HOH A 70 -6.023 6.310 6.701 1.00 0.00 H +HETATM 211 O HOH A 71 2.596 -1.122 4.892 1.00 0.00 O +HETATM 212 H1 HOH A 71 2.245 -0.582 4.127 1.00 0.00 H +HETATM 213 H2 HOH A 71 3.163 -0.542 5.477 1.00 0.00 H +HETATM 214 O HOH A 72 -0.687 6.586 5.623 1.00 0.00 O +HETATM 215 H1 HOH A 72 -1.619 6.884 5.831 1.00 0.00 H +HETATM 216 H2 HOH A 72 -0.089 7.384 5.558 1.00 0.00 H +HETATM 217 O HOH A 73 7.366 2.939 -2.315 1.00 0.00 O +HETATM 218 H1 HOH A 73 6.620 2.687 -2.932 1.00 0.00 H +HETATM 219 H2 HOH A 73 7.975 3.585 -2.776 1.00 0.00 H +HETATM 220 O HOH A 74 -7.630 -0.065 -4.948 1.00 0.00 O +HETATM 221 H1 HOH A 74 -6.740 -0.399 -4.637 1.00 0.00 H +HETATM 222 H2 HOH A 74 -7.756 -0.299 -5.912 1.00 0.00 H +HETATM 223 O HOH A 75 0.329 -3.247 -4.423 1.00 0.00 O +HETATM 224 H1 HOH A 75 0.415 -2.643 -5.215 1.00 0.00 H +HETATM 225 H2 HOH A 75 1.237 -3.438 -4.049 1.00 0.00 H +HETATM 226 O HOH A 76 2.585 3.902 1.709 1.00 0.00 O +HETATM 227 H1 HOH A 76 1.820 3.424 1.278 1.00 0.00 H +HETATM 228 H2 HOH A 76 2.922 3.364 2.482 1.00 0.00 H +HETATM 229 O HOH A 77 -4.285 5.485 -6.868 1.00 0.00 O +HETATM 230 H1 HOH A 77 -5.063 5.954 -6.449 1.00 0.00 H +HETATM 231 H2 HOH A 77 -4.618 4.767 -7.478 1.00 0.00 H +HETATM 232 O HOH A 78 5.351 -2.977 -6.041 1.00 0.00 O +HETATM 233 H1 HOH A 78 4.708 -2.269 -5.752 1.00 0.00 H +HETATM 234 H2 HOH A 78 4.992 -3.876 -5.790 1.00 0.00 H +HETATM 235 O HOH A 79 -0.353 -3.432 6.975 1.00 0.00 O +HETATM 236 H1 HOH A 79 0.611 -3.679 6.873 1.00 0.00 H +HETATM 237 H2 HOH A 79 -0.902 -4.263 7.064 1.00 0.00 H +HETATM 238 O HOH A 80 2.044 7.265 -3.004 1.00 0.00 O +HETATM 239 H1 HOH A 80 2.360 7.293 -3.953 1.00 0.00 H +HETATM 240 H2 HOH A 80 1.160 7.727 -2.933 1.00 0.00 H +HETATM 241 O HOH A 81 4.208 -7.486 -1.878 1.00 0.00 O +HETATM 242 H1 HOH A 81 4.541 -6.579 -1.622 1.00 0.00 H +HETATM 243 H2 HOH A 81 3.526 -7.791 -1.214 1.00 0.00 H +HETATM 244 O HOH A 82 -0.193 5.402 -4.370 1.00 0.00 O +HETATM 245 H1 HOH A 82 0.174 4.489 -4.549 1.00 0.00 H +HETATM 246 H2 HOH A 82 -0.046 5.637 -3.409 1.00 0.00 H +HETATM 247 O HOH A 83 -0.525 6.814 -1.790 1.00 0.00 O +HETATM 248 H1 HOH A 83 -0.399 7.594 -2.403 1.00 0.00 H +HETATM 249 H2 HOH A 83 -0.023 6.973 -0.940 1.00 0.00 H +HETATM 250 O HOH A 84 6.407 -5.010 3.351 1.00 0.00 O +HETATM 251 H1 HOH A 84 5.611 -4.607 3.802 1.00 0.00 H +HETATM 252 H2 HOH A 84 6.627 -4.483 2.530 1.00 0.00 H +HETATM 253 O HOH A 85 -3.848 -6.475 -2.868 1.00 0.00 O +HETATM 254 H1 HOH A 85 -3.937 -5.527 -2.561 1.00 0.00 H +HETATM 255 H2 HOH A 85 -3.710 -6.493 -3.858 1.00 0.00 H +HETATM 256 O HOH A 86 4.569 -3.276 4.948 1.00 0.00 O +HETATM 257 H1 HOH A 86 4.943 -3.364 5.871 1.00 0.00 H +HETATM 258 H2 HOH A 86 3.759 -2.690 4.971 1.00 0.00 H +HETATM 259 O HOH A 87 5.624 2.333 -4.084 1.00 0.00 O +HETATM 260 H1 HOH A 87 5.420 2.422 -5.059 1.00 0.00 H +HETATM 261 H2 HOH A 87 5.694 1.365 -3.846 1.00 0.00 H +HETATM 262 O HOH A 88 -1.619 -4.747 -3.338 1.00 0.00 O +HETATM 263 H1 HOH A 88 -1.801 -5.354 -4.111 1.00 0.00 H +HETATM 264 H2 HOH A 88 -0.753 -4.270 -3.485 1.00 0.00 H +HETATM 265 O HOH A 89 5.443 2.224 -7.004 1.00 0.00 O +HETATM 266 H1 HOH A 89 5.176 3.101 -7.403 1.00 0.00 H +HETATM 267 H2 HOH A 89 4.864 1.499 -7.375 1.00 0.00 H +HETATM 268 O HOH A 90 -4.340 -2.527 7.152 1.00 0.00 O +HETATM 269 H1 HOH A 90 -5.301 -2.274 7.267 1.00 0.00 H +HETATM 270 H2 HOH A 90 -4.216 -2.968 6.264 1.00 0.00 H +HETATM 271 O HOH A 91 -4.347 2.616 -3.538 1.00 0.00 O +HETATM 272 H1 HOH A 91 -3.660 2.987 -4.162 1.00 0.00 H +HETATM 273 H2 HOH A 91 -5.211 2.493 -4.027 1.00 0.00 H +HETATM 274 O HOH A 92 -6.378 -7.215 -2.360 1.00 0.00 O +HETATM 275 H1 HOH A 92 -6.686 -7.407 -1.428 1.00 0.00 H +HETATM 276 H2 HOH A 92 -5.379 -7.200 -2.385 1.00 0.00 H +HETATM 277 O HOH A 93 6.878 -3.269 1.211 1.00 0.00 O +HETATM 278 H1 HOH A 93 6.156 -2.620 0.972 1.00 0.00 H +HETATM 279 H2 HOH A 93 7.698 -2.768 1.489 1.00 0.00 H +HETATM 280 O HOH A 94 -2.008 1.804 -5.798 1.00 0.00 O +HETATM 281 H1 HOH A 94 -2.149 2.769 -5.579 1.00 0.00 H +HETATM 282 H2 HOH A 94 -1.660 1.326 -4.992 1.00 0.00 H +HETATM 283 O HOH A 95 6.372 -0.938 6.116 1.00 0.00 O +HETATM 284 H1 HOH A 95 6.957 -0.900 6.926 1.00 0.00 H +HETATM 285 H2 HOH A 95 5.946 -1.841 6.055 1.00 0.00 H +HETATM 286 O HOH A 96 -2.701 2.203 2.209 1.00 0.00 O +HETATM 287 H1 HOH A 96 -2.218 1.329 2.257 1.00 0.00 H +HETATM 288 H2 HOH A 96 -2.291 2.772 1.496 1.00 0.00 H +HETATM 289 O HOH A 97 -0.316 -1.042 -6.558 1.00 0.00 O +HETATM 290 H1 HOH A 97 -0.420 -0.142 -6.980 1.00 0.00 H +HETATM 291 H2 HOH A 97 -0.791 -1.727 -7.111 1.00 0.00 H +HETATM 292 O HOH A 98 -4.890 -1.806 -4.927 1.00 0.00 O +HETATM 293 H1 HOH A 98 -4.064 -1.410 -4.526 1.00 0.00 H +HETATM 294 H2 HOH A 98 -4.981 -1.497 -5.874 1.00 0.00 H +HETATM 295 O HOH A 99 -5.964 -6.596 -5.481 1.00 0.00 O +HETATM 296 H1 HOH A 99 -5.827 -6.907 -4.541 1.00 0.00 H +HETATM 297 H2 HOH A 99 -6.940 -6.449 -5.644 1.00 0.00 H +HETATM 298 O HOH A 100 -5.784 -5.828 3.805 1.00 0.00 O +HETATM 299 H1 HOH A 100 -6.405 -5.903 4.585 1.00 0.00 H +HETATM 300 H2 HOH A 100 -5.352 -6.714 3.636 1.00 0.00 H +HETATM 301 O HOH A 101 -6.542 3.405 -5.032 1.00 0.00 O +HETATM 302 H1 HOH A 101 -7.493 3.711 -4.976 1.00 0.00 H +HETATM 303 H2 HOH A 101 -6.271 3.334 -5.992 1.00 0.00 H +HETATM 304 O HOH A 102 -0.412 1.513 -3.261 1.00 0.00 O +HETATM 305 H1 HOH A 102 -0.566 2.167 -2.520 1.00 0.00 H +HETATM 306 H2 HOH A 102 -0.024 1.990 -4.050 1.00 0.00 H +HETATM 307 O HOH A 103 -5.856 -2.988 -2.609 1.00 0.00 O +HETATM 308 H1 HOH A 103 -5.508 -2.587 -3.456 1.00 0.00 H +HETATM 309 H2 HOH A 103 -6.690 -3.506 -2.804 1.00 0.00 H +HETATM 310 O HOH A 104 4.430 1.170 6.189 1.00 0.00 O +HETATM 311 H1 HOH A 104 5.212 0.606 5.925 1.00 0.00 H +HETATM 312 H2 HOH A 104 3.959 0.745 6.963 1.00 0.00 H +HETATM 313 O HOH A 105 -0.701 7.266 -6.405 1.00 0.00 O +HETATM 314 H1 HOH A 105 -0.473 6.725 -5.596 1.00 0.00 H +HETATM 315 H2 HOH A 105 -1.205 8.084 -6.129 1.00 0.00 H +TER 316 HOH A 105 +END diff --git a/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.csv b/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.csv deleted file mode 100644 index 0ca360e..0000000 --- a/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.csv +++ /dev/null @@ -1,11 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Box Volume (nm^3)","Density (g/mL)","Speed (ns/day)" -500,0.5000000000000003,-20424856.029846653,-20385324.23921463,10358.565486643509,3.2424657876306457,0.9410570317316302,0 -1000,1.0000000000000007,-20395032.803638186,-20301088.811558906,24616.26398581748,3.055976878004151,0.998484396777204,3.16 -1500,1.4999999999999456,-20403432.766953293,-20299076.73041912,27344.545265554847,2.9991231106332297,1.0174124625897074,2 -2000,1.9999999999998905,-20410418.78898326,-20360846.48705477,12989.493459321226,3.1543832460232086,0.9673349721996995,2.23 -2500,2.4999999999998357,-20411714.8680257,-20390811.736160267,5477.2742858924175,3.2155714513070452,0.9489278269213287,2.61 -3000,2.9999999999997806,-20412298.380272612,-20402840.487106994,2478.2638012447806,3.334287012580908,0.9151417433729442,2.86 -3500,3.4999999999997256,-20412408.54561409,-20408113.62390928,1125.4038086307096,3.3246845474717053,0.917784886364479,3.07 -4000,3.9999999999996705,-20412558.94817175,-20410175.18990288,624.6192175372217,3.3969984411582215,0.8982474624152869,3.19 -4500,4.4999999999998375,-20412578.308106754,-20410864.726182614,449.01205571893405,3.487390440793256,0.8749651871228352,3.31 -5000,5.000000000000004,-20412640.22885076,-20411238.808183026,367.21604382115714,3.642131052544587,0.8377911682961616,3.4 diff --git a/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.dcd b/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.dcd deleted file mode 100644 index ebadff4..0000000 Binary files a/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.dcd and /dev/null differ diff --git a/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.pdb b/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.pdb deleted file mode 100644 index 34d05ca..0000000 --- a/guardowl/tests/data/stability_testing/waterbox/waterbox_15A_ani2x_torchani_npt.pdb +++ /dev/null @@ -1,310 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-11-01 -CRYST1 15.000 15.000 15.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -7.363 0.985 16.870 1.00 0.00 O -HETATM 2 H1 HOH A 1 -7.193 0.043 16.851 1.00 0.00 H -HETATM 3 H2 HOH A 1 -6.854 1.306 17.614 1.00 0.00 H -HETATM 4 O HOH A 2 9.869 6.994 13.612 1.00 0.00 O -HETATM 5 H1 HOH A 2 9.180 7.274 13.009 1.00 0.00 H -HETATM 6 H2 HOH A 2 10.531 6.592 13.050 1.00 0.00 H -HETATM 7 O HOH A 3 5.869 -2.684 -4.294 1.00 0.00 O -HETATM 8 H1 HOH A 3 6.815 -2.677 -4.151 1.00 0.00 H -HETATM 9 H2 HOH A 3 5.562 -3.462 -3.828 1.00 0.00 H -HETATM 10 O HOH A 4 -0.330 8.295 -8.789 1.00 0.00 O -HETATM 11 H1 HOH A 4 -0.770 8.682 -9.545 1.00 0.00 H -HETATM 12 H2 HOH A 4 0.113 9.031 -8.366 1.00 0.00 H -HETATM 13 O HOH A 5 5.756 22.863 1.829 1.00 0.00 O -HETATM 14 H1 HOH A 5 5.143 22.744 2.554 1.00 0.00 H -HETATM 15 H2 HOH A 5 6.071 21.980 1.633 1.00 0.00 H -HETATM 16 O HOH A 6 4.296 -7.491 -10.552 1.00 0.00 O -HETATM 17 H1 HOH A 6 4.433 -8.324 -10.099 1.00 0.00 H -HETATM 18 H2 HOH A 6 4.595 -6.828 -9.929 1.00 0.00 H -HETATM 19 O HOH A 7 6.178 -17.091 0.272 1.00 0.00 O -HETATM 20 H1 HOH A 7 5.541 -17.773 0.487 1.00 0.00 H -HETATM 21 H2 HOH A 7 6.955 -17.319 0.781 1.00 0.00 H -HETATM 22 O HOH A 8 -13.508 3.512 8.603 1.00 0.00 O -HETATM 23 H1 HOH A 8 -13.098 2.942 7.952 1.00 0.00 H -HETATM 24 H2 HOH A 8 -13.515 4.377 8.195 1.00 0.00 H -HETATM 25 O HOH A 9 14.635 -11.890 4.067 1.00 0.00 O -HETATM 26 H1 HOH A 9 14.417 -11.554 4.936 1.00 0.00 H -HETATM 27 H2 HOH A 9 15.592 -11.925 4.056 1.00 0.00 H -HETATM 28 O HOH A 10 -16.878 -16.928 8.339 1.00 0.00 O -HETATM 29 H1 HOH A 10 -16.474 -16.997 7.474 1.00 0.00 H -HETATM 30 H2 HOH A 10 -16.166 -17.111 8.951 1.00 0.00 H -HETATM 31 O HOH A 11 3.281 6.500 9.789 1.00 0.00 O -HETATM 32 H1 HOH A 11 2.923 5.922 10.463 1.00 0.00 H -HETATM 33 H2 HOH A 11 2.516 6.947 9.426 1.00 0.00 H -HETATM 34 O HOH A 12 -6.111 1.430 14.402 1.00 0.00 O -HETATM 35 H1 HOH A 12 -6.995 1.127 14.196 1.00 0.00 H -HETATM 36 H2 HOH A 12 -6.103 1.515 15.355 1.00 0.00 H -HETATM 37 O HOH A 13 23.420 3.603 12.311 1.00 0.00 O -HETATM 38 H1 HOH A 13 22.692 3.047 12.591 1.00 0.00 H -HETATM 39 H2 HOH A 13 23.964 3.697 13.093 1.00 0.00 H -HETATM 40 O HOH A 14 14.856 -7.078 3.157 1.00 0.00 O -HETATM 41 H1 HOH A 14 14.627 -6.203 3.472 1.00 0.00 H -HETATM 42 H2 HOH A 14 15.678 -6.955 2.683 1.00 0.00 H -HETATM 43 O HOH A 15 9.741 2.107 18.935 1.00 0.00 O -HETATM 44 H1 HOH A 15 10.648 1.907 18.705 1.00 0.00 H -HETATM 45 H2 HOH A 15 9.807 2.663 19.712 1.00 0.00 H -HETATM 46 O HOH A 16 -1.491 7.963 10.459 1.00 0.00 O -HETATM 47 H1 HOH A 16 -2.037 7.270 10.832 1.00 0.00 H -HETATM 48 H2 HOH A 16 -1.005 8.313 11.205 1.00 0.00 H -HETATM 49 O HOH A 17 4.296 -0.275 18.125 1.00 0.00 O -HETATM 50 H1 HOH A 17 4.124 -0.984 17.505 1.00 0.00 H -HETATM 51 H2 HOH A 17 5.072 -0.561 18.608 1.00 0.00 H -HETATM 52 O HOH A 18 8.368 -2.739 16.770 1.00 0.00 O -HETATM 53 H1 HOH A 18 9.137 -2.793 16.203 1.00 0.00 H -HETATM 54 H2 HOH A 18 8.617 -2.118 17.455 1.00 0.00 H -HETATM 55 O HOH A 19 -0.022 4.423 16.658 1.00 0.00 O -HETATM 56 H1 HOH A 19 0.265 3.633 16.200 1.00 0.00 H -HETATM 57 H2 HOH A 19 -0.122 4.148 17.570 1.00 0.00 H -HETATM 58 O HOH A 20 7.282 -5.094 0.486 1.00 0.00 O -HETATM 59 H1 HOH A 20 7.938 -4.628 1.005 1.00 0.00 H -HETATM 60 H2 HOH A 20 6.687 -5.471 1.135 1.00 0.00 H -HETATM 61 O HOH A 21 -1.024 -10.558 6.554 1.00 0.00 O -HETATM 62 H1 HOH A 21 -1.326 -10.091 5.775 1.00 0.00 H -HETATM 63 H2 HOH A 21 -0.161 -10.187 6.737 1.00 0.00 H -HETATM 64 O HOH A 22 28.381 6.019 4.307 1.00 0.00 O -HETATM 65 H1 HOH A 22 28.951 6.657 3.877 1.00 0.00 H -HETATM 66 H2 HOH A 22 27.502 6.235 3.996 1.00 0.00 H -HETATM 67 O HOH A 23 -2.769 15.452 -9.154 1.00 0.00 O -HETATM 68 H1 HOH A 23 -3.505 14.842 -9.098 1.00 0.00 H -HETATM 69 H2 HOH A 23 -2.676 15.796 -8.265 1.00 0.00 H -HETATM 70 O HOH A 24 5.249 2.354 2.582 1.00 0.00 O -HETATM 71 H1 HOH A 24 6.070 2.028 2.213 1.00 0.00 H -HETATM 72 H2 HOH A 24 4.689 1.580 2.643 1.00 0.00 H -HETATM 73 O HOH A 25 8.282 14.294 18.992 1.00 0.00 O -HETATM 74 H1 HOH A 25 7.486 14.420 19.508 1.00 0.00 H -HETATM 75 H2 HOH A 25 8.845 15.029 19.235 1.00 0.00 H -HETATM 76 O HOH A 26 -6.970 -3.472 -2.029 1.00 0.00 O -HETATM 77 H1 HOH A 26 -6.238 -3.524 -1.415 1.00 0.00 H -HETATM 78 H2 HOH A 26 -7.742 -3.675 -1.501 1.00 0.00 H -HETATM 79 O HOH A 27 13.296 -2.617 16.716 1.00 0.00 O -HETATM 80 H1 HOH A 27 12.610 -1.950 16.751 1.00 0.00 H -HETATM 81 H2 HOH A 27 12.919 -3.373 17.167 1.00 0.00 H -HETATM 82 O HOH A 28 15.916 2.533 -0.162 1.00 0.00 O -HETATM 83 H1 HOH A 28 16.037 3.268 -0.764 1.00 0.00 H -HETATM 84 H2 HOH A 28 16.797 2.338 0.158 1.00 0.00 H -HETATM 85 O HOH A 29 -4.497 -8.607 18.970 1.00 0.00 O -HETATM 86 H1 HOH A 29 -4.575 -8.585 18.017 1.00 0.00 H -HETATM 87 H2 HOH A 29 -4.856 -9.458 19.221 1.00 0.00 H -HETATM 88 O HOH A 30 15.800 -3.698 1.916 1.00 0.00 O -HETATM 89 H1 HOH A 30 15.705 -4.057 2.798 1.00 0.00 H -HETATM 90 H2 HOH A 30 14.999 -3.194 1.774 1.00 0.00 H -HETATM 91 O HOH A 31 1.975 6.832 16.155 1.00 0.00 O -HETATM 92 H1 HOH A 31 2.458 7.492 16.652 1.00 0.00 H -HETATM 93 H2 HOH A 31 1.685 6.200 16.813 1.00 0.00 H -HETATM 94 O HOH A 32 7.805 14.464 8.872 1.00 0.00 O -HETATM 95 H1 HOH A 32 8.282 13.915 9.494 1.00 0.00 H -HETATM 96 H2 HOH A 32 8.466 15.065 8.526 1.00 0.00 H -HETATM 97 O HOH A 33 6.777 6.776 14.262 1.00 0.00 O -HETATM 98 H1 HOH A 33 7.351 7.133 14.939 1.00 0.00 H -HETATM 99 H2 HOH A 33 6.227 7.514 13.999 1.00 0.00 H -HETATM 100 O HOH A 34 -16.953 2.213 12.391 1.00 0.00 O -HETATM 101 H1 HOH A 34 -16.285 2.431 11.741 1.00 0.00 H -HETATM 102 H2 HOH A 34 -17.783 2.411 11.958 1.00 0.00 H -HETATM 103 O HOH A 35 11.008 -7.328 1.082 1.00 0.00 O -HETATM 104 H1 HOH A 35 10.465 -7.475 0.307 1.00 0.00 H -HETATM 105 H2 HOH A 35 11.872 -7.659 0.835 1.00 0.00 H -HETATM 106 O HOH A 36 6.425 2.400 20.626 1.00 0.00 O -HETATM 107 H1 HOH A 36 6.948 2.790 21.327 1.00 0.00 H -HETATM 108 H2 HOH A 36 6.359 3.089 19.965 1.00 0.00 H -HETATM 109 O HOH A 37 6.614 -13.799 12.406 1.00 0.00 O -HETATM 110 H1 HOH A 37 6.252 -14.293 11.670 1.00 0.00 H -HETATM 111 H2 HOH A 37 6.209 -14.191 13.180 1.00 0.00 H -HETATM 112 O HOH A 38 1.976 5.004 -0.809 1.00 0.00 O -HETATM 113 H1 HOH A 38 2.932 5.041 -0.833 1.00 0.00 H -HETATM 114 H2 HOH A 38 1.733 5.555 -0.065 1.00 0.00 H -HETATM 115 O HOH A 39 3.405 16.849 0.339 1.00 0.00 O -HETATM 116 H1 HOH A 39 4.153 16.280 0.157 1.00 0.00 H -HETATM 117 H2 HOH A 39 3.661 17.341 1.119 1.00 0.00 H -HETATM 118 O HOH A 40 5.434 1.385 9.011 1.00 0.00 O -HETATM 119 H1 HOH A 40 6.124 0.854 8.615 1.00 0.00 H -HETATM 120 H2 HOH A 40 4.925 0.766 9.534 1.00 0.00 H -HETATM 121 O HOH A 41 2.826 0.799 4.975 1.00 0.00 O -HETATM 122 H1 HOH A 41 3.476 0.437 4.373 1.00 0.00 H -HETATM 123 H2 HOH A 41 1.986 0.646 4.542 1.00 0.00 H -HETATM 124 O HOH A 42 13.322 12.726 5.604 1.00 0.00 O -HETATM 125 H1 HOH A 42 12.401 12.573 5.817 1.00 0.00 H -HETATM 126 H2 HOH A 42 13.329 13.576 5.163 1.00 0.00 H -HETATM 127 O HOH A 43 4.439 -5.334 15.340 1.00 0.00 O -HETATM 128 H1 HOH A 43 4.845 -6.013 15.879 1.00 0.00 H -HETATM 129 H2 HOH A 43 4.398 -4.567 15.911 1.00 0.00 H -HETATM 130 O HOH A 44 20.257 7.893 11.312 1.00 0.00 O -HETATM 131 H1 HOH A 44 19.642 7.417 10.754 1.00 0.00 H -HETATM 132 H2 HOH A 44 21.047 7.980 10.779 1.00 0.00 H -HETATM 133 O HOH A 45 -1.071 -3.134 -0.958 1.00 0.00 O -HETATM 134 H1 HOH A 45 -1.287 -3.078 -0.027 1.00 0.00 H -HETATM 135 H2 HOH A 45 -1.549 -2.407 -1.358 1.00 0.00 H -HETATM 136 O HOH A 46 13.832 10.476 -10.855 1.00 0.00 O -HETATM 137 H1 HOH A 46 13.722 11.301 -10.382 1.00 0.00 H -HETATM 138 H2 HOH A 46 12.942 10.218 -11.098 1.00 0.00 H -HETATM 139 O HOH A 47 9.714 4.323 5.965 1.00 0.00 O -HETATM 140 H1 HOH A 47 10.495 4.214 6.507 1.00 0.00 H -HETATM 141 H2 HOH A 47 9.095 4.790 6.527 1.00 0.00 H -HETATM 142 O HOH A 48 2.373 9.946 11.562 1.00 0.00 O -HETATM 143 H1 HOH A 48 1.977 9.908 12.432 1.00 0.00 H -HETATM 144 H2 HOH A 48 3.315 9.890 11.724 1.00 0.00 H -HETATM 145 O HOH A 49 11.806 4.860 -7.002 1.00 0.00 O -HETATM 146 H1 HOH A 49 12.683 4.755 -7.372 1.00 0.00 H -HETATM 147 H2 HOH A 49 11.808 5.742 -6.629 1.00 0.00 H -HETATM 148 O HOH A 50 -9.524 9.372 6.295 1.00 0.00 O -HETATM 149 H1 HOH A 50 -8.643 9.745 6.268 1.00 0.00 H -HETATM 150 H2 HOH A 50 -10.022 9.973 6.849 1.00 0.00 H -HETATM 151 O HOH A 51 2.216 3.896 19.122 1.00 0.00 O -HETATM 152 H1 HOH A 51 2.954 4.432 18.832 1.00 0.00 H -HETATM 153 H2 HOH A 51 2.586 3.320 19.791 1.00 0.00 H -HETATM 154 O HOH A 52 0.249 8.004 -2.308 1.00 0.00 O -HETATM 155 H1 HOH A 52 -0.409 7.602 -1.740 1.00 0.00 H -HETATM 156 H2 HOH A 52 0.912 8.341 -1.705 1.00 0.00 H -HETATM 157 O HOH A 53 9.905 9.349 -4.191 1.00 0.00 O -HETATM 158 H1 HOH A 53 10.158 9.954 -3.494 1.00 0.00 H -HETATM 159 H2 HOH A 53 10.679 9.291 -4.751 1.00 0.00 H -HETATM 160 O HOH A 54 12.349 -9.002 -3.328 1.00 0.00 O -HETATM 161 H1 HOH A 54 12.337 -9.688 -3.995 1.00 0.00 H -HETATM 162 H2 HOH A 54 12.614 -9.453 -2.526 1.00 0.00 H -HETATM 163 O HOH A 55 8.229 5.980 11.147 1.00 0.00 O -HETATM 164 H1 HOH A 55 7.547 6.227 11.771 1.00 0.00 H -HETATM 165 H2 HOH A 55 8.485 5.096 11.409 1.00 0.00 H -HETATM 166 O HOH A 56 1.830 24.624 14.389 1.00 0.00 O -HETATM 167 H1 HOH A 56 2.714 24.536 14.745 1.00 0.00 H -HETATM 168 H2 HOH A 56 1.353 25.123 15.052 1.00 0.00 H -HETATM 169 O HOH A 57 13.716 -8.318 -14.320 1.00 0.00 O -HETATM 170 H1 HOH A 57 14.283 -9.039 -14.047 1.00 0.00 H -HETATM 171 H2 HOH A 57 14.026 -7.565 -13.816 1.00 0.00 H -HETATM 172 O HOH A 58 16.484 12.728 -1.408 1.00 0.00 O -HETATM 173 H1 HOH A 58 16.704 11.908 -1.850 1.00 0.00 H -HETATM 174 H2 HOH A 58 15.577 12.611 -1.124 1.00 0.00 H -HETATM 175 O HOH A 59 18.162 -2.144 1.313 1.00 0.00 O -HETATM 176 H1 HOH A 59 17.626 -2.833 1.704 1.00 0.00 H -HETATM 177 H2 HOH A 59 17.624 -1.795 0.602 1.00 0.00 H -HETATM 178 O HOH A 60 -20.136 -10.782 -0.350 1.00 0.00 O -HETATM 179 H1 HOH A 60 -19.227 -10.717 -0.640 1.00 0.00 H -HETATM 180 H2 HOH A 60 -20.541 -9.966 -0.645 1.00 0.00 H -HETATM 181 O HOH A 61 10.496 -4.424 16.191 1.00 0.00 O -HETATM 182 H1 HOH A 61 10.512 -5.379 16.260 1.00 0.00 H -HETATM 183 H2 HOH A 61 10.457 -4.118 17.097 1.00 0.00 H -HETATM 184 O HOH A 62 -11.781 -0.014 -2.054 1.00 0.00 O -HETATM 185 H1 HOH A 62 -12.375 -0.680 -1.706 1.00 0.00 H -HETATM 186 H2 HOH A 62 -12.049 0.795 -1.619 1.00 0.00 H -HETATM 187 O HOH A 63 12.582 -7.233 7.944 1.00 0.00 O -HETATM 188 H1 HOH A 63 13.229 -7.063 7.260 1.00 0.00 H -HETATM 189 H2 HOH A 63 13.053 -7.081 8.763 1.00 0.00 H -HETATM 190 O HOH A 64 19.695 5.023 5.839 1.00 0.00 O -HETATM 191 H1 HOH A 64 19.729 4.067 5.864 1.00 0.00 H -HETATM 192 H2 HOH A 64 20.094 5.298 6.665 1.00 0.00 H -HETATM 193 O HOH A 65 -9.324 -14.552 30.065 1.00 0.00 O -HETATM 194 H1 HOH A 65 -8.845 -14.295 30.853 1.00 0.00 H -HETATM 195 H2 HOH A 65 -9.237 -15.505 30.032 1.00 0.00 H -HETATM 196 O HOH A 66 8.231 10.046 -7.430 1.00 0.00 O -HETATM 197 H1 HOH A 66 8.725 9.488 -8.030 1.00 0.00 H -HETATM 198 H2 HOH A 66 8.800 10.140 -6.666 1.00 0.00 H -HETATM 199 O HOH A 67 9.595 -13.755 -7.088 1.00 0.00 O -HETATM 200 H1 HOH A 67 10.453 -13.705 -6.666 1.00 0.00 H -HETATM 201 H2 HOH A 67 9.188 -12.908 -6.905 1.00 0.00 H -HETATM 202 O HOH A 68 8.612 -10.923 17.156 1.00 0.00 O -HETATM 203 H1 HOH A 68 9.083 -11.635 17.591 1.00 0.00 H -HETATM 204 H2 HOH A 68 8.852 -11.006 16.233 1.00 0.00 H -HETATM 205 O HOH A 69 -7.532 3.497 7.975 1.00 0.00 O -HETATM 206 H1 HOH A 69 -8.137 4.240 7.976 1.00 0.00 H -HETATM 207 H2 HOH A 69 -7.957 2.841 8.528 1.00 0.00 H -HETATM 208 O HOH A 70 -4.055 -3.943 4.002 1.00 0.00 O -HETATM 209 H1 HOH A 70 -4.244 -3.272 4.658 1.00 0.00 H -HETATM 210 H2 HOH A 70 -4.272 -4.769 4.435 1.00 0.00 H -HETATM 211 O HOH A 71 -11.495 -12.524 -8.203 1.00 0.00 O -HETATM 212 H1 HOH A 71 -10.752 -12.731 -7.635 1.00 0.00 H -HETATM 213 H2 HOH A 71 -11.530 -13.249 -8.826 1.00 0.00 H -HETATM 214 O HOH A 72 -13.926 -4.467 7.331 1.00 0.00 O -HETATM 215 H1 HOH A 72 -13.433 -4.958 7.989 1.00 0.00 H -HETATM 216 H2 HOH A 72 -14.067 -3.608 7.728 1.00 0.00 H -HETATM 217 O HOH A 73 4.111 -0.660 10.395 1.00 0.00 O -HETATM 218 H1 HOH A 73 3.838 -0.336 11.254 1.00 0.00 H -HETATM 219 H2 HOH A 73 4.594 -1.464 10.585 1.00 0.00 H -HETATM 220 O HOH A 74 11.050 -11.458 10.976 1.00 0.00 O -HETATM 221 H1 HOH A 74 10.952 -11.124 10.084 1.00 0.00 H -HETATM 222 H2 HOH A 74 10.167 -11.420 11.344 1.00 0.00 H -HETATM 223 O HOH A 75 16.383 23.414 -5.373 1.00 0.00 O -HETATM 224 H1 HOH A 75 15.492 23.383 -5.025 1.00 0.00 H -HETATM 225 H2 HOH A 75 16.882 23.894 -4.712 1.00 0.00 H -HETATM 226 O HOH A 76 10.435 -2.125 6.035 1.00 0.00 O -HETATM 227 H1 HOH A 76 10.597 -2.493 6.903 1.00 0.00 H -HETATM 228 H2 HOH A 76 9.486 -2.188 5.920 1.00 0.00 H -HETATM 229 O HOH A 77 -4.204 -3.331 8.665 1.00 0.00 O -HETATM 230 H1 HOH A 77 -3.357 -2.909 8.808 1.00 0.00 H -HETATM 231 H2 HOH A 77 -4.745 -3.038 9.399 1.00 0.00 H -HETATM 232 O HOH A 78 -2.993 2.186 8.580 1.00 0.00 O -HETATM 233 H1 HOH A 78 -2.322 2.040 9.247 1.00 0.00 H -HETATM 234 H2 HOH A 78 -2.806 3.060 8.238 1.00 0.00 H -HETATM 235 O HOH A 79 7.079 -7.067 9.094 1.00 0.00 O -HETATM 236 H1 HOH A 79 7.907 -7.369 9.466 1.00 0.00 H -HETATM 237 H2 HOH A 79 7.247 -6.159 8.840 1.00 0.00 H -HETATM 238 O HOH A 80 -20.839 -2.398 10.543 1.00 0.00 O -HETATM 239 H1 HOH A 80 -20.441 -1.731 11.103 1.00 0.00 H -HETATM 240 H2 HOH A 80 -21.253 -3.008 11.153 1.00 0.00 H -HETATM 241 O HOH A 81 -10.638 -3.746 8.081 1.00 0.00 O -HETATM 242 H1 HOH A 81 -10.974 -2.886 7.831 1.00 0.00 H -HETATM 243 H2 HOH A 81 -10.333 -3.633 8.981 1.00 0.00 H -HETATM 244 O HOH A 82 3.115 -1.197 22.774 1.00 0.00 O -HETATM 245 H1 HOH A 82 2.612 -0.681 22.144 1.00 0.00 H -HETATM 246 H2 HOH A 82 3.128 -0.661 23.567 1.00 0.00 H -HETATM 247 O HOH A 83 0.483 -10.006 -3.347 1.00 0.00 O -HETATM 248 H1 HOH A 83 0.435 -9.084 -3.603 1.00 0.00 H -HETATM 249 H2 HOH A 83 0.972 -10.001 -2.524 1.00 0.00 H -HETATM 250 O HOH A 84 2.295 11.437 4.504 1.00 0.00 O -HETATM 251 H1 HOH A 84 2.283 12.392 4.558 1.00 0.00 H -HETATM 252 H2 HOH A 84 1.672 11.151 5.172 1.00 0.00 H -HETATM 253 O HOH A 85 -4.207 8.427 -9.157 1.00 0.00 O -HETATM 254 H1 HOH A 85 -3.626 8.061 -8.490 1.00 0.00 H -HETATM 255 H2 HOH A 85 -4.139 7.819 -9.894 1.00 0.00 H -HETATM 256 O HOH A 86 -1.748 1.178 14.802 1.00 0.00 O -HETATM 257 H1 HOH A 86 -0.832 1.286 15.057 1.00 0.00 H -HETATM 258 H2 HOH A 86 -1.786 1.501 13.902 1.00 0.00 H -HETATM 259 O HOH A 87 11.161 10.769 -1.652 1.00 0.00 O -HETATM 260 H1 HOH A 87 12.005 11.206 -1.761 1.00 0.00 H -HETATM 261 H2 HOH A 87 10.941 10.898 -0.730 1.00 0.00 H -HETATM 262 O HOH A 88 -2.499 -1.069 28.029 1.00 0.00 O -HETATM 263 H1 HOH A 88 -2.134 -0.249 28.360 1.00 0.00 H -HETATM 264 H2 HOH A 88 -3.274 -0.804 27.532 1.00 0.00 H -HETATM 265 O HOH A 89 0.946 12.602 9.641 1.00 0.00 O -HETATM 266 H1 HOH A 89 1.165 12.957 10.503 1.00 0.00 H -HETATM 267 H2 HOH A 89 1.791 12.480 9.210 1.00 0.00 H -HETATM 268 O HOH A 90 -13.774 -9.027 7.241 1.00 0.00 O -HETATM 269 H1 HOH A 90 -12.944 -8.814 6.813 1.00 0.00 H -HETATM 270 H2 HOH A 90 -14.257 -8.201 7.252 1.00 0.00 H -HETATM 271 O HOH A 91 -2.326 4.247 -1.037 1.00 0.00 O -HETATM 272 H1 HOH A 91 -1.729 4.090 -0.305 1.00 0.00 H -HETATM 273 H2 HOH A 91 -2.313 3.431 -1.537 1.00 0.00 H -HETATM 274 O HOH A 92 11.193 -15.303 16.586 1.00 0.00 O -HETATM 275 H1 HOH A 92 11.614 -14.724 17.222 1.00 0.00 H -HETATM 276 H2 HOH A 92 11.435 -14.940 15.734 1.00 0.00 H -HETATM 277 O HOH A 93 -2.622 1.692 3.454 1.00 0.00 O -HETATM 278 H1 HOH A 93 -1.965 2.388 3.469 1.00 0.00 H -HETATM 279 H2 HOH A 93 -2.563 1.287 4.319 1.00 0.00 H -HETATM 280 O HOH A 94 7.174 -2.283 6.930 1.00 0.00 O -HETATM 281 H1 HOH A 94 7.323 -1.811 7.750 1.00 0.00 H -HETATM 282 H2 HOH A 94 7.434 -3.184 7.121 1.00 0.00 H -HETATM 283 O HOH A 95 -0.842 -11.618 9.899 1.00 0.00 O -HETATM 284 H1 HOH A 95 -0.578 -11.004 10.584 1.00 0.00 H -HETATM 285 H2 HOH A 95 -0.031 -11.822 9.433 1.00 0.00 H -HETATM 286 O HOH A 96 4.895 -4.806 12.568 1.00 0.00 O -HETATM 287 H1 HOH A 96 5.047 -5.668 12.179 1.00 0.00 H -HETATM 288 H2 HOH A 96 5.067 -4.931 13.501 1.00 0.00 H -HETATM 289 O HOH A 97 -8.783 5.023 2.078 1.00 0.00 O -HETATM 290 H1 HOH A 97 -7.930 4.592 2.018 1.00 0.00 H -HETATM 291 H2 HOH A 97 -9.415 4.304 2.090 1.00 0.00 H -HETATM 292 O HOH A 98 2.555 8.864 2.910 1.00 0.00 O -HETATM 293 H1 HOH A 98 2.682 9.808 3.007 1.00 0.00 H -HETATM 294 H2 HOH A 98 3.101 8.477 3.594 1.00 0.00 H -HETATM 295 O HOH A 99 -5.009 0.010 11.782 1.00 0.00 O -HETATM 296 H1 HOH A 99 -4.976 0.635 11.058 1.00 0.00 H -HETATM 297 H2 HOH A 99 -5.278 0.532 12.538 1.00 0.00 H -HETATM 298 O HOH A 100 5.344 5.771 23.464 1.00 0.00 O -HETATM 299 H1 HOH A 100 4.541 6.000 23.933 1.00 0.00 H -HETATM 300 H2 HOH A 100 5.994 6.398 23.781 1.00 0.00 H -HETATM 301 O HOH A 101 -9.041 -0.641 -9.802 1.00 0.00 O -HETATM 302 H1 HOH A 101 -9.238 0.049 -9.169 1.00 0.00 H -HETATM 303 H2 HOH A 101 -8.681 -1.354 -9.275 1.00 0.00 H -HETATM 304 O HOH A 102 -9.917 -10.440 -1.049 1.00 0.00 O -HETATM 305 H1 HOH A 102 -9.246 -9.761 -0.978 1.00 0.00 H -HETATM 306 H2 HOH A 102 -9.792 -10.810 -1.923 1.00 0.00 H -TER 307 HOH A 102 -END diff --git a/guardowl/tests/stability_test_alanine_dipeptide.yaml b/guardowl/tests/stability_test_alanine_dipeptide.yaml index 0212fa8..51e38fa 100644 --- a/guardowl/tests/stability_test_alanine_dipeptide.yaml +++ b/guardowl/tests/stability_test_alanine_dipeptide.yaml @@ -1,10 +1,15 @@ # config.yaml +potentials: + - provider: "openmm-ml" + model_name: "ani2x" + implementation: "nnpops" + + tests: - - protocol: "alanine_dipeptide_protocol" + - protocol: "alanine_dipeptide_test" env: "vacuum" ensemble: "npt" nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 5 temperature: 300 diff --git a/guardowl/tests/stability_test_hipen.yaml b/guardowl/tests/stability_test_hipen.yaml deleted file mode 100644 index e6eebcb..0000000 --- a/guardowl/tests/stability_test_hipen.yaml +++ /dev/null @@ -1,8 +0,0 @@ -# config.yaml -tests: - - protocol: "hipen_protocol" - hipen_idx: [0,1] - nnp: "ani2x" - implementation: "torchani" - temperature: 300 - nr_of_simulation_steps: 5 diff --git a/guardowl/tests/stability_test_pure_liquid.yaml b/guardowl/tests/stability_test_pure_liquid.yaml index 780284e..0c6f05f 100644 --- a/guardowl/tests/stability_test_pure_liquid.yaml +++ b/guardowl/tests/stability_test_pure_liquid.yaml @@ -1,11 +1,15 @@ # config.yaml +potentials: + - provider: "openmm-ml" + model_name: "ani2x" + implementation: "nnpops" + + tests: - - protocol: "pure_liquid_protocol" + - protocol: "organic_liquid_test" molecule_name: ["ethane", "butane"] nr_of_molecule: [10, 20] ensemble: "npt" - nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 5 nr_of_equilibration_steps: 5 diff --git a/guardowl/tests/stability_test_small_molecule.yaml b/guardowl/tests/stability_test_small_molecule.yaml new file mode 100644 index 0000000..87c43e4 --- /dev/null +++ b/guardowl/tests/stability_test_small_molecule.yaml @@ -0,0 +1,15 @@ +potentials: + - provider: "openmm-ml" + model_name: "ani2x" + implementation: "nnpops" + +tests: + - protocol: "small_molecule_test" + smiles: [ + 'CCOc1ccc2nc(/N=C\c3ccccc3O)sc2c1', # NOTE: we are quoting literally unsing ' instead of " + "Cn1cc(Cl)c(/C=N/O)n1", + "S=c1cc(-c2ccc(Cl)cc2)ss1", + ] + names: ["hp1", "hp2", "hp3"] + temperature: [300, 400, 500] + nr_of_simulation_steps: 500 diff --git a/guardowl/tests/stability_test_waterbox.yaml b/guardowl/tests/stability_test_waterbox.yaml index f2cf4fe..ee7f822 100644 --- a/guardowl/tests/stability_test_waterbox.yaml +++ b/guardowl/tests/stability_test_waterbox.yaml @@ -1,10 +1,13 @@ # config.yaml +potentials: + - provider: "openmm-ml" + model_name: "ani2x" + implementation: "nnpops" + tests: - - protocol: "waterbox_protocol" + - protocol: "waterbox_test" edge_length: 5 ensemble: "npt" - nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 5 temperature: 300 diff --git a/guardowl/tests/test_analysis.py b/guardowl/tests/test_analysis.py index bf48d4b..c3015e1 100644 --- a/guardowl/tests/test_analysis.py +++ b/guardowl/tests/test_analysis.py @@ -5,24 +5,24 @@ def generate_water_mdtraj_instance() -> md.Trajectory: system_name = "waterbox" - prefix_path = f"{prefix}/{system_name}/" ensemble = "npt" - nnp = "ani2x" - implementation = "torchani" + nnp = "ani2x_nnpops" + prefix_path = f"{prefix}/{system_name}" + + traj_file = f"{prefix_path}/{system_name}_15A_{nnp}_{ensemble}_300K_300.dcd" + top_file = f"{prefix_path}/{system_name}_15A_{nnp}_{ensemble}_300K_300.pdb" - traj_file = f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}.dcd" - top_file = f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}.pdb" return md.load(traj_file, top=top_file) def get_water_csv_file(): system_name = "waterbox" - prefix_path = f"{prefix}/{system_name}/" + prefix_path = f"{prefix}/{system_name}" ensemble = "npt" - nnp = "ani2x" - implementation = "torchani" + nnp = "ani2x_nnpops" + + csv_file = f"{prefix_path}/{system_name}_15A_{nnp}_{ensemble}_300K_300.csv" - csv_file = f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}.csv" return csv_file @@ -35,7 +35,6 @@ def test_rdf(): assert len(md_traj_instance.top.select("water")) > 0 rdf = property_calculator.calculate_water_rdf() - print(rdf) def test_calculate_properties(): @@ -52,4 +51,3 @@ def test_calculate_properties(): property_calculator = PropertyCalculator(md_traj_instance) property_calculator.calculate_heat_capacity(total_energy, volumn) property_calculator.calculate_isothermal_compressability_kappa_T() - diff --git a/guardowl/tests/test_benchmark.py b/guardowl/tests/test_benchmark.py index 3c49428..8095d0e 100644 --- a/guardowl/tests/test_benchmark.py +++ b/guardowl/tests/test_benchmark.py @@ -22,7 +22,7 @@ # @pytest.mark.parametrize( -# "nnp, implementation", [("ani2x", "nnpops"), ("ani2x", "torchani")] +# "nnp, [("ani2x"), ("ani2x", "torchani")] # ) # def test_run_benchmark_for_waterbox(nnp: str, implementation: str) -> None: # ######################################## diff --git a/guardowl/tests/test_script_execution.py b/guardowl/tests/test_script_execution.py index d35c41b..f96041c 100644 --- a/guardowl/tests/test_script_execution.py +++ b/guardowl/tests/test_script_execution.py @@ -4,7 +4,7 @@ import os TEST_TO_PERFORM = [ - "guardowl/tests/stability_test_hipen.yaml", + "guardowl/tests/stability_test_small_molecule.yaml", "guardowl/tests/stability_test_waterbox.yaml", "guardowl/tests/stability_test_alanine_dipeptide.yaml", "guardowl/tests/stability_test_pure_liquid.yaml", diff --git a/guardowl/tests/test_simulation.py b/guardowl/tests/test_simulation.py index d7696fb..48f60bc 100644 --- a/guardowl/tests/test_simulation.py +++ b/guardowl/tests/test_simulation.py @@ -1,23 +1,20 @@ from typing import Literal, Tuple + import numpy as np -from openmm.openmm import System import pytest +from guardowl.setup import PotentialFactory +from guardowl.simulation import SimulationFactory, SystemFactory +from guardowl.utils import get_available_nnps from openmm import unit from openmm.app import DCDReporter, PDBFile -from openmmml import MLPotential from openmmtools.utils import get_fastest_platform -from guardowl.simulation import SimulationFactory, SystemFactory -from guardowl.utils import ( - get_available_nnps_and_implementation, - gpu_memory_constrained_nnps_and_implementation, -) +from typing import Dict, Tuple -@pytest.mark.parametrize("nnp, e_ref", [("ani2x", -2346020.730264931)]) +@pytest.mark.parametrize("params", get_available_nnps()) def test_generate_simulation_instance( - nnp: str, - e_ref: float, + params: Dict[str, Tuple[str, int, float]], single_hipen_system: PDBFile, ) -> None: """Test if we can generate a simulation instance""" @@ -25,7 +22,7 @@ def test_generate_simulation_instance( # set up system and topology and define ml region pdb = single_hipen_system platform = get_fastest_platform() - nnp = MLPotential(nnp) + nnp = PotentialFactory().initialize_potential(params) ######################################################## ######################################################## # create ML simulation @@ -41,28 +38,35 @@ def test_generate_simulation_instance( temperature=unit.Quantity(300, unit.kelvin), ) sim.context.setPositions(pdb.positions) - e = ( + e_init = ( sim.context.getState(getEnergy=True) .getPotentialEnergy() .value_in_unit(unit.kilojoule_per_mole) ) - assert np.isclose(e, e_ref) # test minimization - sim.minimizeEnergy(maxIterations=1000) + sim.minimizeEnergy(maxIterations=50) pos = sim.context.getState(getPositions=True).getPositions() + e_final = ( + sim.context.getState(getEnergy=True) + .getPotentialEnergy() + .value_in_unit(unit.kilojoule_per_mole) + ) + assert e_init > e_final + +from typing import Any, Dict -@pytest.mark.parametrize("nnp, implementation", get_available_nnps_and_implementation()) + +@pytest.mark.parametrize("params", get_available_nnps()) def test_simulating( - nnp: str, - implementation: str, + params: Dict[str, Tuple[str, int, float]], single_hipen_system: PDBFile, ) -> None: """Test if we can run a simulation for a number of steps""" # set up system and topology and define ml region pdb = single_hipen_system - qml = MLPotential(nnp) + nnp = PotentialFactory().initialize_potential(params) platform = get_fastest_platform() ######################################################## @@ -70,9 +74,8 @@ def test_simulating( # generate pure ML simulation sim = SimulationFactory.create_simulation( SystemFactory().initialize_system( - qml, + nnp, pdb.topology, - implementation=implementation, ), pdb.topology, env="vacuum", @@ -88,20 +91,17 @@ def test_simulating( del sim -@pytest.mark.parametrize( - "nnp, implementation", gpu_memory_constrained_nnps_and_implementation -) +@pytest.mark.parametrize("params", get_available_nnps()) def test_pure_liquid_simulation( - nnp: tuple[Literal["ani2x"], Literal["torchani"]], - implementation: tuple[Literal["ani2x"], Literal["torchani"]], + params: Dict[str, Tuple[str, int, float]], ): - from guardowl.testsystems import TestsystemFactory, LiquidOption + from guardowl.testsystems import LiquidOption, TestsystemFactory opt = LiquidOption(name="ethane", nr_of_copies=150) factory = TestsystemFactory() liquid_box = factory.generate_testsystem(opt) - nnp = MLPotential(nnp) + nnp = PotentialFactory().initialize_potential(params) platform = get_fastest_platform() ######################################################## # ---------------------------# @@ -110,7 +110,6 @@ def test_pure_liquid_simulation( SystemFactory().initialize_system( nnp, liquid_box.topology, - implementation=implementation, ), liquid_box.topology, env="solution", diff --git a/guardowl/tests/test_stability_protocol.py b/guardowl/tests/test_stability_protocol.py index b2c9147..0571af3 100644 --- a/guardowl/tests/test_stability_protocol.py +++ b/guardowl/tests/test_stability_protocol.py @@ -14,18 +14,19 @@ SmallMoleculeVacuumOption, TestsystemFactory, ) -from guardowl.utils import ( - get_available_nnps_and_implementation, - gpu_memory_constrained_nnps_and_implementation, -) +from guardowl.utils import get_available_nnps from openmm import unit from openmm.app import StateDataReporter from openmmml import MLPotential from openmmtools.utils import get_fastest_platform +from guardowl.setup import PotentialFactory +from typing import Dict, Tuple -@pytest.mark.parametrize("nnp, implementation", get_available_nnps_and_implementation()) -def test_setup_vacuum_protocol_individual_parts(nnp: str, implementation: str) -> None: +@pytest.mark.parametrize("params", get_available_nnps()) +def test_setup_vacuum_protocol_individual_parts( + params: Dict[str, Tuple[str, int, float]] +) -> None: """Test if we can run a simulation for a number of steps""" # ---------------------------# @@ -36,15 +37,14 @@ def test_setup_vacuum_protocol_individual_parts(nnp: str, implementation: str) - ) testsystem = TestsystemFactory().generate_testsystem(opt) - nnp_instance = MLPotential(nnp) + nnp_instance = PotentialFactory().initialize_potential(params) system = SystemFactory().initialize_system( nnp_instance, testsystem.topology, - implementation=implementation, ) output_folder = "test_stability_protocol" - log_file_name = f"vacuum_{name}_{nnp}_{implementation}" + log_file_name = f"vacuum_{name}" Path(output_folder).mkdir(parents=True, exist_ok=True) stability_test = MultiTemperatureProtocol() @@ -76,9 +76,9 @@ def test_setup_vacuum_protocol_individual_parts(nnp: str, implementation: str) - stability_test.perform_stability_test(params) -@pytest.mark.parametrize("nnp, implementation", get_available_nnps_and_implementation()) -def test_run_vacuum_protocol(nnp: str, implementation: str) -> None: - from guardowl.protocols import run_hipen_protocol +@pytest.mark.parametrize("params", get_available_nnps()) +def test_run_vacuum_protocol(params: Dict[str, Tuple[str, int, float]]) -> None: + from guardowl.protocols import run_small_molecule_test reporter = StateDataReporter( file=None, # it is necessary to set this to None since it otherwise can't be passed to mp @@ -93,23 +93,25 @@ def test_run_vacuum_protocol(nnp: str, implementation: str) -> None: ) platform = get_fastest_platform() output_folder = "test_stability_protocol" + nnp_instance = PotentialFactory().initialize_potential(params) - run_hipen_protocol( - 1, - nnp, - implementation, - 300, - reporter, - platform, - output_folder, + run_small_molecule_test( + smiles="CCOc1ccc2nc(/N=C\c3ccccc3O)sc2c1", + names=["ZINC00061095"], + nnp=nnp_instance, + nnp_name=params["model_name"], + temperature=300, + reporter=reporter, + platform=platform, + output_folder=output_folder, nr_of_simulation_steps=2, ) @pytest.mark.parametrize("ensemble", ["NVE", "NVT", "NpT"]) -@pytest.mark.parametrize("nnp, implementation", get_available_nnps_and_implementation()) -def test_setup_waterbox_protocol_individual_parts( - ensemble: str, nnp: str, implementation: str, temperature: int = 300 +@pytest.mark.parametrize("params", get_available_nnps()) +def test_setup_waterbox_test_individual_parts( + ensemble: str, params: Dict[str, Tuple[str, int, float]], temperature: int = 300 ) -> None: """Test if we can run a simulation for a number of steps""" @@ -118,18 +120,15 @@ def test_setup_waterbox_protocol_individual_parts( edge_length = 5 opt = LiquidOption(name="water", edge_length=edge_length * unit.angstrom) testsystem = TestsystemFactory().generate_testsystem(opt) - nnp_instance = MLPotential(nnp) + nnp_instance = PotentialFactory().initialize_potential(params) system = SystemFactory().initialize_system( nnp_instance, testsystem.topology, - implementation=implementation, ) output_folder = "test_stability_protocol" - log_file_name = ( - f"waterbox_{edge_length}A_{nnp}_{implementation}_{ensemble}_{temperature}K" - ) + log_file_name = f"waterbox_{edge_length}A_{ensemble}_{temperature}K" Path(output_folder).mkdir(parents=True, exist_ok=True) stability_test = PropagationProtocol() @@ -165,10 +164,15 @@ def test_setup_waterbox_protocol_individual_parts( ) +from typing import Dict, Tuple + + @pytest.mark.parametrize("ensemble", ["NVE", "NVT", "NpT"]) -@pytest.mark.parametrize("nnp, implementation", get_available_nnps_and_implementation()) -def test_run_waterbox_protocol(ensemble: str, nnp: str, implementation: str) -> None: - from guardowl.protocols import run_waterbox_protocol +@pytest.mark.parametrize("params", get_available_nnps()) +def test_run_waterbox_test( + ensemble: str, params: Dict[str, Tuple[str, int, float]] +) -> None: + from guardowl.protocols import run_waterbox_test reporter = StateDataReporter( file=None, # it is necessary to set this to None since it otherwise can't be passed to mp @@ -183,31 +187,31 @@ def test_run_waterbox_protocol(ensemble: str, nnp: str, implementation: str) -> ) platform = get_fastest_platform() output_folder = "test_stability_protocol" - nnp = MLPotential(nnp) - - run_waterbox_protocol( - 5, - ensemble, - nnp, - implementation, - 300, - reporter, - platform, - output_folder, + nnp_instance = PotentialFactory().initialize_potential(params) + + run_waterbox_test( + edge_length=5, + ensemble=ensemble, + nnp=nnp_instance, + nnp_name=params["model_name"], + temperature=300, + reporter=reporter, + platform=platform, + output_folder=output_folder, nr_of_simulation_steps=2, nr_of_equilibrium_steps=10, ) -@pytest.mark.parametrize("environment", ["vacuum", "solution"]) -@pytest.mark.parametrize("ensemble", ["NVE", "NVT", "NpT"]) @pytest.mark.parametrize( - "nnp, implementation", gpu_memory_constrained_nnps_and_implementation -) -def test_run_alanine_dipeptide_protocol( - environment: str, ensemble: str, nnp: str, implementation: str + "environment", ["vacuum"] +) # FIXME currently disabled solution test as MACE model hits OOM error +@pytest.mark.parametrize("ensemble", ["NVE", "NVT", "NpT"]) +@pytest.mark.parametrize("params", get_available_nnps()) +def test_run_alanine_dipeptide_test( + environment: str, ensemble: str, params: Dict[str, Tuple[str, int, float]] ) -> None: - from guardowl.protocols import run_alanine_dipeptide_protocol + from guardowl.protocols import run_alanine_dipeptide_test reporter = StateDataReporter( file=None, # it is necessary to set this to None since it otherwise can't be passed to mp @@ -222,14 +226,14 @@ def test_run_alanine_dipeptide_protocol( ) platform = get_fastest_platform() output_folder = "test_stability_protocol" - nnp = MLPotential(nnp) - run_alanine_dipeptide_protocol( - nnp, - implementation, - 300, - reporter, - platform, - output_folder, + nnp_instance = PotentialFactory().initialize_potential(params) + run_alanine_dipeptide_test( + nnp=nnp_instance, + nnp_name=params["model_name"], + temperature=300, + reporter=reporter, + platform=platform, + output_folder=output_folder, ensemble=ensemble, nr_of_simulation_steps=2, env=environment, @@ -237,9 +241,11 @@ def test_run_alanine_dipeptide_protocol( @pytest.mark.parametrize("ensemble", ["NVE", "NVT", "NpT"]) -@pytest.mark.parametrize("nnp, implementation", get_available_nnps_and_implementation()) -def test_run_pure_liquid_protocol(ensemble: str, nnp: str, implementation: str) -> None: - from guardowl.protocols import run_pure_liquid_protocol +@pytest.mark.parametrize("params", get_available_nnps()) +def test_run_organic_liquid_test( + ensemble: str, params: Dict[str, Tuple[str, int, float]] +) -> None: + from guardowl.protocols import run_organic_liquid_test reporter = StateDataReporter( file=None, # it is necessary to set this to None since it otherwise can't be passed to mp @@ -255,11 +261,11 @@ def test_run_pure_liquid_protocol(ensemble: str, nnp: str, implementation: str) ) platform = get_fastest_platform() output_folder = "test_stability_protocol" - nnp = MLPotential(nnp) + nnp_instance = PotentialFactory().initialize_potential(params) - run_pure_liquid_protocol( - nnp=nnp, - implementation=implementation, + run_organic_liquid_test( + nnp=nnp_instance, + nnp_name=params["model_name"], temperature=300, reporter=reporter, platform=platform, @@ -272,8 +278,8 @@ def test_run_pure_liquid_protocol(ensemble: str, nnp: str, implementation: str) ) -@pytest.mark.parametrize("nnp, implementation", get_available_nnps_and_implementation()) -def test_DOF_protocol(nnp: str, implementation: str) -> None: +@pytest.mark.parametrize("params", get_available_nnps()) +def test_DOF_protocol(params: Dict[str, Tuple[str, int, float]]) -> None: """Test if we can run a simulation for a number of steps""" # ---------------------------# @@ -282,16 +288,15 @@ def test_DOF_protocol(nnp: str, implementation: str) -> None: opt = SmallMoleculeVacuumOption(name="ethanol") testsystem = TestsystemFactory().generate_testsystem(opt) - nnp_instance = MLPotential(nnp) + nnp_instance = PotentialFactory().initialize_potential(params) system = SystemFactory().initialize_system( nnp_instance, testsystem.topology, - implementation=implementation, ) output_folder = "test_stability_protocol" - log_file_name = f"vacuum_{opt.name}_{nnp}_{implementation}" + log_file_name = f"vacuum_{opt.name}" Path(output_folder).mkdir(parents=True, exist_ok=True) stability_test = BondProfileProtocol() @@ -364,18 +369,18 @@ def test_input_generation_for_minimization_tests(): reference_testsystem.positions = minimized_position -@pytest.mark.parametrize("nnp, implementation", get_available_nnps_and_implementation()) -def test_run_detect_minimum(nnp, implementation, tmp_dir): +@pytest.mark.parametrize("params", get_available_nnps()) +def test_run_detect_minimum(params: Dict[str, Tuple[str, int, float]], tmp_dir): from guardowl.protocols import run_detect_minimum platform = get_fastest_platform() - nnp_instance = MLPotential(nnp) + nnp_instance = PotentialFactory().initialize_potential(params) run_detect_minimum( - nnp_instance, - implementation, - platform, - tmp_dir, + nnp=nnp_instance, + nnp_name=params["model_name"], + platform=platform, + output_folder=tmp_dir, percentage=0.1, skip_molecules_above_heavy_atom_threshold=8, ) diff --git a/guardowl/tests/test_vis.py b/guardowl/tests/test_vis.py index 61b576e..9a69c34 100644 --- a/guardowl/tests/test_vis.py +++ b/guardowl/tests/test_vis.py @@ -4,7 +4,7 @@ def test_generate_visualization(): from guardowl.vis import MonitoringPlotter - prefix_path = f"{prefix}/ZINC00061095/" + prefix_path = f"{prefix}/ZINC00061095" s = MonitoringPlotter( f"{prefix_path}/vacuum_ZINC00061095_ani2x_nnpops_300.dcd", f"{prefix_path}/vacuum_ZINC00061095_ani2x_nnpops_300.pdb", @@ -17,7 +17,7 @@ def test_generate_visualization(): def test_visualize_DOF_scan(): from guardowl.vis import MonitoringPlotter - prefix_path = f"{prefix}/ethanol/" + prefix_path = f"{prefix}/ethanol" s = MonitoringPlotter( f"{prefix_path}/vacuum_ethanol_ani2x_nnpops.dcd", f"{prefix_path}/vacuum_ethanol_ani2x_nnpops.pdb", @@ -34,11 +34,12 @@ def test_waterbox(): prefix_path = f"{prefix}/{system_name}/" ensemble = "npt" nnp = "ani2x" - implementation = "torchani" + implementation = "nnpops" + s = MonitoringPlotter( - f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}.dcd", - f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}.pdb", - f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}.csv", + f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}_300K_300.dcd", + f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}_300K_300.pdb", + f"{prefix_path}/{system_name}_15A_{nnp}_{implementation}_{ensemble}_300K_300.csv", ) s.set_nglview(wrap=True, periodic=True) diff --git a/guardowl/testsystems.py b/guardowl/testsystems.py index 96d269c..2b9cdf4 100644 --- a/guardowl/testsystems.py +++ b/guardowl/testsystems.py @@ -32,6 +32,14 @@ class SmallMoleculeVacuumOption: smiles: str = "" path: str = "" + def __str__(self) -> str: + if self.name: + return self.name + elif self.smiles: + return self.smiles + else: + return self.path + @dataclass class SolvatedSystemOption: @@ -142,14 +150,14 @@ def _generate_small_molecule_testsystem( return _SmallMoleculeFactory().generate_testsystem_from_smiles( smiles=testsystem_option.smiles ) - elif testsystem_option.name: - return _SmallMoleculeFactory().generate_testsystems_from_name( - name=testsystem_option.name - ) elif testsystem_option.path: return _SmallMoleculeFactory().generate_testsystems_from_sdf( path=testsystem_option.path ) + elif testsystem_option.name: + return _SmallMoleculeFactory().generate_testsystems_from_name( + name=testsystem_option.name + ) else: raise RuntimeError("No valid input provided") diff --git a/guardowl/utils.py b/guardowl/utils.py index f157a86..f84d1b0 100644 --- a/guardowl/utils.py +++ b/guardowl/utils.py @@ -1,31 +1,36 @@ import os -from typing import Tuple, List, Optional, Dict, Iterator +from typing import Tuple, List, Dict, Iterator from loguru import logger as log -available_nnps_and_implementation = [ - ("ani2x", "nnpops"), - ("ani2x", "torchani"), -] +available_nnps = [0, 1] +gh_available_nnps = [1] -gh_available_nnps_and_implementation = [ - ("ani2x", "torchani"), -] +_IMPLEMENTED_ELEMENTS = [1, 6, 7, 8, 9, 16, 17] -gpu_memory_constrained_nnps_and_implementation = [ - ("ani2x", "torchani"), +potentials = [ + { + "provider": "physics-ml", + "model_name": "physicsml_model", + "precision": "64", + "position_scaling": 10.0, + "output_scaling": "4.184", + "device": "cuda", + "model_path": "guardowl/tests/data/physics-ml/mace", + }, + {"provider": "openmm-ml", "model_name": "ani2x"}, ] -_IMPLEMENTED_ELEMENTS = [1, 6, 7, 8, 9, 16, 17] - -def get_available_nnps_and_implementation() -> list: - """Return a list of available neural network potentials and implementations""" +def get_available_nnps() -> list: + """Return a list of available neural network potentials""" IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "true" if IN_GITHUB_ACTIONS: - return gh_available_nnps_and_implementation + return [ + potentials[i] for i in gh_available_nnps + ] # FIXME: this currently only includes the openmmml potentials else: - return available_nnps_and_implementation + return [potentials[i] for i in available_nnps] def get_data_filename(relative_path): @@ -57,7 +62,7 @@ def _logo(): ^...^ / o,o \ |):::(| - ====w=w=== + ====w=w==== """ return logo diff --git a/guardowl/vis.py b/guardowl/vis.py index 0067313..3807386 100644 --- a/guardowl/vis.py +++ b/guardowl/vis.py @@ -176,15 +176,37 @@ def generate_summary( if l == "water-rdf": axs[row][column].plot(*d, "o", alpha=0.5, markersize=2) axs[row][column].plot(*d, lw=2) - axs[row][column].set_xlabel("$r(nm)$") + axs[row][column].set_xlabel( + "$r(nm)$" + ) # FIXME: this currently does not plot the length, but the bins axs[row][column].set_ylabel("$g(r)$") axs[row][column].set_title("water-rdf") + + # extract experimental water rdf + exp_water_rdf_r, exp_water_rdf_den = ( + self.property_calculator.experimental_water_rdf() + ) + + # plot experimental water rdf + axs[row][column].plot( + exp_water_rdf_r, exp_water_rdf_den, lw=1.0, color="black" + ) + + # only plot up to maximum of NNP data + axs[row][column].set_xlim((0, max(*d[0]))) + elif l == "water-bond-length": - axs[row][column].hist(d.flatten() * 10) + axs[row][column].hist(d.flatten() * 10, bins=20) + if any(d.flatten() * 10 > 5.0): + log.warning( + f"Water bond larger than 5 Angstrom {max(d.flatten()*10):.2f} detected." + ) + axs[row][column].set_title("water O-H bond length") axs[row][column].set_xlabel("d [A]") + axs[row][column].set_xlim((0, 5)) elif l == "water-angle": - axs[row][column].hist(d.flatten()) + axs[row][column].hist(d.flatten(), bins=20) axs[row][column].set_title("water H-O-H angle") axs[row][column].set_xlabel("angle [degrees]") elif l == "bond deviation": diff --git a/scripts/alanine.yaml b/scripts/alanine.yaml index b8e6be0..1fdc2ec 100644 --- a/scripts/alanine.yaml +++ b/scripts/alanine.yaml @@ -1,10 +1,20 @@ # config.yaml +potentials: + - provider: "physics-ml" + model_name: "MACE" + precision: 64 + position_scaling: 10.0 + output_scaling: 4.184 * 627 + model_path: "/guardowl/tests/data/physics-ml/mace" + + - provider: "openmm-ml" + model_name: "ANI2x" + + tests: - - protocol: "perform_alanine_dipeptide_protocol" + - protocol: "perform_alanine_dipeptide_test" env: "solution" ensemble: "npt" - nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 500_000 temperature: 300 diff --git a/scripts/perform_benchmark.py b/scripts/perform_benchmark.py deleted file mode 100644 index b868a35..0000000 --- a/scripts/perform_benchmark.py +++ /dev/null @@ -1,128 +0,0 @@ -from collections import namedtuple -from dataclasses import dataclass -import logging -import fire -import matplotlib.pylab as plt -import numpy as np -import seaborn as sns -from openmmtools.testsystems import WaterCluster -from rich.progress import Progress - -log = logging.getLogger("rich") - - -def plot_timing(benchmark_results, title: str): - sns.set_style("whitegrid", {"grid.linestyle": "--"}) - # plot benchmark results - pal = iter(sns.color_palette("bright", 10)) - import matplotlib.ticker as ticker - - fig, ax1 = plt.subplots(figsize=(6, 3), dpi=300) - ax2 = ax1.twinx() - mention_reference_timing = True - - for benchmark in benchmark_results: - benchmark_details = benchmark_results[benchmark]["benchmark_details"] - label = f"{benchmark_details.nnp}/{benchmark_details.platform}/{benchmark_details.implementation}" - - ax1.plot( - benchmark_results[benchmark]["nr_of_atoms"], - benchmark_results[benchmark]["timing"], - label=label, - color=next(pal), - ) - if benchmark_details.platform == "CUDA": - ax2.plot( - benchmark_results[benchmark]["nr_of_atoms"], - np.array(benchmark_results[benchmark]["gpu_memory_footprint"]) - * 1.024e-9, - label=f"{label}-gpu mem", - linestyle="--", - color=next(pal), - ) - if ( - "reference" in benchmark_results[benchmark].keys() - and mention_reference_timing == True - ): - mention_reference_timing = False - ax1.plot( - benchmark_results[benchmark]["nr_of_atoms"], - benchmark_results[benchmark]["reference"], - label=f"MM/{benchmark_details.platform}/reference", - color=next(pal), - ) - - ax1.set_xlabel("Nr of atoms", fontsize=14) - ax1.set_ylabel("time (s)", fontsize=14) - ax2.set_ylabel("memory (Gb)", fontsize=14) - # ax1.yaxis.set_major_locator(ticker.MultipleLocator(0.1)) - ax2.grid(None) - # ask matplotlib for the plotted objects and their labels - fig.legend(loc="upper left", bbox_to_anchor=(0, 1), bbox_transform=ax1.transAxes) - plt.title(title, fontsize=14) - plt.tight_layout() - plt.savefig("benchmark_results.png") - plt.show() - - -def perform_benchmark(): - """ - Perform the benchmark simulations to plot single point energy execution time/GPU memory consumption vs number of atoms for a set of NNP and a reference MM potential. - """ - from exs.quams.benchmark import Benchmark - - # perform benchmark and save results - benchmark_results = dict() - - with Progress() as progress: - task1 = progress.add_task( - "[green]Performing simulation ...", total=len(system_to_benchmark) - ) - - for bench in system_to_benchmark: - print("#=================================#") - - benchmark = Benchmark() - benchmark_name = f"{bench.nnp}_{bench.platform}_{bench.implementation}" - print(f"{benchmark_name}") - - print("#-----------------------------------#") - spacing = np.linspace(10, 800, 4) - benchmark.run_benchmark( - bench.nnp, - (WaterCluster(n_waters=int(n_waters)) for n_waters in spacing), - True, - platform=bench.platform, - implementation=bench.implementation, - ) - benchmark_results[benchmark_name] = { - "nr_of_atoms": [int(n_waters) * 3 for n_waters in spacing], - "timing": benchmark.qml_timing, - "gpu_memory_footprint": benchmark.gpu_memory, - "reference": benchmark.reference_timing, - "benchmark_details": bench, - } - benchmark = None - log.info(f"Done with {benchmark_name}") - print(f"Results: {benchmark_results[benchmark_name]}") - progress.update(task1, advance=1) - - # plot and save - plot_timing(benchmark_results, "watercluster benchmark") - - -if __name__ == "__main__": - # ------------------------------------------------------# - # Defining the benchmark system - # ------------------------------------------------------# - benchmark_details = namedtuple("BenchmarkSystem", "nnp, platform, implementation") - system_to_benchmark = [ - benchmark_details(nnp="ani2x", platform="CUDA", implementation="nnpops"), - benchmark_details(nnp="ani2x", platform="CPU", implementation="torchani"), - benchmark_details(nnp="ani2x", platform="CPU", implementation="nnpops"), - benchmark_details(nnp="ani2x", platform="CUDA", implementation="torchani"), - ] - # ------------------------------------------------------# - # ------------------------------------------------------# - - fire.Fire(perform_benchmark) diff --git a/scripts/perform_stability_tests.py b/scripts/perform_stability_tests.py index 8e3b370..78cfd6a 100644 --- a/scripts/perform_stability_tests.py +++ b/scripts/perform_stability_tests.py @@ -40,27 +40,25 @@ def setup_logging_and_output() -> str: return output_folder -def validate_input(nnp: str, implementation: str): +def validate_input(nnp: str): """ - Validates the combination of neural network potential and implementation. + Validates the combination of neural network potential. Parameters ---------- nnp : str The neural network potential to validate. - implementation : str - The implementation to validate. Raises ------ RuntimeError - If the combination of NNP and implementation is invalid. + If the NNP is invalid. """ - from guardowl.utils import available_nnps_and_implementation + from guardowl.utils import available_nnps - if (nnp, implementation) not in available_nnps_and_implementation: - error_message = f"Invalid nnp/implementation combination. Valid combinations are: {available_nnps_and_implementation}. Got {nnp}/{implementation}" + if nnp not in available_nnps: + error_message = f"Invalid nnp. Got {nnp}" log.error(error_message) raise RuntimeError(error_message) @@ -126,6 +124,9 @@ def load_config(config_file_path: str) -> Dict[str, Any]: raise +from guardowl.testsystems import LiquidOption + + def process_test(test: Dict[str, Any], platform: Platform, output: str) -> None: """ Processes a single test configuration. @@ -141,17 +142,17 @@ def process_test(test: Dict[str, Any], platform: Platform, output: str) -> None: """ from guardowl.protocols import ( run_DOF_scan, - run_hipen_protocol, - run_waterbox_protocol, - run_alanine_dipeptide_protocol, - run_pure_liquid_protocol, + run_small_molecule_test, + run_waterbox_test, + run_alanine_dipeptide_test, + run_organic_liquid_test, ) protocol_function = { - "hipen_protocol": run_hipen_protocol, - "waterbox_protocol": run_waterbox_protocol, - "alanine_dipeptide_protocol": run_alanine_dipeptide_protocol, - "pure_liquid_protocol": run_pure_liquid_protocol, + "small_molecule_test": run_small_molecule_test, + "waterbox_test": run_waterbox_test, + "alanine_dipeptide_test": run_alanine_dipeptide_test, + "organic_liquid_test": run_organic_liquid_test, "DOF_scan": run_DOF_scan, }.get(test.get("protocol")) @@ -171,22 +172,55 @@ def main(config: str) -> None: config_path : str The path to the YAML configuration file. """ - from openmmml import MLPotential + from guardowl.setup import PotentialFactory log.info(f"Loaded config from {config}") config = load_config(config) platform = get_fastest_platform() output = setup_logging_and_output() - for test in config.get("tests", []): - print("--------- Test starts --------- ") - test["output_folder"] = output - test["reporter"] = create_state_data_reporter() - test["platform"] = platform - test["nnp"] = MLPotential(test["nnp"]) - - process_test(test, platform, output) - print("--------- Test finishs --------- ") + for potential in config.get("potentials", []): + + for test in config.get("tests", []): + print("--------- Test starts --------- ") + test["output_folder"] = output + test["reporter"] = create_state_data_reporter() + test["platform"] = platform + + # Set the potential as nnp + test["nnp"] = PotentialFactory().initialize_potential(potential) + + # Generate unique output folder based on provider and model name + output_folder_suffix = "" + if potential["provider"] == "physics-ml": + output_folder_suffix = f"_{potential['model_name']}" + if "rev" in potential: + output_folder_suffix += f"_{potential['rev']}" + elif potential["provider"] == "openmm-ml": + output_folder_suffix = ( + f"_{potential['model_name']}_{potential['implementation']}" + if potential["implementation"] is not None + else f"_{potential['model_name']}" + ) + + test["output_folder"] = ( + f"{test['output_folder']}/{potential['provider']}{output_folder_suffix}" + ) + + # Set unique nnp name to avoid using generic pointer for openmmml + if potential["provider"] == "physics-ml": + test["nnp_name"] = potential["model_name"] + if "rev" in potential: + test["nnp_name"] += f"_{potential['rev']}" + elif potential["provider"] == "openmm-ml": + test["nnp_name"] = ( + f"{potential['model_name']}" + if potential["implementation"] is None + else f"{potential['model_name']}_{potential['implementation']}" + ) + + process_test(test, platform, output) + print("--------- Test finished --------- ") def _setup_logging(): diff --git a/scripts/test_config.yaml b/scripts/test_config.yaml index 26ec34c..43e0d0a 100644 --- a/scripts/test_config.yaml +++ b/scripts/test_config.yaml @@ -1,54 +1,59 @@ # config.yaml +potentials: + - provider: "physics-ml" + model_name: "MACE" + precision: "64" + position_scaling: 10.0 + output_scaling: 2623.368 # 4.184 * 627 + model_path: "/guardowl/tests/data/physics-ml/mace" + device: "cuda" + + - provider: "openmm-ml" + model_name: "ANI2x" + tests: - - protocol: "alanine_dipeptide_protocol" + - protocol: "alanine_dipeptide_test" env: "solution" ensemble: "npt" - nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 50 temperature: 300 - - protocol: "alanine_dipeptide_protocol" + - protocol: "alanine_dipeptide_test" env: "vacuum" ensemble: "npt" - nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 500 temperature: 300 - - protocol: "hipen_protocol" - hipen_idx: [0, 1, 15] - nnp: "ani2x" - implementation: "torchani" + - protocol: "small_molecule_test" + smiles: + [ + r"CCOc1ccc2nc(/N=C\c3ccccc3O)sc2c1", + r"Cn1cc(Cl)c(/C=N/O)n1", + r"S=c1cc(-c2ccc(Cl)cc2)ss1", + ] temperature: [300, 400, 500] nr_of_simulation_steps: 500 - - protocol: "waterbox_protocol" + - protocol: "waterbox_test" edge_length: 25 ensemble: "npt" - nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 50 temperature: 300 - - protocol: "waterbox_protocol" + - protocol: "waterbox_test" edge_length: 25 ensemble: "npt" - nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 50 temperature: 500 - - protocol: "pure_liquid_protocol" + - protocol: "organic_liquid_test" molecule_name: ["ethane", "butane", "methanol"] nr_of_molecule: [100, 200, 300] ensemble: "npt" - nnp: "ani2x" - implementation: "torchani" annealing: false nr_of_simulation_steps: 50 nr_of_equilibration_steps: 50 diff --git a/test_stability_protocol/alanine_dipeptide_solvent_ani2x_torchani_NpT.csv b/test_stability_protocol/alanine_dipeptide_solvent_ani2x_torchani_NpT.csv deleted file mode 100644 index e69de29..0000000 diff --git a/test_stability_protocol/alanine_dipeptide_solvent_ani2x_torchani_NpT.pdb b/test_stability_protocol/alanine_dipeptide_solvent_ani2x_torchani_NpT.pdb deleted file mode 100644 index 675ea6f..0000000 --- a/test_stability_protocol/alanine_dipeptide_solvent_ani2x_torchani_NpT.pdb +++ /dev/null @@ -1,2287 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -CRYST1 32.853 32.862 31.855 90.00 90.00 90.00 P 1 1 -HETATM 1 H1 ACE A 1 15.908 11.969 16.089 1.00 0.00 H -HETATM 2 CH3 ACE A 1 15.377 12.899 15.886 1.00 0.00 C -HETATM 3 H2 ACE A 1 14.471 12.940 16.490 1.00 0.00 H -HETATM 4 H3 ACE A 1 15.112 12.945 14.830 1.00 0.00 H -HETATM 5 C ACE A 1 16.244 14.114 16.225 1.00 0.00 C -HETATM 6 O ACE A 1 17.382 13.964 16.665 1.00 0.00 O -ATOM 7 N ALA A 2 15.699 15.314 16.018 1.00 0.00 N -ATOM 8 H ALA A 2 14.759 15.386 15.655 1.00 0.00 H -ATOM 9 CA ALA A 2 16.418 16.541 16.300 1.00 0.00 C -ATOM 10 HA ALA A 2 16.683 16.572 17.357 1.00 0.00 H -ATOM 11 CB ALA A 2 17.696 16.630 15.473 1.00 0.00 C -ATOM 12 HB1 ALA A 2 17.446 16.609 14.413 1.00 0.00 H -ATOM 13 HB2 ALA A 2 18.215 17.560 15.705 1.00 0.00 H -ATOM 14 HB3 ALA A 2 18.343 15.785 15.711 1.00 0.00 H -ATOM 15 C ALA A 2 15.568 17.761 15.975 1.00 0.00 C -ATOM 16 O ALA A 2 14.428 17.628 15.534 1.00 0.00 O -HETATM 17 N NME A 3 16.126 18.953 16.194 1.00 0.00 N -HETATM 18 H NME A 3 17.066 19.012 16.558 1.00 0.00 H -HETATM 19 C NME A 3 15.420 20.190 15.926 1.00 0.00 C -HETATM 20 H1 NME A 3 14.425 19.965 15.540 1.00 0.00 H -HETATM 21 H2 NME A 3 15.330 20.766 16.847 1.00 0.00 H -HETATM 22 H3 NME A 3 15.972 20.771 15.187 1.00 0.00 H -HETATM 23 O HOH A 4 28.414 24.909 23.615 1.00 0.00 O -HETATM 24 H1 HOH A 4 28.334 23.995 23.344 1.00 0.00 H -HETATM 25 H2 HOH A 4 28.001 25.406 22.909 1.00 0.00 H -HETATM 26 O HOH A 5 26.546 26.687 25.496 1.00 0.00 O -HETATM 27 H1 HOH A 5 25.770 26.207 25.786 1.00 0.00 H -HETATM 28 H2 HOH A 5 27.197 26.008 25.321 1.00 0.00 H -HETATM 29 O HOH A 6 20.563 26.999 26.373 1.00 0.00 O -HETATM 30 H1 HOH A 6 19.731 26.744 26.773 1.00 0.00 H -HETATM 31 H2 HOH A 6 21.171 27.070 27.109 1.00 0.00 H -HETATM 32 O HOH A 7 18.972 21.959 20.158 1.00 0.00 O -HETATM 33 H1 HOH A 7 18.083 22.301 20.056 1.00 0.00 H -HETATM 34 H2 HOH A 7 19.256 21.760 19.266 1.00 0.00 H -HETATM 35 O HOH A 8 16.935 24.560 26.042 1.00 0.00 O -HETATM 36 H1 HOH A 8 17.507 23.792 26.042 1.00 0.00 H -HETATM 37 H2 HOH A 8 16.935 24.859 25.132 1.00 0.00 H -HETATM 38 O HOH A 9 25.987 29.363 25.503 1.00 0.00 O -HETATM 39 H1 HOH A 9 25.918 28.422 25.342 1.00 0.00 H -HETATM 40 H2 HOH A 9 26.749 29.453 26.075 1.00 0.00 H -HETATM 41 O HOH A 10 18.178 19.968 27.829 1.00 0.00 O -HETATM 42 H1 HOH A 10 17.998 19.071 28.109 1.00 0.00 H -HETATM 43 H2 HOH A 10 17.776 20.516 28.503 1.00 0.00 H -HETATM 44 O HOH A 11 27.017 22.170 25.730 1.00 0.00 O -HETATM 45 H1 HOH A 11 27.394 21.297 25.617 1.00 0.00 H -HETATM 46 H2 HOH A 11 26.919 22.506 24.839 1.00 0.00 H -HETATM 47 O HOH A 12 21.148 20.543 21.191 1.00 0.00 O -HETATM 48 H1 HOH A 12 21.255 21.443 21.498 1.00 0.00 H -HETATM 49 H2 HOH A 12 20.237 20.494 20.901 1.00 0.00 H -HETATM 50 O HOH A 13 18.796 22.465 26.437 1.00 0.00 O -HETATM 51 H1 HOH A 13 19.477 22.728 27.055 1.00 0.00 H -HETATM 52 H2 HOH A 13 18.481 21.625 26.771 1.00 0.00 H -HETATM 53 O HOH A 14 22.989 23.511 25.524 1.00 0.00 O -HETATM 54 H1 HOH A 14 23.496 24.009 26.165 1.00 0.00 H -HETATM 55 H2 HOH A 14 23.520 22.735 25.348 1.00 0.00 H -HETATM 56 O HOH A 15 21.272 18.151 29.790 1.00 0.00 O -HETATM 57 H1 HOH A 15 21.274 18.668 28.985 1.00 0.00 H -HETATM 58 H2 HOH A 15 20.443 17.674 29.767 1.00 0.00 H -HETATM 59 O HOH A 16 27.659 28.263 21.289 1.00 0.00 O -HETATM 60 H1 HOH A 16 27.041 28.728 20.726 1.00 0.00 H -HETATM 61 H2 HOH A 16 28.172 28.956 21.706 1.00 0.00 H -HETATM 62 O HOH A 17 22.523 27.791 27.968 1.00 0.00 O -HETATM 63 H1 HOH A 17 22.189 28.418 28.610 1.00 0.00 H -HETATM 64 H2 HOH A 17 22.699 28.317 27.188 1.00 0.00 H -HETATM 65 O HOH A 18 20.954 19.862 27.797 1.00 0.00 O -HETATM 66 H1 HOH A 18 21.295 20.706 27.503 1.00 0.00 H -HETATM 67 H2 HOH A 18 20.015 20.011 27.914 1.00 0.00 H -HETATM 68 O HOH A 19 21.734 29.759 29.783 1.00 0.00 O -HETATM 69 H1 HOH A 19 22.352 30.434 29.501 1.00 0.00 H -HETATM 70 H2 HOH A 19 20.874 30.168 29.691 1.00 0.00 H -HETATM 71 O HOH A 20 17.028 28.949 18.663 1.00 0.00 O -HETATM 72 H1 HOH A 20 16.650 29.437 17.932 1.00 0.00 H -HETATM 73 H2 HOH A 20 17.285 29.621 19.294 1.00 0.00 H -HETATM 74 O HOH A 21 24.637 17.350 24.122 1.00 0.00 O -HETATM 75 H1 HOH A 21 24.944 16.795 23.405 1.00 0.00 H -HETATM 76 H2 HOH A 21 23.707 17.485 23.939 1.00 0.00 H -HETATM 77 O HOH A 22 29.587 27.970 27.741 1.00 0.00 O -HETATM 78 H1 HOH A 22 30.003 27.756 26.906 1.00 0.00 H -HETATM 79 H2 HOH A 22 30.311 28.227 28.312 1.00 0.00 H -HETATM 80 O HOH A 23 27.025 25.415 20.858 1.00 0.00 O -HETATM 81 H1 HOH A 23 26.098 25.349 21.087 1.00 0.00 H -HETATM 82 H2 HOH A 23 27.177 26.353 20.743 1.00 0.00 H -HETATM 83 O HOH A 24 27.012 21.687 17.855 1.00 0.00 O -HETATM 84 H1 HOH A 24 26.072 21.848 17.940 1.00 0.00 H -HETATM 85 H2 HOH A 24 27.330 22.406 17.308 1.00 0.00 H -HETATM 86 O HOH A 25 31.054 26.977 21.361 1.00 0.00 O -HETATM 87 H1 HOH A 25 30.436 26.639 20.714 1.00 0.00 H -HETATM 88 H2 HOH A 25 31.037 26.333 22.069 1.00 0.00 H -HETATM 89 O HOH A 26 30.497 23.156 28.778 1.00 0.00 O -HETATM 90 H1 HOH A 26 30.084 23.981 29.032 1.00 0.00 H -HETATM 91 H2 HOH A 26 29.765 22.570 28.586 1.00 0.00 H -HETATM 92 O HOH A 27 22.630 25.942 23.640 1.00 0.00 O -HETATM 93 H1 HOH A 27 22.226 25.229 23.144 1.00 0.00 H -HETATM 94 H2 HOH A 27 22.717 25.597 24.529 1.00 0.00 H -HETATM 95 O HOH A 28 23.098 29.628 25.804 1.00 0.00 O -HETATM 96 H1 HOH A 28 22.801 29.023 25.125 1.00 0.00 H -HETATM 97 H2 HOH A 28 24.048 29.666 25.693 1.00 0.00 H -HETATM 98 O HOH A 29 21.343 22.716 27.420 1.00 0.00 O -HETATM 99 H1 HOH A 29 21.895 22.826 26.645 1.00 0.00 H -HETATM 100 H2 HOH A 29 21.858 23.090 28.135 1.00 0.00 H -HETATM 101 O HOH A 30 29.231 26.216 18.369 1.00 0.00 O -HETATM 102 H1 HOH A 30 29.670 25.378 18.222 1.00 0.00 H -HETATM 103 H2 HOH A 30 29.944 26.849 18.455 1.00 0.00 H -HETATM 104 O HOH A 31 19.331 24.836 21.140 1.00 0.00 O -HETATM 105 H1 HOH A 31 19.211 25.562 20.529 1.00 0.00 H -HETATM 106 H2 HOH A 31 19.021 24.067 20.663 1.00 0.00 H -HETATM 107 O HOH A 32 16.969 28.008 26.947 1.00 0.00 O -HETATM 108 H1 HOH A 32 17.047 28.143 26.003 1.00 0.00 H -HETATM 109 H2 HOH A 32 17.583 27.299 27.140 1.00 0.00 H -HETATM 110 O HOH A 33 18.214 29.708 23.358 1.00 0.00 O -HETATM 111 H1 HOH A 33 17.807 29.849 22.503 1.00 0.00 H -HETATM 112 H2 HOH A 33 19.105 29.424 23.155 1.00 0.00 H -HETATM 113 O HOH A 34 17.025 29.049 29.487 1.00 0.00 O -HETATM 114 H1 HOH A 34 17.188 28.580 28.669 1.00 0.00 H -HETATM 115 H2 HOH A 34 17.490 28.542 30.152 1.00 0.00 H -HETATM 116 O HOH A 35 21.797 18.180 24.523 1.00 0.00 O -HETATM 117 H1 HOH A 35 21.354 18.961 24.191 1.00 0.00 H -HETATM 118 H2 HOH A 35 22.356 18.503 25.230 1.00 0.00 H -HETATM 119 O HOH A 36 24.913 17.801 19.403 1.00 0.00 O -HETATM 120 H1 HOH A 36 24.288 17.797 20.129 1.00 0.00 H -HETATM 121 H2 HOH A 36 24.826 16.934 19.007 1.00 0.00 H -HETATM 122 O HOH A 37 23.835 18.724 26.382 1.00 0.00 O -HETATM 123 H1 HOH A 37 24.132 19.631 26.301 1.00 0.00 H -HETATM 124 H2 HOH A 37 24.383 18.236 25.768 1.00 0.00 H -HETATM 125 O HOH A 38 21.589 23.303 22.251 1.00 0.00 O -HETATM 126 H1 HOH A 38 21.363 23.087 23.156 1.00 0.00 H -HETATM 127 H2 HOH A 38 20.808 23.736 21.906 1.00 0.00 H -HETATM 128 O HOH A 39 28.818 23.309 20.850 1.00 0.00 O -HETATM 129 H1 HOH A 39 28.219 24.033 20.666 1.00 0.00 H -HETATM 130 H2 HOH A 39 29.366 23.247 20.068 1.00 0.00 H -HETATM 131 O HOH A 40 27.425 21.946 22.880 1.00 0.00 O -HETATM 132 H1 HOH A 40 27.818 22.263 22.067 1.00 0.00 H -HETATM 133 H2 HOH A 40 27.787 21.067 22.995 1.00 0.00 H -HETATM 134 O HOH A 41 16.461 18.536 25.103 1.00 0.00 O -HETATM 135 H1 HOH A 41 16.173 19.106 25.816 1.00 0.00 H -HETATM 136 H2 HOH A 41 17.206 18.056 25.467 1.00 0.00 H -HETATM 137 O HOH A 42 28.010 24.536 26.975 1.00 0.00 O -HETATM 138 H1 HOH A 42 27.278 25.045 27.324 1.00 0.00 H -HETATM 139 H2 HOH A 42 27.613 23.719 26.674 1.00 0.00 H -HETATM 140 O HOH A 43 24.448 21.212 25.381 1.00 0.00 O -HETATM 141 H1 HOH A 43 24.452 20.771 24.531 1.00 0.00 H -HETATM 142 H2 HOH A 43 25.343 21.534 25.488 1.00 0.00 H -HETATM 143 O HOH A 44 20.298 21.094 24.340 1.00 0.00 O -HETATM 144 H1 HOH A 44 19.958 21.572 25.097 1.00 0.00 H -HETATM 145 H2 HOH A 44 19.536 20.641 23.980 1.00 0.00 H -HETATM 146 O HOH A 45 24.510 22.213 18.371 1.00 0.00 O -HETATM 147 H1 HOH A 45 24.631 22.172 19.320 1.00 0.00 H -HETATM 148 H2 HOH A 45 24.125 23.075 18.216 1.00 0.00 H -HETATM 149 O HOH A 46 28.473 19.990 26.388 1.00 0.00 O -HETATM 150 H1 HOH A 46 28.490 20.441 27.232 1.00 0.00 H -HETATM 151 H2 HOH A 46 28.224 19.090 26.601 1.00 0.00 H -HETATM 152 O HOH A 47 23.522 24.523 17.770 1.00 0.00 O -HETATM 153 H1 HOH A 47 22.954 24.075 17.143 1.00 0.00 H -HETATM 154 H2 HOH A 47 24.231 24.882 17.236 1.00 0.00 H -HETATM 155 O HOH A 48 24.749 25.272 27.127 1.00 0.00 O -HETATM 156 H1 HOH A 48 25.116 24.798 27.873 1.00 0.00 H -HETATM 157 H2 HOH A 48 24.559 26.146 27.468 1.00 0.00 H -HETATM 158 O HOH A 49 17.613 20.016 23.257 1.00 0.00 O -HETATM 159 H1 HOH A 49 17.328 19.652 24.094 1.00 0.00 H -HETATM 160 H2 HOH A 49 17.551 19.284 22.643 1.00 0.00 H -HETATM 161 O HOH A 50 22.539 24.313 29.446 1.00 0.00 O -HETATM 162 H1 HOH A 50 22.235 25.192 29.671 1.00 0.00 H -HETATM 163 H2 HOH A 50 23.493 24.373 29.481 1.00 0.00 H -HETATM 164 O HOH A 51 21.067 28.519 20.042 1.00 0.00 O -HETATM 165 H1 HOH A 51 20.293 27.979 19.882 1.00 0.00 H -HETATM 166 H2 HOH A 51 21.796 28.000 19.704 1.00 0.00 H -HETATM 167 O HOH A 52 27.287 18.909 19.978 1.00 0.00 O -HETATM 168 H1 HOH A 52 26.473 18.411 19.902 1.00 0.00 H -HETATM 169 H2 HOH A 52 27.093 19.749 19.562 1.00 0.00 H -HETATM 170 O HOH A 53 30.002 23.281 18.274 1.00 0.00 O -HETATM 171 H1 HOH A 53 30.890 23.593 18.099 1.00 0.00 H -HETATM 172 H2 HOH A 53 29.972 22.408 17.882 1.00 0.00 H -HETATM 173 O HOH A 54 21.111 28.187 23.680 1.00 0.00 O -HETATM 174 H1 HOH A 54 21.629 27.384 23.626 1.00 0.00 H -HETATM 175 H2 HOH A 54 20.659 28.125 24.522 1.00 0.00 H -HETATM 176 O HOH A 55 25.998 29.454 18.953 1.00 0.00 O -HETATM 177 H1 HOH A 55 26.339 30.198 18.457 1.00 0.00 H -HETATM 178 H2 HOH A 55 25.169 29.767 19.315 1.00 0.00 H -HETATM 179 O HOH A 56 28.880 28.775 24.318 1.00 0.00 O -HETATM 180 H1 HOH A 56 29.233 28.178 23.658 1.00 0.00 H -HETATM 181 H2 HOH A 56 27.997 28.450 24.488 1.00 0.00 H -HETATM 182 O HOH A 57 24.967 29.535 21.725 1.00 0.00 O -HETATM 183 H1 HOH A 57 25.654 30.082 22.105 1.00 0.00 H -HETATM 184 H2 HOH A 57 24.180 30.079 21.760 1.00 0.00 H -HETATM 185 O HOH A 58 17.106 25.152 17.216 1.00 0.00 O -HETATM 186 H1 HOH A 58 17.975 25.435 17.500 1.00 0.00 H -HETATM 187 H2 HOH A 58 16.615 25.966 17.101 1.00 0.00 H -HETATM 188 O HOH A 59 24.269 26.540 21.337 1.00 0.00 O -HETATM 189 H1 HOH A 59 24.726 27.350 21.563 1.00 0.00 H -HETATM 190 H2 HOH A 59 23.918 26.222 22.169 1.00 0.00 H -HETATM 191 O HOH A 60 20.171 16.883 21.809 1.00 0.00 O -HETATM 192 H1 HOH A 60 20.042 16.875 22.758 1.00 0.00 H -HETATM 193 H2 HOH A 60 19.347 17.222 21.458 1.00 0.00 H -HETATM 194 O HOH A 61 27.846 30.053 27.284 1.00 0.00 O -HETATM 195 H1 HOH A 61 28.488 29.353 27.397 1.00 0.00 H -HETATM 196 H2 HOH A 61 28.371 30.833 27.104 1.00 0.00 H -HETATM 197 O HOH A 62 19.091 26.970 19.344 1.00 0.00 O -HETATM 198 H1 HOH A 62 18.483 27.709 19.354 1.00 0.00 H -HETATM 199 H2 HOH A 62 19.566 27.059 18.518 1.00 0.00 H -HETATM 200 O HOH A 63 28.664 21.135 29.020 1.00 0.00 O -HETATM 201 H1 HOH A 63 29.032 20.314 29.348 1.00 0.00 H -HETATM 202 H2 HOH A 63 27.804 21.195 29.436 1.00 0.00 H -HETATM 203 O HOH A 64 23.999 22.369 21.245 1.00 0.00 O -HETATM 204 H1 HOH A 64 23.290 22.838 21.686 1.00 0.00 H -HETATM 205 H2 HOH A 64 24.283 21.711 21.879 1.00 0.00 H -HETATM 206 O HOH A 65 25.624 23.789 29.244 1.00 0.00 O -HETATM 207 H1 HOH A 65 26.123 24.263 29.909 1.00 0.00 H -HETATM 208 H2 HOH A 65 25.766 22.865 29.451 1.00 0.00 H -HETATM 209 O HOH A 66 28.030 19.094 22.684 1.00 0.00 O -HETATM 210 H1 HOH A 66 27.907 19.113 21.735 1.00 0.00 H -HETATM 211 H2 HOH A 66 28.979 19.142 22.804 1.00 0.00 H -HETATM 212 O HOH A 67 22.202 20.677 18.620 1.00 0.00 O -HETATM 213 H1 HOH A 67 23.051 21.114 18.554 1.00 0.00 H -HETATM 214 H2 HOH A 67 21.835 20.989 19.447 1.00 0.00 H -HETATM 215 O HOH A 68 21.101 26.931 17.093 1.00 0.00 O -HETATM 216 H1 HOH A 68 21.867 26.819 17.656 1.00 0.00 H -HETATM 217 H2 HOH A 68 21.179 26.234 16.441 1.00 0.00 H -HETATM 218 O HOH A 69 19.796 24.363 17.777 1.00 0.00 O -HETATM 219 H1 HOH A 69 19.876 23.416 17.888 1.00 0.00 H -HETATM 220 H2 HOH A 69 20.688 24.694 17.883 1.00 0.00 H -HETATM 221 O HOH A 70 24.225 28.906 16.567 1.00 0.00 O -HETATM 222 H1 HOH A 70 24.120 28.291 17.293 1.00 0.00 H -HETATM 223 H2 HOH A 70 24.058 28.383 15.783 1.00 0.00 H -HETATM 224 O HOH A 71 27.466 27.968 17.171 1.00 0.00 O -HETATM 225 H1 HOH A 71 26.917 28.415 17.815 1.00 0.00 H -HETATM 226 H2 HOH A 71 28.087 27.463 17.695 1.00 0.00 H -HETATM 227 O HOH A 72 23.133 26.927 19.068 1.00 0.00 O -HETATM 228 H1 HOH A 72 23.555 26.761 19.911 1.00 0.00 H -HETATM 229 H2 HOH A 72 23.258 26.117 18.573 1.00 0.00 H -HETATM 230 O HOH A 73 25.646 25.951 16.315 1.00 0.00 O -HETATM 231 H1 HOH A 73 26.166 25.236 15.949 1.00 0.00 H -HETATM 232 H2 HOH A 73 26.293 26.590 16.615 1.00 0.00 H -HETATM 233 O HOH A 74 24.549 18.430 28.987 1.00 0.00 O -HETATM 234 H1 HOH A 74 24.101 18.453 28.142 1.00 0.00 H -HETATM 235 H2 HOH A 74 23.916 18.032 29.584 1.00 0.00 H -HETATM 236 O HOH A 75 24.955 27.326 29.608 1.00 0.00 O -HETATM 237 H1 HOH A 75 25.374 28.169 29.436 1.00 0.00 H -HETATM 238 H2 HOH A 75 24.036 27.463 29.379 1.00 0.00 H -HETATM 239 O HOH A 76 29.630 25.611 29.568 1.00 0.00 O -HETATM 240 H1 HOH A 76 29.104 26.135 28.965 1.00 0.00 H -HETATM 241 H2 HOH A 76 29.973 26.244 30.199 1.00 0.00 H -HETATM 242 O HOH A 77 22.029 23.001 16.013 1.00 0.00 O -HETATM 243 H1 HOH A 77 21.828 22.137 16.375 1.00 0.00 H -HETATM 244 H2 HOH A 77 21.858 22.914 15.076 1.00 0.00 H -HETATM 245 O HOH A 78 29.508 17.811 18.542 1.00 0.00 O -HETATM 246 H1 HOH A 78 29.788 16.968 18.898 1.00 0.00 H -HETATM 247 H2 HOH A 78 28.734 18.044 19.056 1.00 0.00 H -HETATM 248 O HOH A 79 20.827 20.101 16.001 1.00 0.00 O -HETATM 249 H1 HOH A 79 21.130 20.107 15.093 1.00 0.00 H -HETATM 250 H2 HOH A 79 21.567 19.750 16.498 1.00 0.00 H -HETATM 251 O HOH A 80 24.046 19.044 16.987 1.00 0.00 O -HETATM 252 H1 HOH A 80 23.698 18.366 16.407 1.00 0.00 H -HETATM 253 H2 HOH A 80 24.247 18.583 17.801 1.00 0.00 H -HETATM 254 O HOH A 81 19.850 29.405 16.834 1.00 0.00 O -HETATM 255 H1 HOH A 81 20.288 29.948 17.490 1.00 0.00 H -HETATM 256 H2 HOH A 81 20.335 28.580 16.844 1.00 0.00 H -HETATM 257 O HOH A 82 21.661 30.525 21.946 1.00 0.00 O -HETATM 258 H1 HOH A 82 21.361 30.401 22.847 1.00 0.00 H -HETATM 259 H2 HOH A 82 21.555 29.665 21.538 1.00 0.00 H -HETATM 260 O HOH A 83 17.386 25.573 23.383 1.00 0.00 O -HETATM 261 H1 HOH A 83 16.731 25.304 22.739 1.00 0.00 H -HETATM 262 H2 HOH A 83 18.224 25.463 22.933 1.00 0.00 H -HETATM 263 O HOH A 84 30.335 20.367 17.605 1.00 0.00 O -HETATM 264 H1 HOH A 84 30.754 20.180 16.765 1.00 0.00 H -HETATM 265 H2 HOH A 84 30.029 19.515 17.915 1.00 0.00 H -HETATM 266 O HOH A 85 18.424 25.958 27.924 1.00 0.00 O -HETATM 267 H1 HOH A 85 18.791 25.871 28.803 1.00 0.00 H -HETATM 268 H2 HOH A 85 17.855 25.195 27.824 1.00 0.00 H -HETATM 269 O HOH A 86 16.600 22.783 19.326 1.00 0.00 O -HETATM 270 H1 HOH A 86 15.697 23.046 19.151 1.00 0.00 H -HETATM 271 H2 HOH A 86 17.084 23.054 18.546 1.00 0.00 H -HETATM 272 O HOH A 87 19.143 21.839 17.235 1.00 0.00 O -HETATM 273 H1 HOH A 87 19.852 21.418 16.750 1.00 0.00 H -HETATM 274 H2 HOH A 87 18.427 21.907 16.604 1.00 0.00 H -HETATM 275 O HOH A 88 18.479 17.144 26.178 1.00 0.00 O -HETATM 276 H1 HOH A 88 19.127 16.594 25.737 1.00 0.00 H -HETATM 277 H2 HOH A 88 18.900 17.398 26.999 1.00 0.00 H -HETATM 278 O HOH A 89 18.233 17.299 28.920 1.00 0.00 O -HETATM 279 H1 HOH A 89 17.884 17.756 29.686 1.00 0.00 H -HETATM 280 H2 HOH A 89 17.901 16.405 29.003 1.00 0.00 H -HETATM 281 O HOH A 90 29.123 16.711 28.408 1.00 0.00 O -HETATM 282 H1 HOH A 90 28.249 17.044 28.206 1.00 0.00 H -HETATM 283 H2 HOH A 90 29.014 16.238 29.234 1.00 0.00 H -HETATM 284 O HOH A 91 30.031 18.918 29.793 1.00 0.00 O -HETATM 285 H1 HOH A 91 29.702 18.103 29.413 1.00 0.00 H -HETATM 286 H2 HOH A 91 30.979 18.875 29.669 1.00 0.00 H -HETATM 287 O HOH A 92 26.871 17.628 27.348 1.00 0.00 O -HETATM 288 H1 HOH A 92 26.088 18.102 27.627 1.00 0.00 H -HETATM 289 H2 HOH A 92 26.577 16.723 27.239 1.00 0.00 H -HETATM 290 O HOH A 93 18.215 17.933 19.869 1.00 0.00 O -HETATM 291 H1 HOH A 93 18.973 18.045 19.295 1.00 0.00 H -HETATM 292 H2 HOH A 93 17.753 18.769 19.823 1.00 0.00 H -HETATM 293 O HOH A 94 24.756 20.046 22.859 1.00 0.00 O -HETATM 294 H1 HOH A 94 23.944 19.672 22.519 1.00 0.00 H -HETATM 295 H2 HOH A 94 25.260 19.291 23.161 1.00 0.00 H -HETATM 296 O HOH A 95 29.259 16.711 24.098 1.00 0.00 O -HETATM 297 H1 HOH A 95 29.862 17.283 24.572 1.00 0.00 H -HETATM 298 H2 HOH A 95 28.518 17.275 23.875 1.00 0.00 H -HETATM 299 O HOH A 96 20.587 18.459 18.409 1.00 0.00 O -HETATM 300 H1 HOH A 96 21.117 17.672 18.280 1.00 0.00 H -HETATM 301 H2 HOH A 96 21.220 19.138 18.643 1.00 0.00 H -HETATM 302 O HOH A 97 22.781 18.196 21.464 1.00 0.00 O -HETATM 303 H1 HOH A 97 22.151 17.495 21.631 1.00 0.00 H -HETATM 304 H2 HOH A 97 22.242 18.957 21.247 1.00 0.00 H -HETATM 305 O HOH A 98 28.414 24.909 4.841 1.00 0.00 O -HETATM 306 H1 HOH A 98 28.334 23.995 4.570 1.00 0.00 H -HETATM 307 H2 HOH A 98 28.001 25.406 4.135 1.00 0.00 H -HETATM 308 O HOH A 99 26.546 26.687 6.721 1.00 0.00 O -HETATM 309 H1 HOH A 99 25.770 26.207 7.011 1.00 0.00 H -HETATM 310 H2 HOH A 99 27.197 26.008 6.547 1.00 0.00 H -HETATM 311 O HOH A 100 20.563 26.999 7.599 1.00 0.00 O -HETATM 312 H1 HOH A 100 19.731 26.744 7.999 1.00 0.00 H -HETATM 313 H2 HOH A 100 21.171 27.070 8.335 1.00 0.00 H -HETATM 314 O HOH A 101 16.935 24.560 7.267 1.00 0.00 O -HETATM 315 H1 HOH A 101 17.507 23.792 7.268 1.00 0.00 H -HETATM 316 H2 HOH A 101 16.935 24.859 6.358 1.00 0.00 H -HETATM 317 O HOH A 102 25.987 29.363 6.728 1.00 0.00 O -HETATM 318 H1 HOH A 102 25.918 28.422 6.567 1.00 0.00 H -HETATM 319 H2 HOH A 102 26.749 29.453 7.301 1.00 0.00 H -HETATM 320 O HOH A 103 18.178 19.968 9.054 1.00 0.00 O -HETATM 321 H1 HOH A 103 17.998 19.071 9.334 1.00 0.00 H -HETATM 322 H2 HOH A 103 17.776 20.516 9.729 1.00 0.00 H -HETATM 323 O HOH A 104 27.017 22.170 6.955 1.00 0.00 O -HETATM 324 H1 HOH A 104 27.394 21.297 6.843 1.00 0.00 H -HETATM 325 H2 HOH A 104 26.919 22.506 6.064 1.00 0.00 H -HETATM 326 O HOH A 105 21.148 20.543 2.417 1.00 0.00 O -HETATM 327 H1 HOH A 105 21.255 21.443 2.724 1.00 0.00 H -HETATM 328 H2 HOH A 105 20.237 20.494 2.127 1.00 0.00 H -HETATM 329 O HOH A 106 18.796 22.465 7.662 1.00 0.00 O -HETATM 330 H1 HOH A 106 19.477 22.728 8.281 1.00 0.00 H -HETATM 331 H2 HOH A 106 18.481 21.625 7.996 1.00 0.00 H -HETATM 332 O HOH A 107 22.989 23.511 6.750 1.00 0.00 O -HETATM 333 H1 HOH A 107 23.496 24.009 7.390 1.00 0.00 H -HETATM 334 H2 HOH A 107 23.520 22.735 6.574 1.00 0.00 H -HETATM 335 O HOH A 108 21.272 18.151 11.016 1.00 0.00 O -HETATM 336 H1 HOH A 108 21.274 18.668 10.211 1.00 0.00 H -HETATM 337 H2 HOH A 108 20.443 17.674 10.993 1.00 0.00 H -HETATM 338 O HOH A 109 27.659 28.263 2.515 1.00 0.00 O -HETATM 339 H1 HOH A 109 27.041 28.728 1.951 1.00 0.00 H -HETATM 340 H2 HOH A 109 28.172 28.956 2.932 1.00 0.00 H -HETATM 341 O HOH A 110 22.523 27.791 9.193 1.00 0.00 O -HETATM 342 H1 HOH A 110 22.189 28.418 9.835 1.00 0.00 H -HETATM 343 H2 HOH A 110 22.699 28.317 8.414 1.00 0.00 H -HETATM 344 O HOH A 111 20.954 19.862 9.023 1.00 0.00 O -HETATM 345 H1 HOH A 111 21.295 20.706 8.728 1.00 0.00 H -HETATM 346 H2 HOH A 111 20.015 20.011 9.140 1.00 0.00 H -HETATM 347 O HOH A 112 21.734 29.759 11.008 1.00 0.00 O -HETATM 348 H1 HOH A 112 22.352 30.434 10.727 1.00 0.00 H -HETATM 349 H2 HOH A 112 20.874 30.168 10.917 1.00 0.00 H -HETATM 350 O HOH A 113 24.637 17.350 5.347 1.00 0.00 O -HETATM 351 H1 HOH A 113 24.944 16.795 4.631 1.00 0.00 H -HETATM 352 H2 HOH A 113 23.707 17.485 5.165 1.00 0.00 H -HETATM 353 O HOH A 114 29.587 27.970 8.967 1.00 0.00 O -HETATM 354 H1 HOH A 114 30.003 27.756 8.132 1.00 0.00 H -HETATM 355 H2 HOH A 114 30.311 28.227 9.537 1.00 0.00 H -HETATM 356 O HOH A 115 27.025 25.415 2.084 1.00 0.00 O -HETATM 357 H1 HOH A 115 26.098 25.349 2.312 1.00 0.00 H -HETATM 358 H2 HOH A 115 27.177 26.353 1.969 1.00 0.00 H -HETATM 359 O HOH A 116 31.054 26.977 2.587 1.00 0.00 O -HETATM 360 H1 HOH A 116 30.436 26.639 1.940 1.00 0.00 H -HETATM 361 H2 HOH A 116 31.037 26.333 3.295 1.00 0.00 H -HETATM 362 O HOH A 117 30.497 23.156 10.004 1.00 0.00 O -HETATM 363 H1 HOH A 117 30.084 23.981 10.258 1.00 0.00 H -HETATM 364 H2 HOH A 117 29.765 22.570 9.811 1.00 0.00 H -HETATM 365 O HOH A 118 22.630 25.942 4.865 1.00 0.00 O -HETATM 366 H1 HOH A 118 22.226 25.229 4.370 1.00 0.00 H -HETATM 367 H2 HOH A 118 22.717 25.597 5.754 1.00 0.00 H -HETATM 368 O HOH A 119 23.098 29.628 7.029 1.00 0.00 O -HETATM 369 H1 HOH A 119 22.801 29.023 6.350 1.00 0.00 H -HETATM 370 H2 HOH A 119 24.048 29.666 6.918 1.00 0.00 H -HETATM 371 O HOH A 120 21.343 22.716 8.645 1.00 0.00 O -HETATM 372 H1 HOH A 120 21.895 22.826 7.871 1.00 0.00 H -HETATM 373 H2 HOH A 120 21.858 23.090 9.361 1.00 0.00 H -HETATM 374 O HOH A 121 22.190 29.367 13.680 1.00 0.00 O -HETATM 375 H1 HOH A 121 21.293 29.591 13.928 1.00 0.00 H -HETATM 376 H2 HOH A 121 22.216 29.490 12.731 1.00 0.00 H -HETATM 377 O HOH A 122 21.017 26.238 12.256 1.00 0.00 O -HETATM 378 H1 HOH A 122 20.878 27.110 12.625 1.00 0.00 H -HETATM 379 H2 HOH A 122 20.136 25.895 12.111 1.00 0.00 H -HETATM 380 O HOH A 123 19.331 24.836 2.366 1.00 0.00 O -HETATM 381 H1 HOH A 123 19.211 25.562 1.754 1.00 0.00 H -HETATM 382 H2 HOH A 123 19.021 24.067 1.889 1.00 0.00 H -HETATM 383 O HOH A 124 16.969 28.008 8.173 1.00 0.00 O -HETATM 384 H1 HOH A 124 17.047 28.143 7.229 1.00 0.00 H -HETATM 385 H2 HOH A 124 17.583 27.299 8.366 1.00 0.00 H -HETATM 386 O HOH A 125 18.214 29.708 4.584 1.00 0.00 O -HETATM 387 H1 HOH A 125 17.807 29.849 3.729 1.00 0.00 H -HETATM 388 H2 HOH A 125 19.105 29.424 4.381 1.00 0.00 H -HETATM 389 O HOH A 126 17.025 29.049 10.712 1.00 0.00 O -HETATM 390 H1 HOH A 126 17.188 28.580 9.894 1.00 0.00 H -HETATM 391 H2 HOH A 126 17.490 28.542 11.377 1.00 0.00 H -HETATM 392 O HOH A 127 21.797 18.180 5.749 1.00 0.00 O -HETATM 393 H1 HOH A 127 21.354 18.961 5.417 1.00 0.00 H -HETATM 394 H2 HOH A 127 22.356 18.503 6.456 1.00 0.00 H -HETATM 395 O HOH A 128 26.084 21.047 11.352 1.00 0.00 O -HETATM 396 H1 HOH A 128 25.622 21.255 12.164 1.00 0.00 H -HETATM 397 H2 HOH A 128 25.682 20.233 11.049 1.00 0.00 H -HETATM 398 O HOH A 129 31.085 22.267 12.482 1.00 0.00 O -HETATM 399 H1 HOH A 129 30.234 21.968 12.803 1.00 0.00 H -HETATM 400 H2 HOH A 129 30.925 22.512 11.570 1.00 0.00 H -HETATM 401 O HOH A 130 28.180 23.768 14.582 1.00 0.00 O -HETATM 402 H1 HOH A 130 28.505 22.934 14.242 1.00 0.00 H -HETATM 403 H2 HOH A 130 28.968 24.291 14.729 1.00 0.00 H -HETATM 404 O HOH A 131 23.835 18.724 7.607 1.00 0.00 O -HETATM 405 H1 HOH A 131 24.132 19.631 7.527 1.00 0.00 H -HETATM 406 H2 HOH A 131 24.383 18.236 6.993 1.00 0.00 H -HETATM 407 O HOH A 132 21.589 23.303 3.477 1.00 0.00 O -HETATM 408 H1 HOH A 132 21.363 23.087 4.381 1.00 0.00 H -HETATM 409 H2 HOH A 132 20.808 23.736 3.131 1.00 0.00 H -HETATM 410 O HOH A 133 28.818 23.309 2.076 1.00 0.00 O -HETATM 411 H1 HOH A 133 28.219 24.033 1.892 1.00 0.00 H -HETATM 412 H2 HOH A 133 29.366 23.247 1.293 1.00 0.00 H -HETATM 413 O HOH A 134 24.028 24.202 14.143 1.00 0.00 O -HETATM 414 H1 HOH A 134 23.933 23.261 13.993 1.00 0.00 H -HETATM 415 H2 HOH A 134 24.872 24.423 13.747 1.00 0.00 H -HETATM 416 O HOH A 135 27.425 21.946 4.106 1.00 0.00 O -HETATM 417 H1 HOH A 135 27.818 22.263 3.293 1.00 0.00 H -HETATM 418 H2 HOH A 135 27.787 21.067 4.220 1.00 0.00 H -HETATM 419 O HOH A 136 19.160 20.613 12.296 1.00 0.00 O -HETATM 420 H1 HOH A 136 18.766 21.461 12.503 1.00 0.00 H -HETATM 421 H2 HOH A 136 18.471 19.976 12.487 1.00 0.00 H -HETATM 422 O HOH A 137 25.734 20.697 15.366 1.00 0.00 O -HETATM 423 H1 HOH A 137 25.044 20.504 16.000 1.00 0.00 H -HETATM 424 H2 HOH A 137 26.477 20.980 15.898 1.00 0.00 H -HETATM 425 O HOH A 138 16.461 18.536 6.329 1.00 0.00 O -HETATM 426 H1 HOH A 138 16.173 19.106 7.042 1.00 0.00 H -HETATM 427 H2 HOH A 138 17.206 18.056 6.692 1.00 0.00 H -HETATM 428 O HOH A 139 28.010 24.536 8.201 1.00 0.00 O -HETATM 429 H1 HOH A 139 27.278 25.045 8.550 1.00 0.00 H -HETATM 430 H2 HOH A 139 27.613 23.719 7.900 1.00 0.00 H -HETATM 431 O HOH A 140 24.448 21.212 6.606 1.00 0.00 O -HETATM 432 H1 HOH A 140 24.452 20.771 5.757 1.00 0.00 H -HETATM 433 H2 HOH A 140 25.343 21.534 6.714 1.00 0.00 H -HETATM 434 O HOH A 141 20.298 21.094 5.566 1.00 0.00 O -HETATM 435 H1 HOH A 141 19.958 21.572 6.322 1.00 0.00 H -HETATM 436 H2 HOH A 141 19.536 20.641 5.206 1.00 0.00 H -HETATM 437 O HOH A 142 28.473 19.990 7.613 1.00 0.00 O -HETATM 438 H1 HOH A 142 28.490 20.441 8.458 1.00 0.00 H -HETATM 439 H2 HOH A 142 28.224 19.090 7.827 1.00 0.00 H -HETATM 440 O HOH A 143 18.599 28.424 12.872 1.00 0.00 O -HETATM 441 H1 HOH A 143 18.215 27.784 13.470 1.00 0.00 H -HETATM 442 H2 HOH A 143 18.910 29.128 13.442 1.00 0.00 H -HETATM 443 O HOH A 144 24.749 25.272 8.353 1.00 0.00 O -HETATM 444 H1 HOH A 144 25.116 24.798 9.099 1.00 0.00 H -HETATM 445 H2 HOH A 144 24.559 26.146 8.694 1.00 0.00 H -HETATM 446 O HOH A 145 17.613 20.016 4.482 1.00 0.00 O -HETATM 447 H1 HOH A 145 17.328 19.652 5.320 1.00 0.00 H -HETATM 448 H2 HOH A 145 17.551 19.284 3.869 1.00 0.00 H -HETATM 449 O HOH A 146 22.539 24.313 10.671 1.00 0.00 O -HETATM 450 H1 HOH A 146 22.235 25.192 10.896 1.00 0.00 H -HETATM 451 H2 HOH A 146 23.493 24.373 10.707 1.00 0.00 H -HETATM 452 O HOH A 147 27.208 27.586 12.948 1.00 0.00 O -HETATM 453 H1 HOH A 147 27.141 26.666 12.693 1.00 0.00 H -HETATM 454 H2 HOH A 147 26.578 27.684 13.662 1.00 0.00 H -HETATM 455 O HOH A 148 21.111 28.187 4.906 1.00 0.00 O -HETATM 456 H1 HOH A 148 21.629 27.384 4.852 1.00 0.00 H -HETATM 457 H2 HOH A 148 20.659 28.125 5.748 1.00 0.00 H -HETATM 458 O HOH A 149 18.595 25.153 11.818 1.00 0.00 O -HETATM 459 H1 HOH A 149 18.237 25.818 12.406 1.00 0.00 H -HETATM 460 H2 HOH A 149 18.301 24.321 12.190 1.00 0.00 H -HETATM 461 O HOH A 150 21.796 25.612 14.702 1.00 0.00 O -HETATM 462 H1 HOH A 150 21.497 25.757 13.805 1.00 0.00 H -HETATM 463 H2 HOH A 150 22.568 25.052 14.610 1.00 0.00 H -HETATM 464 O HOH A 151 27.139 30.408 12.698 1.00 0.00 O -HETATM 465 H1 HOH A 151 27.154 29.477 12.480 1.00 0.00 H -HETATM 466 H2 HOH A 151 26.432 30.494 13.337 1.00 0.00 H -HETATM 467 O HOH A 152 28.880 28.775 5.543 1.00 0.00 O -HETATM 468 H1 HOH A 152 29.233 28.178 4.883 1.00 0.00 H -HETATM 469 H2 HOH A 152 27.997 28.450 5.714 1.00 0.00 H -HETATM 470 O HOH A 153 24.967 29.535 2.950 1.00 0.00 O -HETATM 471 H1 HOH A 153 25.654 30.082 3.331 1.00 0.00 H -HETATM 472 H2 HOH A 153 24.180 30.079 2.985 1.00 0.00 H -HETATM 473 O HOH A 154 24.269 26.540 2.563 1.00 0.00 O -HETATM 474 H1 HOH A 154 24.726 27.350 2.789 1.00 0.00 H -HETATM 475 H2 HOH A 154 23.918 26.222 3.395 1.00 0.00 H -HETATM 476 O HOH A 155 20.171 16.883 3.035 1.00 0.00 O -HETATM 477 H1 HOH A 155 20.042 16.875 3.983 1.00 0.00 H -HETATM 478 H2 HOH A 155 19.347 17.222 2.684 1.00 0.00 H -HETATM 479 O HOH A 156 27.846 30.053 8.510 1.00 0.00 O -HETATM 480 H1 HOH A 156 28.488 29.353 8.623 1.00 0.00 H -HETATM 481 H2 HOH A 156 28.371 30.833 8.329 1.00 0.00 H -HETATM 482 O HOH A 157 28.664 21.135 10.246 1.00 0.00 O -HETATM 483 H1 HOH A 157 29.032 20.314 10.574 1.00 0.00 H -HETATM 484 H2 HOH A 157 27.804 21.195 10.661 1.00 0.00 H -HETATM 485 O HOH A 158 23.999 22.369 2.470 1.00 0.00 O -HETATM 486 H1 HOH A 158 23.290 22.838 2.912 1.00 0.00 H -HETATM 487 H2 HOH A 158 24.283 21.711 3.105 1.00 0.00 H -HETATM 488 O HOH A 159 25.624 23.789 10.470 1.00 0.00 O -HETATM 489 H1 HOH A 159 26.123 24.263 11.135 1.00 0.00 H -HETATM 490 H2 HOH A 159 25.766 22.865 10.677 1.00 0.00 H -HETATM 491 O HOH A 160 28.030 19.094 3.910 1.00 0.00 O -HETATM 492 H1 HOH A 160 27.907 19.113 2.961 1.00 0.00 H -HETATM 493 H2 HOH A 160 28.979 19.142 4.030 1.00 0.00 H -HETATM 494 O HOH A 161 28.440 29.805 15.242 1.00 0.00 O -HETATM 495 H1 HOH A 161 27.833 29.828 14.501 1.00 0.00 H -HETATM 496 H2 HOH A 161 28.135 29.074 15.779 1.00 0.00 H -HETATM 497 O HOH A 162 17.323 26.185 14.238 1.00 0.00 O -HETATM 498 H1 HOH A 162 17.827 25.605 14.810 1.00 0.00 H -HETATM 499 H2 HOH A 162 16.584 26.469 14.776 1.00 0.00 H -HETATM 500 O HOH A 163 24.377 27.592 13.771 1.00 0.00 O -HETATM 501 H1 HOH A 163 23.611 28.160 13.687 1.00 0.00 H -HETATM 502 H2 HOH A 163 24.558 27.299 12.878 1.00 0.00 H -HETATM 503 O HOH A 164 19.355 24.328 15.133 1.00 0.00 O -HETATM 504 H1 HOH A 164 19.396 24.029 16.041 1.00 0.00 H -HETATM 505 H2 HOH A 164 20.210 24.728 14.974 1.00 0.00 H -HETATM 506 O HOH A 165 21.296 22.907 13.100 1.00 0.00 O -HETATM 507 H1 HOH A 165 20.765 22.416 12.473 1.00 0.00 H -HETATM 508 H2 HOH A 165 21.965 23.335 12.566 1.00 0.00 H -HETATM 509 O HOH A 166 30.194 27.374 12.864 1.00 0.00 O -HETATM 510 H1 HOH A 166 30.608 27.528 13.714 1.00 0.00 H -HETATM 511 H2 HOH A 166 29.259 27.499 13.027 1.00 0.00 H -HETATM 512 O HOH A 167 21.783 19.873 13.180 1.00 0.00 O -HETATM 513 H1 HOH A 167 21.689 19.255 12.455 1.00 0.00 H -HETATM 514 H2 HOH A 167 21.203 20.600 12.953 1.00 0.00 H -HETATM 515 O HOH A 168 24.549 18.430 10.213 1.00 0.00 O -HETATM 516 H1 HOH A 168 24.101 18.453 9.367 1.00 0.00 H -HETATM 517 H2 HOH A 168 23.916 18.032 10.810 1.00 0.00 H -HETATM 518 O HOH A 169 24.955 27.326 10.834 1.00 0.00 O -HETATM 519 H1 HOH A 169 25.374 28.169 10.662 1.00 0.00 H -HETATM 520 H2 HOH A 169 24.036 27.463 10.605 1.00 0.00 H -HETATM 521 O HOH A 170 27.292 25.057 12.218 1.00 0.00 O -HETATM 522 H1 HOH A 170 27.411 24.462 12.957 1.00 0.00 H -HETATM 523 H2 HOH A 170 28.151 25.094 11.798 1.00 0.00 H -HETATM 524 O HOH A 171 29.630 25.611 10.794 1.00 0.00 O -HETATM 525 H1 HOH A 171 29.104 26.135 10.191 1.00 0.00 H -HETATM 526 H2 HOH A 171 29.973 26.244 11.425 1.00 0.00 H -HETATM 527 O HOH A 172 24.058 21.600 13.475 1.00 0.00 O -HETATM 528 H1 HOH A 172 24.648 21.291 14.163 1.00 0.00 H -HETATM 529 H2 HOH A 172 23.240 21.128 13.631 1.00 0.00 H -HETATM 530 O HOH A 173 28.878 21.216 13.709 1.00 0.00 O -HETATM 531 H1 HOH A 173 28.189 20.554 13.644 1.00 0.00 H -HETATM 532 H2 HOH A 173 29.598 20.770 14.154 1.00 0.00 H -HETATM 533 O HOH A 174 21.661 30.525 3.172 1.00 0.00 O -HETATM 534 H1 HOH A 174 21.361 30.401 4.072 1.00 0.00 H -HETATM 535 H2 HOH A 174 21.555 29.665 2.764 1.00 0.00 H -HETATM 536 O HOH A 175 17.386 25.573 4.609 1.00 0.00 O -HETATM 537 H1 HOH A 175 16.731 25.304 3.965 1.00 0.00 H -HETATM 538 H2 HOH A 175 18.224 25.463 4.159 1.00 0.00 H -HETATM 539 O HOH A 176 18.424 25.958 9.149 1.00 0.00 O -HETATM 540 H1 HOH A 176 18.791 25.871 10.029 1.00 0.00 H -HETATM 541 H2 HOH A 176 17.855 25.195 9.050 1.00 0.00 H -HETATM 542 O HOH A 177 17.975 22.869 13.055 1.00 0.00 O -HETATM 543 H1 HOH A 177 17.081 22.836 13.394 1.00 0.00 H -HETATM 544 H2 HOH A 177 18.515 23.068 13.820 1.00 0.00 H -HETATM 545 O HOH A 178 18.479 17.144 7.403 1.00 0.00 O -HETATM 546 H1 HOH A 178 19.127 16.594 6.963 1.00 0.00 H -HETATM 547 H2 HOH A 178 18.900 17.398 8.225 1.00 0.00 H -HETATM 548 O HOH A 179 18.233 17.299 10.146 1.00 0.00 O -HETATM 549 H1 HOH A 179 17.884 17.756 10.912 1.00 0.00 H -HETATM 550 H2 HOH A 179 17.901 16.405 10.228 1.00 0.00 H -HETATM 551 O HOH A 180 25.745 18.491 13.668 1.00 0.00 O -HETATM 552 H1 HOH A 180 25.684 19.083 14.417 1.00 0.00 H -HETATM 553 H2 HOH A 180 26.685 18.383 13.523 1.00 0.00 H -HETATM 554 O HOH A 181 28.383 18.148 13.307 1.00 0.00 O -HETATM 555 H1 HOH A 181 28.997 18.465 12.645 1.00 0.00 H -HETATM 556 H2 HOH A 181 28.928 17.662 13.927 1.00 0.00 H -HETATM 557 O HOH A 182 29.123 16.711 9.634 1.00 0.00 O -HETATM 558 H1 HOH A 182 28.249 17.044 9.431 1.00 0.00 H -HETATM 559 H2 HOH A 182 29.014 16.238 10.459 1.00 0.00 H -HETATM 560 O HOH A 183 30.031 18.918 11.018 1.00 0.00 O -HETATM 561 H1 HOH A 183 29.702 18.103 10.638 1.00 0.00 H -HETATM 562 H2 HOH A 183 30.979 18.875 10.895 1.00 0.00 H -HETATM 563 O HOH A 184 26.871 17.628 8.573 1.00 0.00 O -HETATM 564 H1 HOH A 184 26.088 18.102 8.853 1.00 0.00 H -HETATM 565 H2 HOH A 184 26.577 16.723 8.465 1.00 0.00 H -HETATM 566 O HOH A 185 24.756 20.046 4.085 1.00 0.00 O -HETATM 567 H1 HOH A 185 23.944 19.672 3.745 1.00 0.00 H -HETATM 568 H2 HOH A 185 25.260 19.291 4.387 1.00 0.00 H -HETATM 569 O HOH A 186 29.259 16.711 5.323 1.00 0.00 O -HETATM 570 H1 HOH A 186 29.862 17.283 5.798 1.00 0.00 H -HETATM 571 H2 HOH A 186 28.518 17.275 5.101 1.00 0.00 H -HETATM 572 O HOH A 187 22.781 18.196 2.689 1.00 0.00 O -HETATM 573 H1 HOH A 187 22.151 17.495 2.856 1.00 0.00 H -HETATM 574 H2 HOH A 187 22.242 18.957 2.473 1.00 0.00 H -HETATM 575 O HOH A 188 22.907 17.475 15.125 1.00 0.00 O -HETATM 576 H1 HOH A 188 22.625 17.978 14.361 1.00 0.00 H -HETATM 577 H2 HOH A 188 23.289 16.677 14.759 1.00 0.00 H -HETATM 578 O HOH A 189 29.508 16.890 15.703 1.00 0.00 O -HETATM 579 H1 HOH A 189 29.395 17.210 16.598 1.00 0.00 H -HETATM 580 H2 HOH A 189 30.325 17.291 15.406 1.00 0.00 H -HETATM 581 O HOH A 190 28.414 6.135 23.615 1.00 0.00 O -HETATM 582 H1 HOH A 190 28.334 5.221 23.344 1.00 0.00 H -HETATM 583 H2 HOH A 190 28.001 6.632 22.909 1.00 0.00 H -HETATM 584 O HOH A 191 26.546 7.913 25.496 1.00 0.00 O -HETATM 585 H1 HOH A 191 25.770 7.433 25.786 1.00 0.00 H -HETATM 586 H2 HOH A 191 27.197 7.234 25.321 1.00 0.00 H -HETATM 587 O HOH A 192 20.563 8.225 26.373 1.00 0.00 O -HETATM 588 H1 HOH A 192 19.731 7.970 26.773 1.00 0.00 H -HETATM 589 H2 HOH A 192 21.171 8.296 27.109 1.00 0.00 H -HETATM 590 O HOH A 193 20.543 12.259 26.569 1.00 0.00 O -HETATM 591 H1 HOH A 193 20.845 11.369 26.390 1.00 0.00 H -HETATM 592 H2 HOH A 193 21.287 12.816 26.341 1.00 0.00 H -HETATM 593 O HOH A 194 18.972 3.185 20.158 1.00 0.00 O -HETATM 594 H1 HOH A 194 18.083 3.527 20.056 1.00 0.00 H -HETATM 595 H2 HOH A 194 19.256 2.985 19.266 1.00 0.00 H -HETATM 596 O HOH A 195 16.935 5.786 26.042 1.00 0.00 O -HETATM 597 H1 HOH A 195 17.507 5.018 26.042 1.00 0.00 H -HETATM 598 H2 HOH A 195 16.935 6.085 25.132 1.00 0.00 H -HETATM 599 O HOH A 196 26.793 14.605 23.896 1.00 0.00 O -HETATM 600 H1 HOH A 196 26.174 15.061 23.326 1.00 0.00 H -HETATM 601 H2 HOH A 196 27.648 14.760 23.495 1.00 0.00 H -HETATM 602 O HOH A 197 25.987 10.589 25.503 1.00 0.00 O -HETATM 603 H1 HOH A 197 25.918 9.648 25.342 1.00 0.00 H -HETATM 604 H2 HOH A 197 26.749 10.679 26.075 1.00 0.00 H -HETATM 605 O HOH A 198 27.017 3.396 25.730 1.00 0.00 O -HETATM 606 H1 HOH A 198 27.394 2.523 25.617 1.00 0.00 H -HETATM 607 H2 HOH A 198 26.919 3.732 24.839 1.00 0.00 H -HETATM 608 O HOH A 199 21.148 1.768 21.191 1.00 0.00 O -HETATM 609 H1 HOH A 199 21.255 2.669 21.498 1.00 0.00 H -HETATM 610 H2 HOH A 199 20.237 1.720 20.901 1.00 0.00 H -HETATM 611 O HOH A 200 18.796 3.690 26.437 1.00 0.00 O -HETATM 612 H1 HOH A 200 19.477 3.954 27.055 1.00 0.00 H -HETATM 613 H2 HOH A 200 18.481 2.850 26.771 1.00 0.00 H -HETATM 614 O HOH A 201 22.989 4.737 25.524 1.00 0.00 O -HETATM 615 H1 HOH A 201 23.496 5.235 26.165 1.00 0.00 H -HETATM 616 H2 HOH A 201 23.520 3.960 25.348 1.00 0.00 H -HETATM 617 O HOH A 202 27.659 9.489 21.289 1.00 0.00 O -HETATM 618 H1 HOH A 202 27.041 9.954 20.726 1.00 0.00 H -HETATM 619 H2 HOH A 202 28.172 10.181 21.706 1.00 0.00 H -HETATM 620 O HOH A 203 22.523 9.016 27.968 1.00 0.00 O -HETATM 621 H1 HOH A 203 22.189 9.643 28.610 1.00 0.00 H -HETATM 622 H2 HOH A 203 22.699 9.542 27.188 1.00 0.00 H -HETATM 623 O HOH A 204 21.734 10.984 29.783 1.00 0.00 O -HETATM 624 H1 HOH A 204 22.352 11.659 29.501 1.00 0.00 H -HETATM 625 H2 HOH A 204 20.874 11.393 29.691 1.00 0.00 H -HETATM 626 O HOH A 205 30.188 14.293 26.413 1.00 0.00 O -HETATM 627 H1 HOH A 205 30.201 13.889 25.545 1.00 0.00 H -HETATM 628 H2 HOH A 205 29.636 15.067 26.309 1.00 0.00 H -HETATM 629 O HOH A 206 29.587 9.196 27.741 1.00 0.00 O -HETATM 630 H1 HOH A 206 30.003 8.982 26.906 1.00 0.00 H -HETATM 631 H2 HOH A 206 30.311 9.453 28.312 1.00 0.00 H -HETATM 632 O HOH A 207 27.025 6.641 20.858 1.00 0.00 O -HETATM 633 H1 HOH A 207 26.098 6.575 21.087 1.00 0.00 H -HETATM 634 H2 HOH A 207 27.177 7.579 20.743 1.00 0.00 H -HETATM 635 O HOH A 208 27.012 2.913 17.855 1.00 0.00 O -HETATM 636 H1 HOH A 208 26.072 3.074 17.940 1.00 0.00 H -HETATM 637 H2 HOH A 208 27.330 3.631 17.308 1.00 0.00 H -HETATM 638 O HOH A 209 31.054 8.203 21.361 1.00 0.00 O -HETATM 639 H1 HOH A 209 30.436 7.865 20.714 1.00 0.00 H -HETATM 640 H2 HOH A 209 31.037 7.559 22.069 1.00 0.00 H -HETATM 641 O HOH A 210 30.497 4.381 28.778 1.00 0.00 O -HETATM 642 H1 HOH A 210 30.084 5.207 29.032 1.00 0.00 H -HETATM 643 H2 HOH A 210 29.765 3.796 28.586 1.00 0.00 H -HETATM 644 O HOH A 211 22.630 7.167 23.640 1.00 0.00 O -HETATM 645 H1 HOH A 211 22.226 6.455 23.144 1.00 0.00 H -HETATM 646 H2 HOH A 211 22.717 6.823 24.529 1.00 0.00 H -HETATM 647 O HOH A 212 23.098 10.854 25.804 1.00 0.00 O -HETATM 648 H1 HOH A 212 22.801 10.249 25.125 1.00 0.00 H -HETATM 649 H2 HOH A 212 24.048 10.892 25.693 1.00 0.00 H -HETATM 650 O HOH A 213 21.343 3.942 27.420 1.00 0.00 O -HETATM 651 H1 HOH A 213 21.895 4.051 26.645 1.00 0.00 H -HETATM 652 H2 HOH A 213 21.858 4.315 28.135 1.00 0.00 H -HETATM 653 O HOH A 214 29.231 7.442 18.369 1.00 0.00 O -HETATM 654 H1 HOH A 214 29.670 6.604 18.222 1.00 0.00 H -HETATM 655 H2 HOH A 214 29.944 8.075 18.455 1.00 0.00 H -HETATM 656 O HOH A 215 27.340 12.381 22.337 1.00 0.00 O -HETATM 657 H1 HOH A 215 27.780 13.124 21.922 1.00 0.00 H -HETATM 658 H2 HOH A 215 27.279 12.624 23.261 1.00 0.00 H -HETATM 659 O HOH A 216 19.331 6.062 21.140 1.00 0.00 O -HETATM 660 H1 HOH A 216 19.211 6.788 20.529 1.00 0.00 H -HETATM 661 H2 HOH A 216 19.021 5.292 20.663 1.00 0.00 H -HETATM 662 O HOH A 217 16.969 9.233 26.947 1.00 0.00 O -HETATM 663 H1 HOH A 217 17.047 9.368 26.003 1.00 0.00 H -HETATM 664 H2 HOH A 217 17.583 8.525 27.140 1.00 0.00 H -HETATM 665 O HOH A 218 18.214 10.933 23.358 1.00 0.00 O -HETATM 666 H1 HOH A 218 17.807 11.075 22.503 1.00 0.00 H -HETATM 667 H2 HOH A 218 19.105 10.649 23.155 1.00 0.00 H -HETATM 668 O HOH A 219 30.007 15.368 19.693 1.00 0.00 O -HETATM 669 H1 HOH A 219 29.848 15.078 20.591 1.00 0.00 H -HETATM 670 H2 HOH A 219 29.842 14.592 19.158 1.00 0.00 H -HETATM 671 O HOH A 220 22.486 15.148 21.470 1.00 0.00 O -HETATM 672 H1 HOH A 220 22.310 14.232 21.257 1.00 0.00 H -HETATM 673 H2 HOH A 220 21.632 15.507 21.710 1.00 0.00 H -HETATM 674 O HOH A 221 29.710 12.877 18.253 1.00 0.00 O -HETATM 675 H1 HOH A 221 29.017 12.875 17.593 1.00 0.00 H -HETATM 676 H2 HOH A 221 30.452 12.453 17.822 1.00 0.00 H -HETATM 677 O HOH A 222 29.275 14.503 22.328 1.00 0.00 O -HETATM 678 H1 HOH A 222 29.731 13.722 22.642 1.00 0.00 H -HETATM 679 H2 HOH A 222 29.614 15.214 22.872 1.00 0.00 H -HETATM 680 O HOH A 223 17.025 10.275 29.487 1.00 0.00 O -HETATM 681 H1 HOH A 223 17.188 9.805 28.669 1.00 0.00 H -HETATM 682 H2 HOH A 223 17.490 9.767 30.152 1.00 0.00 H -HETATM 683 O HOH A 224 21.589 4.529 22.251 1.00 0.00 O -HETATM 684 H1 HOH A 224 21.363 4.312 23.156 1.00 0.00 H -HETATM 685 H2 HOH A 224 20.808 4.962 21.906 1.00 0.00 H -HETATM 686 O HOH A 225 28.818 4.535 20.850 1.00 0.00 O -HETATM 687 H1 HOH A 225 28.219 5.259 20.666 1.00 0.00 H -HETATM 688 H2 HOH A 225 29.366 4.473 20.068 1.00 0.00 H -HETATM 689 O HOH A 226 27.425 3.171 22.880 1.00 0.00 O -HETATM 690 H1 HOH A 226 27.818 3.489 22.067 1.00 0.00 H -HETATM 691 H2 HOH A 226 27.787 2.293 22.995 1.00 0.00 H -HETATM 692 O HOH A 227 16.648 3.704 16.314 1.00 0.00 O -HETATM 693 H1 HOH A 227 16.566 4.647 16.455 1.00 0.00 H -HETATM 694 H2 HOH A 227 16.297 3.561 15.435 1.00 0.00 H -HETATM 695 O HOH A 228 28.010 5.762 26.975 1.00 0.00 O -HETATM 696 H1 HOH A 228 27.278 6.271 27.324 1.00 0.00 H -HETATM 697 H2 HOH A 228 27.613 4.945 26.674 1.00 0.00 H -HETATM 698 O HOH A 229 24.448 2.437 25.381 1.00 0.00 O -HETATM 699 H1 HOH A 229 24.452 1.996 24.531 1.00 0.00 H -HETATM 700 H2 HOH A 229 25.343 2.759 25.488 1.00 0.00 H -HETATM 701 O HOH A 230 20.298 2.320 24.340 1.00 0.00 O -HETATM 702 H1 HOH A 230 19.958 2.798 25.097 1.00 0.00 H -HETATM 703 H2 HOH A 230 19.536 1.867 23.980 1.00 0.00 H -HETATM 704 O HOH A 231 24.510 3.439 18.371 1.00 0.00 O -HETATM 705 H1 HOH A 231 24.631 3.397 19.320 1.00 0.00 H -HETATM 706 H2 HOH A 231 24.125 4.301 18.216 1.00 0.00 H -HETATM 707 O HOH A 232 23.522 5.749 17.770 1.00 0.00 O -HETATM 708 H1 HOH A 232 22.954 5.301 17.143 1.00 0.00 H -HETATM 709 H2 HOH A 232 24.231 6.108 17.236 1.00 0.00 H -HETATM 710 O HOH A 233 24.749 6.498 27.127 1.00 0.00 O -HETATM 711 H1 HOH A 233 25.116 6.023 27.873 1.00 0.00 H -HETATM 712 H2 HOH A 233 24.559 7.372 27.468 1.00 0.00 H -HETATM 713 O HOH A 234 22.539 5.538 29.446 1.00 0.00 O -HETATM 714 H1 HOH A 234 22.235 6.418 29.671 1.00 0.00 H -HETATM 715 H2 HOH A 234 23.493 5.598 29.481 1.00 0.00 H -HETATM 716 O HOH A 235 21.067 9.745 20.042 1.00 0.00 O -HETATM 717 H1 HOH A 235 20.293 9.204 19.882 1.00 0.00 H -HETATM 718 H2 HOH A 235 21.796 9.225 19.704 1.00 0.00 H -HETATM 719 O HOH A 236 30.002 4.507 18.274 1.00 0.00 O -HETATM 720 H1 HOH A 236 30.890 4.819 18.099 1.00 0.00 H -HETATM 721 H2 HOH A 236 29.972 3.634 17.882 1.00 0.00 H -HETATM 722 O HOH A 237 21.111 9.413 23.680 1.00 0.00 O -HETATM 723 H1 HOH A 237 21.629 8.609 23.626 1.00 0.00 H -HETATM 724 H2 HOH A 237 20.659 9.351 24.522 1.00 0.00 H -HETATM 725 O HOH A 238 25.998 10.679 18.953 1.00 0.00 O -HETATM 726 H1 HOH A 238 26.339 11.423 18.457 1.00 0.00 H -HETATM 727 H2 HOH A 238 25.169 10.992 19.315 1.00 0.00 H -HETATM 728 O HOH A 239 28.880 10.001 24.318 1.00 0.00 O -HETATM 729 H1 HOH A 239 29.233 9.404 23.658 1.00 0.00 H -HETATM 730 H2 HOH A 239 27.997 9.675 24.488 1.00 0.00 H -HETATM 731 O HOH A 240 24.967 10.761 21.725 1.00 0.00 O -HETATM 732 H1 HOH A 240 25.654 11.308 22.105 1.00 0.00 H -HETATM 733 H2 HOH A 240 24.180 11.305 21.760 1.00 0.00 H -HETATM 734 O HOH A 241 17.106 6.378 17.216 1.00 0.00 O -HETATM 735 H1 HOH A 241 17.975 6.660 17.500 1.00 0.00 H -HETATM 736 H2 HOH A 241 16.615 7.191 17.101 1.00 0.00 H -HETATM 737 O HOH A 242 24.269 7.765 21.337 1.00 0.00 O -HETATM 738 H1 HOH A 242 24.726 8.576 21.563 1.00 0.00 H -HETATM 739 H2 HOH A 242 23.918 7.447 22.169 1.00 0.00 H -HETATM 740 O HOH A 243 26.573 13.276 28.566 1.00 0.00 O -HETATM 741 H1 HOH A 243 27.217 13.482 29.244 1.00 0.00 H -HETATM 742 H2 HOH A 243 26.936 12.515 28.113 1.00 0.00 H -HETATM 743 O HOH A 244 27.846 11.279 27.284 1.00 0.00 O -HETATM 744 H1 HOH A 244 28.488 10.578 27.397 1.00 0.00 H -HETATM 745 H2 HOH A 244 28.371 12.059 27.104 1.00 0.00 H -HETATM 746 O HOH A 245 23.490 12.974 18.600 1.00 0.00 O -HETATM 747 H1 HOH A 245 23.481 13.707 17.984 1.00 0.00 H -HETATM 748 H2 HOH A 245 22.570 12.727 18.692 1.00 0.00 H -HETATM 749 O HOH A 246 19.091 8.195 19.344 1.00 0.00 O -HETATM 750 H1 HOH A 246 18.483 8.935 19.354 1.00 0.00 H -HETATM 751 H2 HOH A 246 19.566 8.285 18.518 1.00 0.00 H -HETATM 752 O HOH A 247 28.664 2.360 29.020 1.00 0.00 O -HETATM 753 H1 HOH A 247 29.032 1.540 29.348 1.00 0.00 H -HETATM 754 H2 HOH A 247 27.804 2.420 29.436 1.00 0.00 H -HETATM 755 O HOH A 248 26.476 13.037 17.262 1.00 0.00 O -HETATM 756 H1 HOH A 248 26.577 12.833 16.333 1.00 0.00 H -HETATM 757 H2 HOH A 248 25.576 12.782 17.467 1.00 0.00 H -HETATM 758 O HOH A 249 23.999 3.595 21.245 1.00 0.00 O -HETATM 759 H1 HOH A 249 23.290 4.063 21.686 1.00 0.00 H -HETATM 760 H2 HOH A 249 24.283 2.937 21.879 1.00 0.00 H -HETATM 761 O HOH A 250 25.624 5.014 29.244 1.00 0.00 O -HETATM 762 H1 HOH A 250 26.123 5.489 29.909 1.00 0.00 H -HETATM 763 H2 HOH A 250 25.766 4.091 29.451 1.00 0.00 H -HETATM 764 O HOH A 251 25.118 15.555 21.957 1.00 0.00 O -HETATM 765 H1 HOH A 251 25.372 15.517 21.035 1.00 0.00 H -HETATM 766 H2 HOH A 251 24.169 15.429 21.950 1.00 0.00 H -HETATM 767 O HOH A 252 22.202 1.903 18.620 1.00 0.00 O -HETATM 768 H1 HOH A 252 23.051 2.340 18.554 1.00 0.00 H -HETATM 769 H2 HOH A 252 21.835 2.215 19.447 1.00 0.00 H -HETATM 770 O HOH A 253 21.101 8.156 17.093 1.00 0.00 O -HETATM 771 H1 HOH A 253 21.867 8.044 17.656 1.00 0.00 H -HETATM 772 H2 HOH A 253 21.179 7.460 16.441 1.00 0.00 H -HETATM 773 O HOH A 254 19.796 5.589 17.777 1.00 0.00 O -HETATM 774 H1 HOH A 254 19.876 4.642 17.888 1.00 0.00 H -HETATM 775 H2 HOH A 254 20.688 5.920 17.883 1.00 0.00 H -HETATM 776 O HOH A 255 20.597 15.738 24.880 1.00 0.00 O -HETATM 777 H1 HOH A 255 21.334 15.190 25.151 1.00 0.00 H -HETATM 778 H2 HOH A 255 20.981 16.604 24.741 1.00 0.00 H -HETATM 779 O HOH A 256 17.482 11.806 20.754 1.00 0.00 O -HETATM 780 H1 HOH A 256 16.556 12.048 20.745 1.00 0.00 H -HETATM 781 H2 HOH A 256 17.947 12.633 20.633 1.00 0.00 H -HETATM 782 O HOH A 257 23.708 14.911 16.703 1.00 0.00 O -HETATM 783 H1 HOH A 257 24.500 15.200 16.251 1.00 0.00 H -HETATM 784 H2 HOH A 257 23.188 14.481 16.024 1.00 0.00 H -HETATM 785 O HOH A 258 24.225 10.132 16.567 1.00 0.00 O -HETATM 786 H1 HOH A 258 24.120 9.517 17.293 1.00 0.00 H -HETATM 787 H2 HOH A 258 24.058 9.608 15.783 1.00 0.00 H -HETATM 788 O HOH A 259 27.466 9.194 17.171 1.00 0.00 O -HETATM 789 H1 HOH A 259 26.917 9.641 17.815 1.00 0.00 H -HETATM 790 H2 HOH A 259 28.087 8.689 17.695 1.00 0.00 H -HETATM 791 O HOH A 260 23.133 8.153 19.068 1.00 0.00 O -HETATM 792 H1 HOH A 260 23.555 7.987 19.911 1.00 0.00 H -HETATM 793 H2 HOH A 260 23.258 7.343 18.573 1.00 0.00 H -HETATM 794 O HOH A 261 25.646 7.177 16.315 1.00 0.00 O -HETATM 795 H1 HOH A 261 26.166 6.462 15.949 1.00 0.00 H -HETATM 796 H2 HOH A 261 26.293 7.815 16.615 1.00 0.00 H -HETATM 797 O HOH A 262 24.955 8.551 29.608 1.00 0.00 O -HETATM 798 H1 HOH A 262 25.374 9.395 29.436 1.00 0.00 H -HETATM 799 H2 HOH A 262 24.036 8.689 29.379 1.00 0.00 H -HETATM 800 O HOH A 263 29.630 6.837 29.568 1.00 0.00 O -HETATM 801 H1 HOH A 263 29.104 7.361 28.965 1.00 0.00 H -HETATM 802 H2 HOH A 263 29.973 7.470 30.199 1.00 0.00 H -HETATM 803 O HOH A 264 22.029 4.226 16.013 1.00 0.00 O -HETATM 804 H1 HOH A 264 21.828 3.363 16.375 1.00 0.00 H -HETATM 805 H2 HOH A 264 21.858 4.139 15.076 1.00 0.00 H -HETATM 806 O HOH A 265 26.211 15.258 18.605 1.00 0.00 O -HETATM 807 H1 HOH A 265 27.106 15.596 18.627 1.00 0.00 H -HETATM 808 H2 HOH A 265 26.242 14.536 17.978 1.00 0.00 H -HETATM 809 O HOH A 266 19.850 10.630 16.834 1.00 0.00 O -HETATM 810 H1 HOH A 266 20.288 11.173 17.490 1.00 0.00 H -HETATM 811 H2 HOH A 266 20.335 9.805 16.844 1.00 0.00 H -HETATM 812 O HOH A 267 17.065 13.419 24.286 1.00 0.00 O -HETATM 813 H1 HOH A 267 17.395 12.551 24.054 1.00 0.00 H -HETATM 814 H2 HOH A 267 17.494 13.625 25.117 1.00 0.00 H -HETATM 815 O HOH A 268 21.661 11.750 21.946 1.00 0.00 O -HETATM 816 H1 HOH A 268 21.361 11.627 22.847 1.00 0.00 H -HETATM 817 H2 HOH A 268 21.555 10.891 21.538 1.00 0.00 H -HETATM 818 O HOH A 269 17.554 14.286 27.024 1.00 0.00 O -HETATM 819 H1 HOH A 269 17.117 14.467 27.857 1.00 0.00 H -HETATM 820 H2 HOH A 269 18.122 15.044 26.883 1.00 0.00 H -HETATM 821 O HOH A 270 17.386 6.798 23.383 1.00 0.00 O -HETATM 822 H1 HOH A 270 16.731 6.530 22.739 1.00 0.00 H -HETATM 823 H2 HOH A 270 18.224 6.689 22.933 1.00 0.00 H -HETATM 824 O HOH A 271 18.424 7.184 27.924 1.00 0.00 O -HETATM 825 H1 HOH A 271 18.791 7.096 28.803 1.00 0.00 H -HETATM 826 H2 HOH A 271 17.855 6.420 27.824 1.00 0.00 H -HETATM 827 O HOH A 272 16.600 4.008 19.326 1.00 0.00 O -HETATM 828 H1 HOH A 272 15.697 4.271 19.151 1.00 0.00 H -HETATM 829 H2 HOH A 272 17.084 4.279 18.546 1.00 0.00 H -HETATM 830 O HOH A 273 19.143 3.065 17.235 1.00 0.00 O -HETATM 831 H1 HOH A 273 19.852 2.643 16.750 1.00 0.00 H -HETATM 832 H2 HOH A 273 18.427 3.132 16.604 1.00 0.00 H -HETATM 833 O HOH A 274 23.540 13.253 28.687 1.00 0.00 O -HETATM 834 H1 HOH A 274 23.299 13.520 27.800 1.00 0.00 H -HETATM 835 H2 HOH A 274 24.480 13.424 28.742 1.00 0.00 H -HETATM 836 O HOH A 275 19.309 12.009 29.156 1.00 0.00 O -HETATM 837 H1 HOH A 275 18.583 11.390 29.089 1.00 0.00 H -HETATM 838 H2 HOH A 275 19.370 12.403 28.286 1.00 0.00 H -HETATM 839 O HOH A 276 22.914 14.224 25.941 1.00 0.00 O -HETATM 840 H1 HOH A 276 23.430 13.612 25.416 1.00 0.00 H -HETATM 841 H2 HOH A 276 23.563 14.726 26.432 1.00 0.00 H -HETATM 842 O HOH A 277 25.653 15.114 26.768 1.00 0.00 O -HETATM 843 H1 HOH A 277 25.941 14.860 25.891 1.00 0.00 H -HETATM 844 H2 HOH A 277 26.166 14.562 27.359 1.00 0.00 H -HETATM 845 O HOH A 278 17.592 15.326 22.366 1.00 0.00 O -HETATM 846 H1 HOH A 278 17.424 14.694 23.064 1.00 0.00 H -HETATM 847 H2 HOH A 278 16.726 15.532 22.015 1.00 0.00 H -HETATM 848 O HOH A 279 19.198 14.020 19.811 1.00 0.00 O -HETATM 849 H1 HOH A 279 18.673 14.401 19.107 1.00 0.00 H -HETATM 850 H2 HOH A 279 19.123 14.645 20.532 1.00 0.00 H -HETATM 851 O HOH A 280 21.798 15.968 18.686 1.00 0.00 O -HETATM 852 H1 HOH A 280 22.530 15.684 18.138 1.00 0.00 H -HETATM 853 H2 HOH A 280 22.057 15.729 19.576 1.00 0.00 H -HETATM 854 O HOH A 281 20.959 12.085 18.690 1.00 0.00 O -HETATM 855 H1 HOH A 281 20.330 12.553 19.239 1.00 0.00 H -HETATM 856 H2 HOH A 281 21.074 11.239 19.125 1.00 0.00 H -HETATM 857 O HOH A 282 28.414 6.135 4.841 1.00 0.00 O -HETATM 858 H1 HOH A 282 28.334 5.221 4.570 1.00 0.00 H -HETATM 859 H2 HOH A 282 28.001 6.632 4.135 1.00 0.00 H -HETATM 860 O HOH A 283 26.546 7.913 6.721 1.00 0.00 O -HETATM 861 H1 HOH A 283 25.770 7.433 7.011 1.00 0.00 H -HETATM 862 H2 HOH A 283 27.197 7.234 6.547 1.00 0.00 H -HETATM 863 O HOH A 284 20.563 8.225 7.599 1.00 0.00 O -HETATM 864 H1 HOH A 284 19.731 7.970 7.999 1.00 0.00 H -HETATM 865 H2 HOH A 284 21.171 8.296 8.335 1.00 0.00 H -HETATM 866 O HOH A 285 20.543 12.259 7.795 1.00 0.00 O -HETATM 867 H1 HOH A 285 20.845 11.369 7.616 1.00 0.00 H -HETATM 868 H2 HOH A 285 21.287 12.816 7.567 1.00 0.00 H -HETATM 869 O HOH A 286 16.935 5.786 7.267 1.00 0.00 O -HETATM 870 H1 HOH A 286 17.507 5.018 7.268 1.00 0.00 H -HETATM 871 H2 HOH A 286 16.935 6.085 6.358 1.00 0.00 H -HETATM 872 O HOH A 287 26.793 14.605 5.122 1.00 0.00 O -HETATM 873 H1 HOH A 287 26.174 15.061 4.551 1.00 0.00 H -HETATM 874 H2 HOH A 287 27.648 14.760 4.721 1.00 0.00 H -HETATM 875 O HOH A 288 25.987 10.589 6.728 1.00 0.00 O -HETATM 876 H1 HOH A 288 25.918 9.648 6.567 1.00 0.00 H -HETATM 877 H2 HOH A 288 26.749 10.679 7.301 1.00 0.00 H -HETATM 878 O HOH A 289 27.017 3.396 6.955 1.00 0.00 O -HETATM 879 H1 HOH A 289 27.394 2.523 6.843 1.00 0.00 H -HETATM 880 H2 HOH A 289 26.919 3.732 6.064 1.00 0.00 H -HETATM 881 O HOH A 290 21.148 1.768 2.417 1.00 0.00 O -HETATM 882 H1 HOH A 290 21.255 2.669 2.724 1.00 0.00 H -HETATM 883 H2 HOH A 290 20.237 1.720 2.127 1.00 0.00 H -HETATM 884 O HOH A 291 18.796 3.690 7.662 1.00 0.00 O -HETATM 885 H1 HOH A 291 19.477 3.954 8.281 1.00 0.00 H -HETATM 886 H2 HOH A 291 18.481 2.850 7.996 1.00 0.00 H -HETATM 887 O HOH A 292 22.989 4.737 6.750 1.00 0.00 O -HETATM 888 H1 HOH A 292 23.496 5.235 7.390 1.00 0.00 H -HETATM 889 H2 HOH A 292 23.520 3.960 6.574 1.00 0.00 H -HETATM 890 O HOH A 293 27.659 9.489 2.515 1.00 0.00 O -HETATM 891 H1 HOH A 293 27.041 9.954 1.951 1.00 0.00 H -HETATM 892 H2 HOH A 293 28.172 10.181 2.932 1.00 0.00 H -HETATM 893 O HOH A 294 22.523 9.016 9.193 1.00 0.00 O -HETATM 894 H1 HOH A 294 22.189 9.643 9.835 1.00 0.00 H -HETATM 895 H2 HOH A 294 22.699 9.542 8.414 1.00 0.00 H -HETATM 896 O HOH A 295 21.734 10.984 11.008 1.00 0.00 O -HETATM 897 H1 HOH A 295 22.352 11.659 10.727 1.00 0.00 H -HETATM 898 H2 HOH A 295 20.874 11.393 10.917 1.00 0.00 H -HETATM 899 O HOH A 296 30.188 14.293 7.638 1.00 0.00 O -HETATM 900 H1 HOH A 296 30.201 13.889 6.770 1.00 0.00 H -HETATM 901 H2 HOH A 296 29.636 15.067 7.534 1.00 0.00 H -HETATM 902 O HOH A 297 29.587 9.196 8.967 1.00 0.00 O -HETATM 903 H1 HOH A 297 30.003 8.982 8.132 1.00 0.00 H -HETATM 904 H2 HOH A 297 30.311 9.453 9.537 1.00 0.00 H -HETATM 905 O HOH A 298 27.025 6.641 2.084 1.00 0.00 O -HETATM 906 H1 HOH A 298 26.098 6.575 2.312 1.00 0.00 H -HETATM 907 H2 HOH A 298 27.177 7.579 1.969 1.00 0.00 H -HETATM 908 O HOH A 299 31.054 8.203 2.587 1.00 0.00 O -HETATM 909 H1 HOH A 299 30.436 7.865 1.940 1.00 0.00 H -HETATM 910 H2 HOH A 299 31.037 7.559 3.295 1.00 0.00 H -HETATM 911 O HOH A 300 30.497 4.381 10.004 1.00 0.00 O -HETATM 912 H1 HOH A 300 30.084 5.207 10.258 1.00 0.00 H -HETATM 913 H2 HOH A 300 29.765 3.796 9.811 1.00 0.00 H -HETATM 914 O HOH A 301 22.630 7.167 4.865 1.00 0.00 O -HETATM 915 H1 HOH A 301 22.226 6.455 4.370 1.00 0.00 H -HETATM 916 H2 HOH A 301 22.717 6.823 5.754 1.00 0.00 H -HETATM 917 O HOH A 302 23.098 10.854 7.029 1.00 0.00 O -HETATM 918 H1 HOH A 302 22.801 10.249 6.350 1.00 0.00 H -HETATM 919 H2 HOH A 302 24.048 10.892 6.918 1.00 0.00 H -HETATM 920 O HOH A 303 21.343 3.942 8.645 1.00 0.00 O -HETATM 921 H1 HOH A 303 21.895 4.051 7.871 1.00 0.00 H -HETATM 922 H2 HOH A 303 21.858 4.315 9.361 1.00 0.00 H -HETATM 923 O HOH A 304 22.190 10.592 13.680 1.00 0.00 O -HETATM 924 H1 HOH A 304 21.293 10.816 13.928 1.00 0.00 H -HETATM 925 H2 HOH A 304 22.216 10.716 12.731 1.00 0.00 H -HETATM 926 O HOH A 305 21.017 7.464 12.256 1.00 0.00 O -HETATM 927 H1 HOH A 305 20.878 8.336 12.625 1.00 0.00 H -HETATM 928 H2 HOH A 305 20.136 7.121 12.111 1.00 0.00 H -HETATM 929 O HOH A 306 27.340 12.381 3.562 1.00 0.00 O -HETATM 930 H1 HOH A 306 27.780 13.124 3.148 1.00 0.00 H -HETATM 931 H2 HOH A 306 27.279 12.624 4.486 1.00 0.00 H -HETATM 932 O HOH A 307 22.815 13.406 14.464 1.00 0.00 O -HETATM 933 H1 HOH A 307 22.787 13.810 13.597 1.00 0.00 H -HETATM 934 H2 HOH A 307 22.652 12.477 14.302 1.00 0.00 H -HETATM 935 O HOH A 308 19.331 6.062 2.366 1.00 0.00 O -HETATM 936 H1 HOH A 308 19.211 6.788 1.754 1.00 0.00 H -HETATM 937 H2 HOH A 308 19.021 5.292 1.889 1.00 0.00 H -HETATM 938 O HOH A 309 16.969 9.233 8.173 1.00 0.00 O -HETATM 939 H1 HOH A 309 17.047 9.368 7.229 1.00 0.00 H -HETATM 940 H2 HOH A 309 17.583 8.525 8.366 1.00 0.00 H -HETATM 941 O HOH A 310 18.214 10.933 4.584 1.00 0.00 O -HETATM 942 H1 HOH A 310 17.807 11.075 3.729 1.00 0.00 H -HETATM 943 H2 HOH A 310 19.105 10.649 4.381 1.00 0.00 H -HETATM 944 O HOH A 311 28.032 15.083 11.490 1.00 0.00 O -HETATM 945 H1 HOH A 311 28.546 14.993 12.293 1.00 0.00 H -HETATM 946 H2 HOH A 311 27.189 15.429 11.783 1.00 0.00 H -HETATM 947 O HOH A 312 22.486 15.148 2.696 1.00 0.00 O -HETATM 948 H1 HOH A 312 22.310 14.232 2.483 1.00 0.00 H -HETATM 949 H2 HOH A 312 21.632 15.507 2.936 1.00 0.00 H -HETATM 950 O HOH A 313 29.275 14.503 3.553 1.00 0.00 O -HETATM 951 H1 HOH A 313 29.731 13.722 3.867 1.00 0.00 H -HETATM 952 H2 HOH A 313 29.614 15.214 4.098 1.00 0.00 H -HETATM 953 O HOH A 314 17.025 10.275 10.712 1.00 0.00 O -HETATM 954 H1 HOH A 314 17.188 9.805 9.894 1.00 0.00 H -HETATM 955 H2 HOH A 314 17.490 9.767 11.377 1.00 0.00 H -HETATM 956 O HOH A 315 31.085 3.493 12.482 1.00 0.00 O -HETATM 957 H1 HOH A 315 30.234 3.194 12.803 1.00 0.00 H -HETATM 958 H2 HOH A 315 30.925 3.737 11.570 1.00 0.00 H -HETATM 959 O HOH A 316 28.180 4.993 14.582 1.00 0.00 O -HETATM 960 H1 HOH A 316 28.505 4.160 14.242 1.00 0.00 H -HETATM 961 H2 HOH A 316 28.968 5.516 14.729 1.00 0.00 H -HETATM 962 O HOH A 317 21.589 4.529 3.477 1.00 0.00 O -HETATM 963 H1 HOH A 317 21.363 4.312 4.381 1.00 0.00 H -HETATM 964 H2 HOH A 317 20.808 4.962 3.131 1.00 0.00 H -HETATM 965 O HOH A 318 28.818 4.535 2.076 1.00 0.00 O -HETATM 966 H1 HOH A 318 28.219 5.259 1.892 1.00 0.00 H -HETATM 967 H2 HOH A 318 29.366 4.473 1.293 1.00 0.00 H -HETATM 968 O HOH A 319 24.028 5.427 14.143 1.00 0.00 O -HETATM 969 H1 HOH A 319 23.933 4.487 13.993 1.00 0.00 H -HETATM 970 H2 HOH A 319 24.872 5.649 13.747 1.00 0.00 H -HETATM 971 O HOH A 320 27.425 3.171 4.106 1.00 0.00 O -HETATM 972 H1 HOH A 320 27.818 3.489 3.293 1.00 0.00 H -HETATM 973 H2 HOH A 320 27.787 2.293 4.220 1.00 0.00 H -HETATM 974 O HOH A 321 25.734 1.922 15.366 1.00 0.00 O -HETATM 975 H1 HOH A 321 25.044 1.729 16.000 1.00 0.00 H -HETATM 976 H2 HOH A 321 26.477 2.206 15.898 1.00 0.00 H -HETATM 977 O HOH A 322 28.010 5.762 8.201 1.00 0.00 O -HETATM 978 H1 HOH A 322 27.278 6.271 8.550 1.00 0.00 H -HETATM 979 H2 HOH A 322 27.613 4.945 7.900 1.00 0.00 H -HETATM 980 O HOH A 323 24.448 2.437 6.606 1.00 0.00 O -HETATM 981 H1 HOH A 323 24.452 1.996 5.757 1.00 0.00 H -HETATM 982 H2 HOH A 323 25.343 2.759 6.714 1.00 0.00 H -HETATM 983 O HOH A 324 20.298 2.320 5.566 1.00 0.00 O -HETATM 984 H1 HOH A 324 19.958 2.798 6.322 1.00 0.00 H -HETATM 985 H2 HOH A 324 19.536 1.867 5.206 1.00 0.00 H -HETATM 986 O HOH A 325 18.599 9.650 12.872 1.00 0.00 O -HETATM 987 H1 HOH A 325 18.215 9.009 13.470 1.00 0.00 H -HETATM 988 H2 HOH A 325 18.910 10.354 13.442 1.00 0.00 H -HETATM 989 O HOH A 326 24.749 6.498 8.353 1.00 0.00 O -HETATM 990 H1 HOH A 326 25.116 6.023 9.099 1.00 0.00 H -HETATM 991 H2 HOH A 326 24.559 7.372 8.694 1.00 0.00 H -HETATM 992 O HOH A 327 22.539 5.538 10.671 1.00 0.00 O -HETATM 993 H1 HOH A 327 22.235 6.418 10.896 1.00 0.00 H -HETATM 994 H2 HOH A 327 23.493 5.598 10.707 1.00 0.00 H -HETATM 995 O HOH A 328 27.208 8.812 12.948 1.00 0.00 O -HETATM 996 H1 HOH A 328 27.141 7.892 12.693 1.00 0.00 H -HETATM 997 H2 HOH A 328 26.578 8.910 13.662 1.00 0.00 H -HETATM 998 O HOH A 329 21.111 9.413 4.906 1.00 0.00 O -HETATM 999 H1 HOH A 329 21.629 8.609 4.852 1.00 0.00 H -HETATM 1000 H2 HOH A 329 20.659 9.351 5.748 1.00 0.00 H -HETATM 1001 O HOH A 330 18.595 6.379 11.818 1.00 0.00 O -HETATM 1002 H1 HOH A 330 18.237 7.044 12.406 1.00 0.00 H -HETATM 1003 H2 HOH A 330 18.301 5.547 12.190 1.00 0.00 H -HETATM 1004 O HOH A 331 21.796 6.837 14.702 1.00 0.00 O -HETATM 1005 H1 HOH A 331 21.497 6.983 13.805 1.00 0.00 H -HETATM 1006 H2 HOH A 331 22.568 6.278 14.610 1.00 0.00 H -HETATM 1007 O HOH A 332 27.139 11.634 12.698 1.00 0.00 O -HETATM 1008 H1 HOH A 332 27.154 10.702 12.480 1.00 0.00 H -HETATM 1009 H2 HOH A 332 26.432 11.720 13.337 1.00 0.00 H -HETATM 1010 O HOH A 333 28.880 10.001 5.543 1.00 0.00 O -HETATM 1011 H1 HOH A 333 29.233 9.404 4.883 1.00 0.00 H -HETATM 1012 H2 HOH A 333 27.997 9.675 5.714 1.00 0.00 H -HETATM 1013 O HOH A 334 24.967 10.761 2.950 1.00 0.00 O -HETATM 1014 H1 HOH A 334 25.654 11.308 3.331 1.00 0.00 H -HETATM 1015 H2 HOH A 334 24.180 11.305 2.985 1.00 0.00 H -HETATM 1016 O HOH A 335 24.269 7.765 2.563 1.00 0.00 O -HETATM 1017 H1 HOH A 335 24.726 8.576 2.789 1.00 0.00 H -HETATM 1018 H2 HOH A 335 23.918 7.447 3.395 1.00 0.00 H -HETATM 1019 O HOH A 336 26.573 13.276 9.792 1.00 0.00 O -HETATM 1020 H1 HOH A 336 27.217 13.482 10.469 1.00 0.00 H -HETATM 1021 H2 HOH A 336 26.936 12.515 9.339 1.00 0.00 H -HETATM 1022 O HOH A 337 27.846 11.279 8.510 1.00 0.00 O -HETATM 1023 H1 HOH A 337 28.488 10.578 8.623 1.00 0.00 H -HETATM 1024 H2 HOH A 337 28.371 12.059 8.329 1.00 0.00 H -HETATM 1025 O HOH A 338 29.620 12.079 11.713 1.00 0.00 O -HETATM 1026 H1 HOH A 338 29.955 12.665 12.391 1.00 0.00 H -HETATM 1027 H2 HOH A 338 28.700 11.948 11.943 1.00 0.00 H -HETATM 1028 O HOH A 339 25.449 12.128 14.882 1.00 0.00 O -HETATM 1029 H1 HOH A 339 25.128 11.409 15.427 1.00 0.00 H -HETATM 1030 H2 HOH A 339 24.774 12.803 14.956 1.00 0.00 H -HETATM 1031 O HOH A 340 28.664 2.360 10.246 1.00 0.00 O -HETATM 1032 H1 HOH A 340 29.032 1.540 10.574 1.00 0.00 H -HETATM 1033 H2 HOH A 340 27.804 2.420 10.661 1.00 0.00 H -HETATM 1034 O HOH A 341 23.999 3.595 2.470 1.00 0.00 O -HETATM 1035 H1 HOH A 341 23.290 4.063 2.912 1.00 0.00 H -HETATM 1036 H2 HOH A 341 24.283 2.937 3.105 1.00 0.00 H -HETATM 1037 O HOH A 342 25.624 5.014 10.470 1.00 0.00 O -HETATM 1038 H1 HOH A 342 26.123 5.489 11.135 1.00 0.00 H -HETATM 1039 H2 HOH A 342 25.766 4.091 10.677 1.00 0.00 H -HETATM 1040 O HOH A 343 25.118 15.555 3.183 1.00 0.00 O -HETATM 1041 H1 HOH A 343 25.372 15.517 2.261 1.00 0.00 H -HETATM 1042 H2 HOH A 343 24.169 15.429 3.176 1.00 0.00 H -HETATM 1043 O HOH A 344 20.597 15.738 6.106 1.00 0.00 O -HETATM 1044 H1 HOH A 344 21.334 15.190 6.377 1.00 0.00 H -HETATM 1045 H2 HOH A 344 20.981 16.604 5.966 1.00 0.00 H -HETATM 1046 O HOH A 345 17.482 11.806 1.980 1.00 0.00 O -HETATM 1047 H1 HOH A 345 16.556 12.048 1.970 1.00 0.00 H -HETATM 1048 H2 HOH A 345 17.947 12.633 1.858 1.00 0.00 H -HETATM 1049 O HOH A 346 28.440 11.031 15.242 1.00 0.00 O -HETATM 1050 H1 HOH A 346 27.833 11.054 14.501 1.00 0.00 H -HETATM 1051 H2 HOH A 346 28.135 10.299 15.779 1.00 0.00 H -HETATM 1052 O HOH A 347 29.870 14.759 13.853 1.00 0.00 O -HETATM 1053 H1 HOH A 347 30.822 14.675 13.803 1.00 0.00 H -HETATM 1054 H2 HOH A 347 29.722 15.423 14.526 1.00 0.00 H -HETATM 1055 O HOH A 348 17.323 7.410 14.238 1.00 0.00 O -HETATM 1056 H1 HOH A 348 17.827 6.831 14.810 1.00 0.00 H -HETATM 1057 H2 HOH A 348 16.584 7.694 14.776 1.00 0.00 H -HETATM 1058 O HOH A 349 24.377 8.817 13.771 1.00 0.00 O -HETATM 1059 H1 HOH A 349 23.611 9.386 13.687 1.00 0.00 H -HETATM 1060 H2 HOH A 349 24.558 8.525 12.878 1.00 0.00 H -HETATM 1061 O HOH A 350 19.355 5.553 15.133 1.00 0.00 O -HETATM 1062 H1 HOH A 350 19.396 5.255 16.041 1.00 0.00 H -HETATM 1063 H2 HOH A 350 20.210 5.954 14.974 1.00 0.00 H -HETATM 1064 O HOH A 351 21.296 4.132 13.100 1.00 0.00 O -HETATM 1065 H1 HOH A 351 20.765 3.642 12.473 1.00 0.00 H -HETATM 1066 H2 HOH A 351 21.965 4.561 12.566 1.00 0.00 H -HETATM 1067 O HOH A 352 30.194 8.599 12.864 1.00 0.00 O -HETATM 1068 H1 HOH A 352 30.608 8.754 13.714 1.00 0.00 H -HETATM 1069 H2 HOH A 352 29.259 8.725 13.027 1.00 0.00 H -HETATM 1070 O HOH A 353 24.955 8.551 10.834 1.00 0.00 O -HETATM 1071 H1 HOH A 353 25.374 9.395 10.662 1.00 0.00 H -HETATM 1072 H2 HOH A 353 24.036 8.689 10.605 1.00 0.00 H -HETATM 1073 O HOH A 354 27.292 6.283 12.218 1.00 0.00 O -HETATM 1074 H1 HOH A 354 27.411 5.687 12.957 1.00 0.00 H -HETATM 1075 H2 HOH A 354 28.151 6.320 11.798 1.00 0.00 H -HETATM 1076 O HOH A 355 29.630 6.837 10.794 1.00 0.00 O -HETATM 1077 H1 HOH A 355 29.104 7.361 10.191 1.00 0.00 H -HETATM 1078 H2 HOH A 355 29.973 7.470 11.425 1.00 0.00 H -HETATM 1079 O HOH A 356 22.806 14.857 11.950 1.00 0.00 O -HETATM 1080 H1 HOH A 356 22.268 15.581 11.631 1.00 0.00 H -HETATM 1081 H2 HOH A 356 23.059 14.380 11.160 1.00 0.00 H -HETATM 1082 O HOH A 357 24.058 2.825 13.475 1.00 0.00 O -HETATM 1083 H1 HOH A 357 24.648 2.517 14.163 1.00 0.00 H -HETATM 1084 H2 HOH A 357 23.240 2.353 13.631 1.00 0.00 H -HETATM 1085 O HOH A 358 28.878 2.442 13.709 1.00 0.00 O -HETATM 1086 H1 HOH A 358 28.189 1.780 13.644 1.00 0.00 H -HETATM 1087 H2 HOH A 358 29.598 1.996 14.154 1.00 0.00 H -HETATM 1088 O HOH A 359 25.662 16.092 12.208 1.00 0.00 O -HETATM 1089 H1 HOH A 359 25.588 16.995 12.516 1.00 0.00 H -HETATM 1090 H2 HOH A 359 24.760 15.773 12.181 1.00 0.00 H -HETATM 1091 O HOH A 360 17.065 13.419 5.512 1.00 0.00 O -HETATM 1092 H1 HOH A 360 17.395 12.551 5.280 1.00 0.00 H -HETATM 1093 H2 HOH A 360 17.494 13.625 6.342 1.00 0.00 H -HETATM 1094 O HOH A 361 21.661 11.750 3.172 1.00 0.00 O -HETATM 1095 H1 HOH A 361 21.361 11.627 4.072 1.00 0.00 H -HETATM 1096 H2 HOH A 361 21.555 10.891 2.764 1.00 0.00 H -HETATM 1097 O HOH A 362 17.554 14.286 8.250 1.00 0.00 O -HETATM 1098 H1 HOH A 362 17.117 14.467 9.082 1.00 0.00 H -HETATM 1099 H2 HOH A 362 18.122 15.044 8.108 1.00 0.00 H -HETATM 1100 O HOH A 363 17.386 6.798 4.609 1.00 0.00 O -HETATM 1101 H1 HOH A 363 16.731 6.530 3.965 1.00 0.00 H -HETATM 1102 H2 HOH A 363 18.224 6.689 4.159 1.00 0.00 H -HETATM 1103 O HOH A 364 18.424 7.184 9.149 1.00 0.00 O -HETATM 1104 H1 HOH A 364 18.791 7.096 10.029 1.00 0.00 H -HETATM 1105 H2 HOH A 364 17.855 6.420 9.050 1.00 0.00 H -HETATM 1106 O HOH A 365 17.975 4.095 13.055 1.00 0.00 O -HETATM 1107 H1 HOH A 365 17.081 4.061 13.394 1.00 0.00 H -HETATM 1108 H2 HOH A 365 18.515 4.293 13.820 1.00 0.00 H -HETATM 1109 O HOH A 366 19.839 11.697 14.311 1.00 0.00 O -HETATM 1110 H1 HOH A 366 19.796 11.326 15.193 1.00 0.00 H -HETATM 1111 H2 HOH A 366 19.970 12.635 14.451 1.00 0.00 H -HETATM 1112 O HOH A 367 23.540 13.253 9.912 1.00 0.00 O -HETATM 1113 H1 HOH A 367 23.299 13.520 9.025 1.00 0.00 H -HETATM 1114 H2 HOH A 367 24.480 13.424 9.967 1.00 0.00 H -HETATM 1115 O HOH A 368 19.678 14.643 11.431 1.00 0.00 O -HETATM 1116 H1 HOH A 368 19.084 14.512 12.170 1.00 0.00 H -HETATM 1117 H2 HOH A 368 19.670 13.807 10.965 1.00 0.00 H -HETATM 1118 O HOH A 369 19.309 12.009 10.382 1.00 0.00 O -HETATM 1119 H1 HOH A 369 18.583 11.390 10.314 1.00 0.00 H -HETATM 1120 H2 HOH A 369 19.370 12.403 9.512 1.00 0.00 H -HETATM 1121 O HOH A 370 22.914 14.224 7.167 1.00 0.00 O -HETATM 1122 H1 HOH A 370 23.430 13.612 6.642 1.00 0.00 H -HETATM 1123 H2 HOH A 370 23.563 14.726 7.658 1.00 0.00 H -HETATM 1124 O HOH A 371 25.653 15.114 7.994 1.00 0.00 O -HETATM 1125 H1 HOH A 371 25.941 14.860 7.117 1.00 0.00 H -HETATM 1126 H2 HOH A 371 26.166 14.562 8.584 1.00 0.00 H -HETATM 1127 O HOH A 372 17.592 15.326 3.592 1.00 0.00 O -HETATM 1128 H1 HOH A 372 17.424 14.694 4.290 1.00 0.00 H -HETATM 1129 H2 HOH A 372 16.726 15.532 3.241 1.00 0.00 H -HETATM 1130 O HOH A 373 25.720 16.036 15.360 1.00 0.00 O -HETATM 1131 H1 HOH A 373 26.647 15.800 15.404 1.00 0.00 H -HETATM 1132 H2 HOH A 373 25.705 16.863 14.879 1.00 0.00 H -HETATM 1133 O HOH A 374 9.640 24.909 23.615 1.00 0.00 O -HETATM 1134 H1 HOH A 374 9.559 23.995 23.344 1.00 0.00 H -HETATM 1135 H2 HOH A 374 9.226 25.406 22.909 1.00 0.00 H -HETATM 1136 O HOH A 375 7.772 26.687 25.496 1.00 0.00 O -HETATM 1137 H1 HOH A 375 6.996 26.207 25.786 1.00 0.00 H -HETATM 1138 H2 HOH A 375 8.423 26.008 25.321 1.00 0.00 H -HETATM 1139 O HOH A 376 11.792 31.093 24.276 1.00 0.00 O -HETATM 1140 H1 HOH A 376 11.330 30.322 24.604 1.00 0.00 H -HETATM 1141 H2 HOH A 376 12.605 31.120 24.781 1.00 0.00 H -HETATM 1142 O HOH A 377 7.212 29.363 25.503 1.00 0.00 O -HETATM 1143 H1 HOH A 377 7.143 28.422 25.342 1.00 0.00 H -HETATM 1144 H2 HOH A 377 7.974 29.453 26.075 1.00 0.00 H -HETATM 1145 O HOH A 378 8.243 22.170 25.730 1.00 0.00 O -HETATM 1146 H1 HOH A 378 8.619 21.297 25.617 1.00 0.00 H -HETATM 1147 H2 HOH A 378 8.145 22.506 24.839 1.00 0.00 H -HETATM 1148 O HOH A 379 2.374 20.543 21.191 1.00 0.00 O -HETATM 1149 H1 HOH A 379 2.480 21.443 21.498 1.00 0.00 H -HETATM 1150 H2 HOH A 379 1.463 20.494 20.901 1.00 0.00 H -HETATM 1151 O HOH A 380 12.025 19.665 22.663 1.00 0.00 O -HETATM 1152 H1 HOH A 380 12.846 19.175 22.705 1.00 0.00 H -HETATM 1153 H2 HOH A 380 12.059 20.255 23.416 1.00 0.00 H -HETATM 1154 O HOH A 381 4.214 23.511 25.524 1.00 0.00 O -HETATM 1155 H1 HOH A 381 4.722 24.009 26.165 1.00 0.00 H -HETATM 1156 H2 HOH A 381 4.746 22.735 25.348 1.00 0.00 H -HETATM 1157 O HOH A 382 16.315 21.682 29.227 1.00 0.00 O -HETATM 1158 H1 HOH A 382 15.611 22.070 28.708 1.00 0.00 H -HETATM 1159 H2 HOH A 382 16.581 22.377 29.829 1.00 0.00 H -HETATM 1160 O HOH A 383 2.498 18.151 29.790 1.00 0.00 O -HETATM 1161 H1 HOH A 383 2.500 18.668 28.985 1.00 0.00 H -HETATM 1162 H2 HOH A 383 1.668 17.674 29.767 1.00 0.00 H -HETATM 1163 O HOH A 384 8.885 28.263 21.289 1.00 0.00 O -HETATM 1164 H1 HOH A 384 8.267 28.728 20.726 1.00 0.00 H -HETATM 1165 H2 HOH A 384 9.397 28.956 21.706 1.00 0.00 H -HETATM 1166 O HOH A 385 3.748 27.791 27.968 1.00 0.00 O -HETATM 1167 H1 HOH A 385 3.415 28.418 28.610 1.00 0.00 H -HETATM 1168 H2 HOH A 385 3.925 28.317 27.188 1.00 0.00 H -HETATM 1169 O HOH A 386 12.262 21.605 25.435 1.00 0.00 O -HETATM 1170 H1 HOH A 386 11.557 21.894 26.016 1.00 0.00 H -HETATM 1171 H2 HOH A 386 12.623 22.415 25.075 1.00 0.00 H -HETATM 1172 O HOH A 387 2.960 29.759 29.783 1.00 0.00 O -HETATM 1173 H1 HOH A 387 3.577 30.434 29.501 1.00 0.00 H -HETATM 1174 H2 HOH A 387 2.099 30.168 29.691 1.00 0.00 H -HETATM 1175 O HOH A 388 15.330 21.051 25.826 1.00 0.00 O -HETATM 1176 H1 HOH A 388 14.383 21.085 25.958 1.00 0.00 H -HETATM 1177 H2 HOH A 388 15.655 21.865 26.211 1.00 0.00 H -HETATM 1178 O HOH A 389 5.862 17.350 24.122 1.00 0.00 O -HETATM 1179 H1 HOH A 389 6.170 16.795 23.405 1.00 0.00 H -HETATM 1180 H2 HOH A 389 4.932 17.485 23.939 1.00 0.00 H -HETATM 1181 O HOH A 390 12.708 29.789 21.502 1.00 0.00 O -HETATM 1182 H1 HOH A 390 12.598 28.846 21.627 1.00 0.00 H -HETATM 1183 H2 HOH A 390 12.705 30.150 22.388 1.00 0.00 H -HETATM 1184 O HOH A 391 10.812 27.970 27.741 1.00 0.00 O -HETATM 1185 H1 HOH A 391 11.229 27.756 26.906 1.00 0.00 H -HETATM 1186 H2 HOH A 391 11.536 28.227 28.312 1.00 0.00 H -HETATM 1187 O HOH A 392 8.250 25.415 20.858 1.00 0.00 O -HETATM 1188 H1 HOH A 392 7.323 25.349 21.087 1.00 0.00 H -HETATM 1189 H2 HOH A 392 8.403 26.353 20.743 1.00 0.00 H -HETATM 1190 O HOH A 393 8.237 21.687 17.855 1.00 0.00 O -HETATM 1191 H1 HOH A 393 7.298 21.848 17.940 1.00 0.00 H -HETATM 1192 H2 HOH A 393 8.556 22.406 17.308 1.00 0.00 H -HETATM 1193 O HOH A 394 14.758 26.369 27.832 1.00 0.00 O -HETATM 1194 H1 HOH A 394 13.930 26.438 27.357 1.00 0.00 H -HETATM 1195 H2 HOH A 394 15.354 26.954 27.364 1.00 0.00 H -HETATM 1196 O HOH A 395 12.280 26.977 21.361 1.00 0.00 O -HETATM 1197 H1 HOH A 395 11.661 26.639 20.714 1.00 0.00 H -HETATM 1198 H2 HOH A 395 12.262 26.333 22.069 1.00 0.00 H -HETATM 1199 O HOH A 396 11.723 23.156 28.778 1.00 0.00 O -HETATM 1200 H1 HOH A 396 11.310 23.981 29.032 1.00 0.00 H -HETATM 1201 H2 HOH A 396 10.990 22.570 28.586 1.00 0.00 H -HETATM 1202 O HOH A 397 3.856 25.942 23.640 1.00 0.00 O -HETATM 1203 H1 HOH A 397 3.452 25.229 23.144 1.00 0.00 H -HETATM 1204 H2 HOH A 397 3.942 25.597 24.529 1.00 0.00 H -HETATM 1205 O HOH A 398 4.324 29.628 25.804 1.00 0.00 O -HETATM 1206 H1 HOH A 398 4.027 29.023 25.125 1.00 0.00 H -HETATM 1207 H2 HOH A 398 5.274 29.666 25.693 1.00 0.00 H -HETATM 1208 O HOH A 399 2.569 22.716 27.420 1.00 0.00 O -HETATM 1209 H1 HOH A 399 3.120 22.826 26.645 1.00 0.00 H -HETATM 1210 H2 HOH A 399 3.083 23.090 28.135 1.00 0.00 H -HETATM 1211 O HOH A 400 10.456 26.216 18.369 1.00 0.00 O -HETATM 1212 H1 HOH A 400 10.896 25.378 18.222 1.00 0.00 H -HETATM 1213 H2 HOH A 400 11.169 26.849 18.455 1.00 0.00 H -HETATM 1214 O HOH A 401 3.023 18.180 24.523 1.00 0.00 O -HETATM 1215 H1 HOH A 401 2.580 18.961 24.191 1.00 0.00 H -HETATM 1216 H2 HOH A 401 3.581 18.503 25.230 1.00 0.00 H -HETATM 1217 O HOH A 402 6.139 17.801 19.403 1.00 0.00 O -HETATM 1218 H1 HOH A 402 5.514 17.797 20.129 1.00 0.00 H -HETATM 1219 H2 HOH A 402 6.052 16.934 19.007 1.00 0.00 H -HETATM 1220 O HOH A 403 5.060 18.724 26.382 1.00 0.00 O -HETATM 1221 H1 HOH A 403 5.358 19.631 26.301 1.00 0.00 H -HETATM 1222 H2 HOH A 403 5.609 18.236 25.768 1.00 0.00 H -HETATM 1223 O HOH A 404 2.814 23.303 22.251 1.00 0.00 O -HETATM 1224 H1 HOH A 404 2.588 23.087 23.156 1.00 0.00 H -HETATM 1225 H2 HOH A 404 2.033 23.736 21.906 1.00 0.00 H -HETATM 1226 O HOH A 405 10.044 23.309 20.850 1.00 0.00 O -HETATM 1227 H1 HOH A 405 9.445 24.033 20.666 1.00 0.00 H -HETATM 1228 H2 HOH A 405 10.592 23.247 20.068 1.00 0.00 H -HETATM 1229 O HOH A 406 8.650 21.946 22.880 1.00 0.00 O -HETATM 1230 H1 HOH A 406 9.043 22.263 22.067 1.00 0.00 H -HETATM 1231 H2 HOH A 406 9.012 21.067 22.995 1.00 0.00 H -HETATM 1232 O HOH A 407 9.236 24.536 26.975 1.00 0.00 O -HETATM 1233 H1 HOH A 407 8.504 25.045 27.324 1.00 0.00 H -HETATM 1234 H2 HOH A 407 8.838 23.719 26.674 1.00 0.00 H -HETATM 1235 O HOH A 408 5.674 21.212 25.381 1.00 0.00 O -HETATM 1236 H1 HOH A 408 5.677 20.771 24.531 1.00 0.00 H -HETATM 1237 H2 HOH A 408 6.569 21.534 25.488 1.00 0.00 H -HETATM 1238 O HOH A 409 5.736 22.213 18.371 1.00 0.00 O -HETATM 1239 H1 HOH A 409 5.857 22.172 19.320 1.00 0.00 H -HETATM 1240 H2 HOH A 409 5.351 23.075 18.216 1.00 0.00 H -HETATM 1241 O HOH A 410 9.699 19.990 26.388 1.00 0.00 O -HETATM 1242 H1 HOH A 410 9.716 20.441 27.232 1.00 0.00 H -HETATM 1243 H2 HOH A 410 9.450 19.090 26.601 1.00 0.00 H -HETATM 1244 O HOH A 411 4.748 24.523 17.770 1.00 0.00 O -HETATM 1245 H1 HOH A 411 4.180 24.075 17.143 1.00 0.00 H -HETATM 1246 H2 HOH A 411 5.457 24.882 17.236 1.00 0.00 H -HETATM 1247 O HOH A 412 5.975 25.272 27.127 1.00 0.00 O -HETATM 1248 H1 HOH A 412 6.342 24.798 27.873 1.00 0.00 H -HETATM 1249 H2 HOH A 412 5.785 26.146 27.468 1.00 0.00 H -HETATM 1250 O HOH A 413 3.764 24.313 29.446 1.00 0.00 O -HETATM 1251 H1 HOH A 413 3.460 25.192 29.671 1.00 0.00 H -HETATM 1252 H2 HOH A 413 4.719 24.373 29.481 1.00 0.00 H -HETATM 1253 O HOH A 414 2.293 28.519 20.042 1.00 0.00 O -HETATM 1254 H1 HOH A 414 1.519 27.979 19.882 1.00 0.00 H -HETATM 1255 H2 HOH A 414 3.022 28.000 19.704 1.00 0.00 H -HETATM 1256 O HOH A 415 13.051 27.515 25.835 1.00 0.00 O -HETATM 1257 H1 HOH A 415 13.771 28.011 25.445 1.00 0.00 H -HETATM 1258 H2 HOH A 415 12.850 26.837 25.190 1.00 0.00 H -HETATM 1259 O HOH A 416 8.512 18.909 19.978 1.00 0.00 O -HETATM 1260 H1 HOH A 416 7.699 18.411 19.902 1.00 0.00 H -HETATM 1261 H2 HOH A 416 8.319 19.749 19.562 1.00 0.00 H -HETATM 1262 O HOH A 417 11.227 23.281 18.274 1.00 0.00 O -HETATM 1263 H1 HOH A 417 12.115 23.593 18.099 1.00 0.00 H -HETATM 1264 H2 HOH A 417 11.198 22.408 17.882 1.00 0.00 H -HETATM 1265 O HOH A 418 2.336 28.187 23.680 1.00 0.00 O -HETATM 1266 H1 HOH A 418 2.854 27.384 23.626 1.00 0.00 H -HETATM 1267 H2 HOH A 418 1.885 28.125 24.522 1.00 0.00 H -HETATM 1268 O HOH A 419 7.223 29.454 18.953 1.00 0.00 O -HETATM 1269 H1 HOH A 419 7.565 30.198 18.457 1.00 0.00 H -HETATM 1270 H2 HOH A 419 6.395 29.767 19.315 1.00 0.00 H -HETATM 1271 O HOH A 420 13.499 24.592 17.742 1.00 0.00 O -HETATM 1272 H1 HOH A 420 13.415 25.024 16.892 1.00 0.00 H -HETATM 1273 H2 HOH A 420 14.218 25.052 18.175 1.00 0.00 H -HETATM 1274 O HOH A 421 10.106 28.775 24.318 1.00 0.00 O -HETATM 1275 H1 HOH A 421 10.458 28.178 23.658 1.00 0.00 H -HETATM 1276 H2 HOH A 421 9.222 28.450 24.488 1.00 0.00 H -HETATM 1277 O HOH A 422 6.192 29.535 21.725 1.00 0.00 O -HETATM 1278 H1 HOH A 422 6.880 30.082 22.105 1.00 0.00 H -HETATM 1279 H2 HOH A 422 5.406 30.079 21.760 1.00 0.00 H -HETATM 1280 O HOH A 423 5.495 26.540 21.337 1.00 0.00 O -HETATM 1281 H1 HOH A 423 5.951 27.350 21.563 1.00 0.00 H -HETATM 1282 H2 HOH A 423 5.144 26.222 22.169 1.00 0.00 H -HETATM 1283 O HOH A 424 9.072 30.053 27.284 1.00 0.00 O -HETATM 1284 H1 HOH A 424 9.714 29.353 27.397 1.00 0.00 H -HETATM 1285 H2 HOH A 424 9.597 30.833 27.104 1.00 0.00 H -HETATM 1286 O HOH A 425 12.917 30.338 17.008 1.00 0.00 O -HETATM 1287 H1 HOH A 425 12.691 29.621 17.600 1.00 0.00 H -HETATM 1288 H2 HOH A 425 12.527 30.090 16.170 1.00 0.00 H -HETATM 1289 O HOH A 426 12.499 28.255 18.669 1.00 0.00 O -HETATM 1290 H1 HOH A 426 12.211 28.717 19.457 1.00 0.00 H -HETATM 1291 H2 HOH A 426 13.294 27.795 18.938 1.00 0.00 H -HETATM 1292 O HOH A 427 9.890 21.135 29.020 1.00 0.00 O -HETATM 1293 H1 HOH A 427 10.258 20.314 29.348 1.00 0.00 H -HETATM 1294 H2 HOH A 427 9.029 21.195 29.436 1.00 0.00 H -HETATM 1295 O HOH A 428 13.256 20.090 19.829 1.00 0.00 O -HETATM 1296 H1 HOH A 428 12.627 20.195 19.115 1.00 0.00 H -HETATM 1297 H2 HOH A 428 12.761 20.310 20.618 1.00 0.00 H -HETATM 1298 O HOH A 429 5.224 22.369 21.245 1.00 0.00 O -HETATM 1299 H1 HOH A 429 4.516 22.838 21.686 1.00 0.00 H -HETATM 1300 H2 HOH A 429 5.509 21.711 21.879 1.00 0.00 H -HETATM 1301 O HOH A 430 6.850 23.789 29.244 1.00 0.00 O -HETATM 1302 H1 HOH A 430 7.348 24.263 29.909 1.00 0.00 H -HETATM 1303 H2 HOH A 430 6.992 22.865 29.451 1.00 0.00 H -HETATM 1304 O HOH A 431 9.256 19.094 22.684 1.00 0.00 O -HETATM 1305 H1 HOH A 431 9.132 19.113 21.735 1.00 0.00 H -HETATM 1306 H2 HOH A 431 10.204 19.142 22.804 1.00 0.00 H -HETATM 1307 O HOH A 432 3.428 20.677 18.620 1.00 0.00 O -HETATM 1308 H1 HOH A 432 4.277 21.114 18.554 1.00 0.00 H -HETATM 1309 H2 HOH A 432 3.061 20.989 19.447 1.00 0.00 H -HETATM 1310 O HOH A 433 14.056 20.005 30.087 1.00 0.00 O -HETATM 1311 H1 HOH A 433 13.554 20.746 30.426 1.00 0.00 H -HETATM 1312 H2 HOH A 433 14.872 20.394 29.770 1.00 0.00 H -HETATM 1313 O HOH A 434 12.349 25.249 23.533 1.00 0.00 O -HETATM 1314 H1 HOH A 434 11.408 25.264 23.708 1.00 0.00 H -HETATM 1315 H2 HOH A 434 12.663 24.462 23.979 1.00 0.00 H -HETATM 1316 O HOH A 435 2.327 26.931 17.093 1.00 0.00 O -HETATM 1317 H1 HOH A 435 3.093 26.819 17.656 1.00 0.00 H -HETATM 1318 H2 HOH A 435 2.404 26.234 16.441 1.00 0.00 H -HETATM 1319 O HOH A 436 5.451 28.906 16.567 1.00 0.00 O -HETATM 1320 H1 HOH A 436 5.346 28.291 17.293 1.00 0.00 H -HETATM 1321 H2 HOH A 436 5.283 28.383 15.783 1.00 0.00 H -HETATM 1322 O HOH A 437 8.691 27.968 17.171 1.00 0.00 O -HETATM 1323 H1 HOH A 437 8.142 28.415 17.815 1.00 0.00 H -HETATM 1324 H2 HOH A 437 9.313 27.463 17.695 1.00 0.00 H -HETATM 1325 O HOH A 438 4.359 26.927 19.068 1.00 0.00 O -HETATM 1326 H1 HOH A 438 4.780 26.761 19.911 1.00 0.00 H -HETATM 1327 H2 HOH A 438 4.484 26.117 18.573 1.00 0.00 H -HETATM 1328 O HOH A 439 6.871 25.951 16.315 1.00 0.00 O -HETATM 1329 H1 HOH A 439 7.392 25.236 15.949 1.00 0.00 H -HETATM 1330 H2 HOH A 439 7.518 26.590 16.615 1.00 0.00 H -HETATM 1331 O HOH A 440 5.775 18.430 28.987 1.00 0.00 O -HETATM 1332 H1 HOH A 440 5.327 18.453 28.142 1.00 0.00 H -HETATM 1333 H2 HOH A 440 5.141 18.032 29.584 1.00 0.00 H -HETATM 1334 O HOH A 441 6.181 27.326 29.608 1.00 0.00 O -HETATM 1335 H1 HOH A 441 6.600 28.169 29.436 1.00 0.00 H -HETATM 1336 H2 HOH A 441 5.262 27.463 29.379 1.00 0.00 H -HETATM 1337 O HOH A 442 10.856 25.611 29.568 1.00 0.00 O -HETATM 1338 H1 HOH A 442 10.329 26.135 28.965 1.00 0.00 H -HETATM 1339 H2 HOH A 442 11.199 26.244 30.199 1.00 0.00 H -HETATM 1340 O HOH A 443 3.255 23.001 16.013 1.00 0.00 O -HETATM 1341 H1 HOH A 443 3.054 22.137 16.375 1.00 0.00 H -HETATM 1342 H2 HOH A 443 3.084 22.914 15.076 1.00 0.00 H -HETATM 1343 O HOH A 444 10.733 17.811 18.542 1.00 0.00 O -HETATM 1344 H1 HOH A 444 11.014 16.968 18.898 1.00 0.00 H -HETATM 1345 H2 HOH A 444 9.960 18.044 19.056 1.00 0.00 H -HETATM 1346 O HOH A 445 2.053 20.101 16.001 1.00 0.00 O -HETATM 1347 H1 HOH A 445 2.355 20.107 15.093 1.00 0.00 H -HETATM 1348 H2 HOH A 445 2.792 19.750 16.498 1.00 0.00 H -HETATM 1349 O HOH A 446 5.271 19.044 16.987 1.00 0.00 O -HETATM 1350 H1 HOH A 446 4.924 18.366 16.407 1.00 0.00 H -HETATM 1351 H2 HOH A 446 5.473 18.583 17.801 1.00 0.00 H -HETATM 1352 O HOH A 447 2.887 30.525 21.946 1.00 0.00 O -HETATM 1353 H1 HOH A 447 2.586 30.401 22.847 1.00 0.00 H -HETATM 1354 H2 HOH A 447 2.780 29.665 21.538 1.00 0.00 H -HETATM 1355 O HOH A 448 15.112 27.049 19.152 1.00 0.00 O -HETATM 1356 H1 HOH A 448 15.873 27.619 19.258 1.00 0.00 H -HETATM 1357 H2 HOH A 448 15.127 26.482 19.923 1.00 0.00 H -HETATM 1358 O HOH A 449 16.118 27.904 23.997 1.00 0.00 O -HETATM 1359 H1 HOH A 449 16.488 27.121 23.590 1.00 0.00 H -HETATM 1360 H2 HOH A 449 16.758 28.593 23.818 1.00 0.00 H -HETATM 1361 O HOH A 450 13.101 29.288 29.410 1.00 0.00 O -HETATM 1362 H1 HOH A 450 12.287 29.717 29.672 1.00 0.00 H -HETATM 1363 H2 HOH A 450 13.508 29.900 28.797 1.00 0.00 H -HETATM 1364 O HOH A 451 15.163 27.342 16.310 1.00 0.00 O -HETATM 1365 H1 HOH A 451 15.438 28.250 16.182 1.00 0.00 H -HETATM 1366 H2 HOH A 451 14.974 27.279 17.246 1.00 0.00 H -HETATM 1367 O HOH A 452 11.561 20.367 17.605 1.00 0.00 O -HETATM 1368 H1 HOH A 452 11.979 20.180 16.765 1.00 0.00 H -HETATM 1369 H2 HOH A 452 11.255 19.515 17.915 1.00 0.00 H -HETATM 1370 O HOH A 453 15.060 25.279 21.303 1.00 0.00 O -HETATM 1371 H1 HOH A 453 14.684 24.512 20.871 1.00 0.00 H -HETATM 1372 H2 HOH A 453 14.330 25.662 21.790 1.00 0.00 H -HETATM 1373 O HOH A 454 14.335 23.505 24.603 1.00 0.00 O -HETATM 1374 H1 HOH A 454 14.859 23.011 23.972 1.00 0.00 H -HETATM 1375 H2 HOH A 454 14.921 23.640 25.348 1.00 0.00 H -HETATM 1376 O HOH A 455 14.514 23.589 28.125 1.00 0.00 O -HETATM 1377 H1 HOH A 455 13.564 23.555 28.240 1.00 0.00 H -HETATM 1378 H2 HOH A 455 14.695 24.499 27.890 1.00 0.00 H -HETATM 1379 O HOH A 456 13.825 22.762 20.543 1.00 0.00 O -HETATM 1380 H1 HOH A 456 14.321 22.530 21.328 1.00 0.00 H -HETATM 1381 H2 HOH A 456 13.627 21.924 20.126 1.00 0.00 H -HETATM 1382 O HOH A 457 15.254 21.399 23.076 1.00 0.00 O -HETATM 1383 H1 HOH A 457 15.144 21.244 24.015 1.00 0.00 H -HETATM 1384 H2 HOH A 457 16.015 20.871 22.834 1.00 0.00 H -HETATM 1385 O HOH A 458 13.600 17.338 29.535 1.00 0.00 O -HETATM 1386 H1 HOH A 458 14.238 17.951 29.901 1.00 0.00 H -HETATM 1387 H2 HOH A 458 13.748 17.374 28.590 1.00 0.00 H -HETATM 1388 O HOH A 459 10.349 16.711 28.408 1.00 0.00 O -HETATM 1389 H1 HOH A 459 9.475 17.044 28.206 1.00 0.00 H -HETATM 1390 H2 HOH A 459 10.240 16.238 29.234 1.00 0.00 H -HETATM 1391 O HOH A 460 11.256 18.918 29.793 1.00 0.00 O -HETATM 1392 H1 HOH A 460 10.928 18.103 29.413 1.00 0.00 H -HETATM 1393 H2 HOH A 460 12.204 18.875 29.669 1.00 0.00 H -HETATM 1394 O HOH A 461 8.097 17.628 27.348 1.00 0.00 O -HETATM 1395 H1 HOH A 461 7.314 18.102 27.627 1.00 0.00 H -HETATM 1396 H2 HOH A 461 7.803 16.723 27.239 1.00 0.00 H -HETATM 1397 O HOH A 462 12.649 18.330 25.393 1.00 0.00 O -HETATM 1398 H1 HOH A 462 13.089 18.275 24.545 1.00 0.00 H -HETATM 1399 H2 HOH A 462 12.379 19.246 25.464 1.00 0.00 H -HETATM 1400 O HOH A 463 14.512 17.962 23.403 1.00 0.00 O -HETATM 1401 H1 HOH A 463 14.451 17.018 23.257 1.00 0.00 H -HETATM 1402 H2 HOH A 463 15.292 18.070 23.949 1.00 0.00 H -HETATM 1403 O HOH A 464 5.982 20.046 22.859 1.00 0.00 O -HETATM 1404 H1 HOH A 464 5.169 19.672 22.519 1.00 0.00 H -HETATM 1405 H2 HOH A 464 6.486 19.291 23.161 1.00 0.00 H -HETATM 1406 O HOH A 465 10.484 16.711 24.098 1.00 0.00 O -HETATM 1407 H1 HOH A 465 11.087 17.283 24.572 1.00 0.00 H -HETATM 1408 H2 HOH A 465 9.744 17.275 23.875 1.00 0.00 H -HETATM 1409 O HOH A 466 13.628 17.113 19.372 1.00 0.00 O -HETATM 1410 H1 HOH A 466 13.823 18.011 19.638 1.00 0.00 H -HETATM 1411 H2 HOH A 466 12.841 16.882 19.865 1.00 0.00 H -HETATM 1412 O HOH A 467 1.813 18.459 18.409 1.00 0.00 O -HETATM 1413 H1 HOH A 467 2.342 17.672 18.280 1.00 0.00 H -HETATM 1414 H2 HOH A 467 2.446 19.138 18.643 1.00 0.00 H -HETATM 1415 O HOH A 468 4.007 18.196 21.464 1.00 0.00 O -HETATM 1416 H1 HOH A 468 3.377 17.495 21.631 1.00 0.00 H -HETATM 1417 H2 HOH A 468 3.467 18.957 21.247 1.00 0.00 H -HETATM 1418 O HOH A 469 9.640 24.909 4.841 1.00 0.00 O -HETATM 1419 H1 HOH A 469 9.559 23.995 4.570 1.00 0.00 H -HETATM 1420 H2 HOH A 469 9.226 25.406 4.135 1.00 0.00 H -HETATM 1421 O HOH A 470 7.772 26.687 6.721 1.00 0.00 O -HETATM 1422 H1 HOH A 470 6.996 26.207 7.011 1.00 0.00 H -HETATM 1423 H2 HOH A 470 8.423 26.008 6.547 1.00 0.00 H -HETATM 1424 O HOH A 471 11.792 31.093 5.501 1.00 0.00 O -HETATM 1425 H1 HOH A 471 11.330 30.322 5.830 1.00 0.00 H -HETATM 1426 H2 HOH A 471 12.605 31.120 6.007 1.00 0.00 H -HETATM 1427 O HOH A 472 7.212 29.363 6.728 1.00 0.00 O -HETATM 1428 H1 HOH A 472 7.143 28.422 6.567 1.00 0.00 H -HETATM 1429 H2 HOH A 472 7.974 29.453 7.301 1.00 0.00 H -HETATM 1430 O HOH A 473 8.243 22.170 6.955 1.00 0.00 O -HETATM 1431 H1 HOH A 473 8.619 21.297 6.843 1.00 0.00 H -HETATM 1432 H2 HOH A 473 8.145 22.506 6.064 1.00 0.00 H -HETATM 1433 O HOH A 474 2.374 20.543 2.417 1.00 0.00 O -HETATM 1434 H1 HOH A 474 2.480 21.443 2.724 1.00 0.00 H -HETATM 1435 H2 HOH A 474 1.463 20.494 2.127 1.00 0.00 H -HETATM 1436 O HOH A 475 12.025 19.665 3.888 1.00 0.00 O -HETATM 1437 H1 HOH A 475 12.846 19.175 3.931 1.00 0.00 H -HETATM 1438 H2 HOH A 475 12.059 20.255 4.641 1.00 0.00 H -HETATM 1439 O HOH A 476 4.214 23.511 6.750 1.00 0.00 O -HETATM 1440 H1 HOH A 476 4.722 24.009 7.390 1.00 0.00 H -HETATM 1441 H2 HOH A 476 4.746 22.735 6.574 1.00 0.00 H -HETATM 1442 O HOH A 477 16.315 21.682 10.453 1.00 0.00 O -HETATM 1443 H1 HOH A 477 15.611 22.070 9.934 1.00 0.00 H -HETATM 1444 H2 HOH A 477 16.581 22.377 11.055 1.00 0.00 H -HETATM 1445 O HOH A 478 2.498 18.151 11.016 1.00 0.00 O -HETATM 1446 H1 HOH A 478 2.500 18.668 10.211 1.00 0.00 H -HETATM 1447 H2 HOH A 478 1.668 17.674 10.993 1.00 0.00 H -HETATM 1448 O HOH A 479 8.885 28.263 2.515 1.00 0.00 O -HETATM 1449 H1 HOH A 479 8.267 28.728 1.951 1.00 0.00 H -HETATM 1450 H2 HOH A 479 9.397 28.956 2.932 1.00 0.00 H -HETATM 1451 O HOH A 480 3.748 27.791 9.193 1.00 0.00 O -HETATM 1452 H1 HOH A 480 3.415 28.418 9.835 1.00 0.00 H -HETATM 1453 H2 HOH A 480 3.925 28.317 8.414 1.00 0.00 H -HETATM 1454 O HOH A 481 12.262 21.605 6.661 1.00 0.00 O -HETATM 1455 H1 HOH A 481 11.557 21.894 7.241 1.00 0.00 H -HETATM 1456 H2 HOH A 481 12.623 22.415 6.301 1.00 0.00 H -HETATM 1457 O HOH A 482 2.960 29.759 11.008 1.00 0.00 O -HETATM 1458 H1 HOH A 482 3.577 30.434 10.727 1.00 0.00 H -HETATM 1459 H2 HOH A 482 2.099 30.168 10.917 1.00 0.00 H -HETATM 1460 O HOH A 483 15.330 21.051 7.052 1.00 0.00 O -HETATM 1461 H1 HOH A 483 14.383 21.085 7.183 1.00 0.00 H -HETATM 1462 H2 HOH A 483 15.655 21.865 7.437 1.00 0.00 H -HETATM 1463 O HOH A 484 5.862 17.350 5.347 1.00 0.00 O -HETATM 1464 H1 HOH A 484 6.170 16.795 4.631 1.00 0.00 H -HETATM 1465 H2 HOH A 484 4.932 17.485 5.165 1.00 0.00 H -HETATM 1466 O HOH A 485 12.708 29.789 2.727 1.00 0.00 O -HETATM 1467 H1 HOH A 485 12.598 28.846 2.852 1.00 0.00 H -HETATM 1468 H2 HOH A 485 12.705 30.150 3.614 1.00 0.00 H -HETATM 1469 O HOH A 486 10.812 27.970 8.967 1.00 0.00 O -HETATM 1470 H1 HOH A 486 11.229 27.756 8.132 1.00 0.00 H -HETATM 1471 H2 HOH A 486 11.536 28.227 9.537 1.00 0.00 H -HETATM 1472 O HOH A 487 8.250 25.415 2.084 1.00 0.00 O -HETATM 1473 H1 HOH A 487 7.323 25.349 2.312 1.00 0.00 H -HETATM 1474 H2 HOH A 487 8.403 26.353 1.969 1.00 0.00 H -HETATM 1475 O HOH A 488 14.758 26.369 9.058 1.00 0.00 O -HETATM 1476 H1 HOH A 488 13.930 26.438 8.583 1.00 0.00 H -HETATM 1477 H2 HOH A 488 15.354 26.954 8.590 1.00 0.00 H -HETATM 1478 O HOH A 489 12.280 26.977 2.587 1.00 0.00 O -HETATM 1479 H1 HOH A 489 11.661 26.639 1.940 1.00 0.00 H -HETATM 1480 H2 HOH A 489 12.262 26.333 3.295 1.00 0.00 H -HETATM 1481 O HOH A 490 11.723 23.156 10.004 1.00 0.00 O -HETATM 1482 H1 HOH A 490 11.310 23.981 10.258 1.00 0.00 H -HETATM 1483 H2 HOH A 490 10.990 22.570 9.811 1.00 0.00 H -HETATM 1484 O HOH A 491 3.856 25.942 4.865 1.00 0.00 O -HETATM 1485 H1 HOH A 491 3.452 25.229 4.370 1.00 0.00 H -HETATM 1486 H2 HOH A 491 3.942 25.597 5.754 1.00 0.00 H -HETATM 1487 O HOH A 492 4.324 29.628 7.029 1.00 0.00 O -HETATM 1488 H1 HOH A 492 4.027 29.023 6.350 1.00 0.00 H -HETATM 1489 H2 HOH A 492 5.274 29.666 6.918 1.00 0.00 H -HETATM 1490 O HOH A 493 2.569 22.716 8.645 1.00 0.00 O -HETATM 1491 H1 HOH A 493 3.120 22.826 7.871 1.00 0.00 H -HETATM 1492 H2 HOH A 493 3.083 23.090 9.361 1.00 0.00 H -HETATM 1493 O HOH A 494 3.416 29.367 13.680 1.00 0.00 O -HETATM 1494 H1 HOH A 494 2.519 29.591 13.928 1.00 0.00 H -HETATM 1495 H2 HOH A 494 3.441 29.490 12.731 1.00 0.00 H -HETATM 1496 O HOH A 495 15.396 30.154 12.921 1.00 0.00 O -HETATM 1497 H1 HOH A 495 15.522 29.915 12.003 1.00 0.00 H -HETATM 1498 H2 HOH A 495 15.438 29.323 13.393 1.00 0.00 H -HETATM 1499 O HOH A 496 3.023 18.180 5.749 1.00 0.00 O -HETATM 1500 H1 HOH A 496 2.580 18.961 5.417 1.00 0.00 H -HETATM 1501 H2 HOH A 496 3.581 18.503 6.456 1.00 0.00 H -HETATM 1502 O HOH A 497 7.310 21.047 11.352 1.00 0.00 O -HETATM 1503 H1 HOH A 497 6.848 21.255 12.164 1.00 0.00 H -HETATM 1504 H2 HOH A 497 6.908 20.233 11.049 1.00 0.00 H -HETATM 1505 O HOH A 498 12.310 22.267 12.482 1.00 0.00 O -HETATM 1506 H1 HOH A 498 11.460 21.968 12.803 1.00 0.00 H -HETATM 1507 H2 HOH A 498 12.150 22.512 11.570 1.00 0.00 H -HETATM 1508 O HOH A 499 9.405 23.768 14.582 1.00 0.00 O -HETATM 1509 H1 HOH A 499 9.731 22.934 14.242 1.00 0.00 H -HETATM 1510 H2 HOH A 499 10.193 24.291 14.729 1.00 0.00 H -HETATM 1511 O HOH A 500 5.060 18.724 7.607 1.00 0.00 O -HETATM 1512 H1 HOH A 500 5.358 19.631 7.527 1.00 0.00 H -HETATM 1513 H2 HOH A 500 5.609 18.236 6.993 1.00 0.00 H -HETATM 1514 O HOH A 501 2.814 23.303 3.477 1.00 0.00 O -HETATM 1515 H1 HOH A 501 2.588 23.087 4.381 1.00 0.00 H -HETATM 1516 H2 HOH A 501 2.033 23.736 3.131 1.00 0.00 H -HETATM 1517 O HOH A 502 10.044 23.309 2.076 1.00 0.00 O -HETATM 1518 H1 HOH A 502 9.445 24.033 1.892 1.00 0.00 H -HETATM 1519 H2 HOH A 502 10.592 23.247 1.293 1.00 0.00 H -HETATM 1520 O HOH A 503 5.254 24.202 14.143 1.00 0.00 O -HETATM 1521 H1 HOH A 503 5.158 23.261 13.993 1.00 0.00 H -HETATM 1522 H2 HOH A 503 6.097 24.423 13.747 1.00 0.00 H -HETATM 1523 O HOH A 504 8.650 21.946 4.106 1.00 0.00 O -HETATM 1524 H1 HOH A 504 9.043 22.263 3.293 1.00 0.00 H -HETATM 1525 H2 HOH A 504 9.012 21.067 4.220 1.00 0.00 H -HETATM 1526 O HOH A 505 6.960 20.697 15.366 1.00 0.00 O -HETATM 1527 H1 HOH A 505 6.270 20.504 16.000 1.00 0.00 H -HETATM 1528 H2 HOH A 505 7.703 20.980 15.898 1.00 0.00 H -HETATM 1529 O HOH A 506 9.236 24.536 8.201 1.00 0.00 O -HETATM 1530 H1 HOH A 506 8.504 25.045 8.550 1.00 0.00 H -HETATM 1531 H2 HOH A 506 8.838 23.719 7.900 1.00 0.00 H -HETATM 1532 O HOH A 507 5.674 21.212 6.606 1.00 0.00 O -HETATM 1533 H1 HOH A 507 5.677 20.771 5.757 1.00 0.00 H -HETATM 1534 H2 HOH A 507 6.569 21.534 6.714 1.00 0.00 H -HETATM 1535 O HOH A 508 9.699 19.990 7.613 1.00 0.00 O -HETATM 1536 H1 HOH A 508 9.716 20.441 8.458 1.00 0.00 H -HETATM 1537 H2 HOH A 508 9.450 19.090 7.827 1.00 0.00 H -HETATM 1538 O HOH A 509 5.975 25.272 8.353 1.00 0.00 O -HETATM 1539 H1 HOH A 509 6.342 24.798 9.099 1.00 0.00 H -HETATM 1540 H2 HOH A 509 5.785 26.146 8.694 1.00 0.00 H -HETATM 1541 O HOH A 510 3.764 24.313 10.671 1.00 0.00 O -HETATM 1542 H1 HOH A 510 3.460 25.192 10.896 1.00 0.00 H -HETATM 1543 H2 HOH A 510 4.719 24.373 10.707 1.00 0.00 H -HETATM 1544 O HOH A 511 13.051 27.515 7.061 1.00 0.00 O -HETATM 1545 H1 HOH A 511 13.771 28.011 6.670 1.00 0.00 H -HETATM 1546 H2 HOH A 511 12.850 26.837 6.416 1.00 0.00 H -HETATM 1547 O HOH A 512 8.433 27.586 12.948 1.00 0.00 O -HETATM 1548 H1 HOH A 512 8.367 26.666 12.693 1.00 0.00 H -HETATM 1549 H2 HOH A 512 7.804 27.684 13.662 1.00 0.00 H -HETATM 1550 O HOH A 513 2.336 28.187 4.906 1.00 0.00 O -HETATM 1551 H1 HOH A 513 2.854 27.384 4.852 1.00 0.00 H -HETATM 1552 H2 HOH A 513 1.885 28.125 5.748 1.00 0.00 H -HETATM 1553 O HOH A 514 3.022 25.612 14.702 1.00 0.00 O -HETATM 1554 H1 HOH A 514 2.722 25.757 13.805 1.00 0.00 H -HETATM 1555 H2 HOH A 514 3.793 25.052 14.610 1.00 0.00 H -HETATM 1556 O HOH A 515 8.365 30.408 12.698 1.00 0.00 O -HETATM 1557 H1 HOH A 515 8.379 29.477 12.480 1.00 0.00 H -HETATM 1558 H2 HOH A 515 7.657 30.494 13.337 1.00 0.00 H -HETATM 1559 O HOH A 516 14.576 27.049 12.045 1.00 0.00 O -HETATM 1560 H1 HOH A 516 13.851 27.642 11.848 1.00 0.00 H -HETATM 1561 H2 HOH A 516 15.104 27.041 11.246 1.00 0.00 H -HETATM 1562 O HOH A 517 10.106 28.775 5.543 1.00 0.00 O -HETATM 1563 H1 HOH A 517 10.458 28.178 4.883 1.00 0.00 H -HETATM 1564 H2 HOH A 517 9.222 28.450 5.714 1.00 0.00 H -HETATM 1565 O HOH A 518 6.192 29.535 2.950 1.00 0.00 O -HETATM 1566 H1 HOH A 518 6.880 30.082 3.331 1.00 0.00 H -HETATM 1567 H2 HOH A 518 5.406 30.079 2.985 1.00 0.00 H -HETATM 1568 O HOH A 519 5.495 26.540 2.563 1.00 0.00 O -HETATM 1569 H1 HOH A 519 5.951 27.350 2.789 1.00 0.00 H -HETATM 1570 H2 HOH A 519 5.144 26.222 3.395 1.00 0.00 H -HETATM 1571 O HOH A 520 9.072 30.053 8.510 1.00 0.00 O -HETATM 1572 H1 HOH A 520 9.714 29.353 8.623 1.00 0.00 H -HETATM 1573 H2 HOH A 520 9.597 30.833 8.329 1.00 0.00 H -HETATM 1574 O HOH A 521 9.890 21.135 10.246 1.00 0.00 O -HETATM 1575 H1 HOH A 521 10.258 20.314 10.574 1.00 0.00 H -HETATM 1576 H2 HOH A 521 9.029 21.195 10.661 1.00 0.00 H -HETATM 1577 O HOH A 522 5.224 22.369 2.470 1.00 0.00 O -HETATM 1578 H1 HOH A 522 4.516 22.838 2.912 1.00 0.00 H -HETATM 1579 H2 HOH A 522 5.509 21.711 3.105 1.00 0.00 H -HETATM 1580 O HOH A 523 6.850 23.789 10.470 1.00 0.00 O -HETATM 1581 H1 HOH A 523 7.348 24.263 11.135 1.00 0.00 H -HETATM 1582 H2 HOH A 523 6.992 22.865 10.677 1.00 0.00 H -HETATM 1583 O HOH A 524 9.256 19.094 3.910 1.00 0.00 O -HETATM 1584 H1 HOH A 524 9.132 19.113 2.961 1.00 0.00 H -HETATM 1585 H2 HOH A 524 10.204 19.142 4.030 1.00 0.00 H -HETATM 1586 O HOH A 525 14.056 20.005 11.312 1.00 0.00 O -HETATM 1587 H1 HOH A 525 13.554 20.746 11.652 1.00 0.00 H -HETATM 1588 H2 HOH A 525 14.872 20.394 10.996 1.00 0.00 H -HETATM 1589 O HOH A 526 12.349 25.249 4.759 1.00 0.00 O -HETATM 1590 H1 HOH A 526 11.408 25.264 4.933 1.00 0.00 H -HETATM 1591 H2 HOH A 526 12.663 24.462 5.205 1.00 0.00 H -HETATM 1592 O HOH A 527 9.665 29.805 15.242 1.00 0.00 O -HETATM 1593 H1 HOH A 527 9.059 29.828 14.501 1.00 0.00 H -HETATM 1594 H2 HOH A 527 9.361 29.074 15.779 1.00 0.00 H -HETATM 1595 O HOH A 528 5.602 27.592 13.771 1.00 0.00 O -HETATM 1596 H1 HOH A 528 4.837 28.160 13.687 1.00 0.00 H -HETATM 1597 H2 HOH A 528 5.784 27.299 12.878 1.00 0.00 H -HETATM 1598 O HOH A 529 12.745 29.322 14.329 1.00 0.00 O -HETATM 1599 H1 HOH A 529 13.486 29.660 13.826 1.00 0.00 H -HETATM 1600 H2 HOH A 529 11.982 29.492 13.776 1.00 0.00 H -HETATM 1601 O HOH A 530 2.521 22.907 13.100 1.00 0.00 O -HETATM 1602 H1 HOH A 530 1.991 22.416 12.473 1.00 0.00 H -HETATM 1603 H2 HOH A 530 3.190 23.335 12.566 1.00 0.00 H -HETATM 1604 O HOH A 531 11.419 27.374 12.864 1.00 0.00 O -HETATM 1605 H1 HOH A 531 11.833 27.528 13.714 1.00 0.00 H -HETATM 1606 H2 HOH A 531 10.484 27.499 13.027 1.00 0.00 H -HETATM 1607 O HOH A 532 11.891 24.713 14.868 1.00 0.00 O -HETATM 1608 H1 HOH A 532 12.474 23.959 14.780 1.00 0.00 H -HETATM 1609 H2 HOH A 532 12.068 25.244 14.092 1.00 0.00 H -HETATM 1610 O HOH A 533 3.009 19.873 13.180 1.00 0.00 O -HETATM 1611 H1 HOH A 533 2.914 19.255 12.455 1.00 0.00 H -HETATM 1612 H2 HOH A 533 2.428 20.600 12.953 1.00 0.00 H -HETATM 1613 O HOH A 534 5.775 18.430 10.213 1.00 0.00 O -HETATM 1614 H1 HOH A 534 5.327 18.453 9.367 1.00 0.00 H -HETATM 1615 H2 HOH A 534 5.141 18.032 10.810 1.00 0.00 H -HETATM 1616 O HOH A 535 6.181 27.326 10.834 1.00 0.00 O -HETATM 1617 H1 HOH A 535 6.600 28.169 10.662 1.00 0.00 H -HETATM 1618 H2 HOH A 535 5.262 27.463 10.605 1.00 0.00 H -HETATM 1619 O HOH A 536 8.517 25.057 12.218 1.00 0.00 O -HETATM 1620 H1 HOH A 536 8.637 24.462 12.957 1.00 0.00 H -HETATM 1621 H2 HOH A 536 9.377 25.094 11.798 1.00 0.00 H -HETATM 1622 O HOH A 537 10.856 25.611 10.794 1.00 0.00 O -HETATM 1623 H1 HOH A 537 10.329 26.135 10.191 1.00 0.00 H -HETATM 1624 H2 HOH A 537 11.199 26.244 11.425 1.00 0.00 H -HETATM 1625 O HOH A 538 5.284 21.600 13.475 1.00 0.00 O -HETATM 1626 H1 HOH A 538 5.874 21.291 14.163 1.00 0.00 H -HETATM 1627 H2 HOH A 538 4.466 21.128 13.631 1.00 0.00 H -HETATM 1628 O HOH A 539 10.103 21.216 13.709 1.00 0.00 O -HETATM 1629 H1 HOH A 539 9.415 20.554 13.644 1.00 0.00 H -HETATM 1630 H2 HOH A 539 10.824 20.770 14.154 1.00 0.00 H -HETATM 1631 O HOH A 540 2.887 30.525 3.172 1.00 0.00 O -HETATM 1632 H1 HOH A 540 2.586 30.401 4.072 1.00 0.00 H -HETATM 1633 H2 HOH A 540 2.780 29.665 2.764 1.00 0.00 H -HETATM 1634 O HOH A 541 16.118 27.904 5.222 1.00 0.00 O -HETATM 1635 H1 HOH A 541 16.488 27.121 4.816 1.00 0.00 H -HETATM 1636 H2 HOH A 541 16.758 28.593 5.044 1.00 0.00 H -HETATM 1637 O HOH A 542 13.101 29.288 10.635 1.00 0.00 O -HETATM 1638 H1 HOH A 542 12.287 29.717 10.898 1.00 0.00 H -HETATM 1639 H2 HOH A 542 13.508 29.900 10.022 1.00 0.00 H -HETATM 1640 O HOH A 543 15.060 25.279 2.528 1.00 0.00 O -HETATM 1641 H1 HOH A 543 14.684 24.512 2.096 1.00 0.00 H -HETATM 1642 H2 HOH A 543 14.330 25.662 3.016 1.00 0.00 H -HETATM 1643 O HOH A 544 14.450 24.426 12.162 1.00 0.00 O -HETATM 1644 H1 HOH A 544 14.219 24.198 11.262 1.00 0.00 H -HETATM 1645 H2 HOH A 544 14.710 25.346 12.117 1.00 0.00 H -HETATM 1646 O HOH A 545 14.335 23.505 5.829 1.00 0.00 O -HETATM 1647 H1 HOH A 545 14.859 23.011 5.198 1.00 0.00 H -HETATM 1648 H2 HOH A 545 14.921 23.640 6.574 1.00 0.00 H -HETATM 1649 O HOH A 546 14.514 23.589 9.351 1.00 0.00 O -HETATM 1650 H1 HOH A 546 13.564 23.555 9.466 1.00 0.00 H -HETATM 1651 H2 HOH A 546 14.695 24.499 9.116 1.00 0.00 H -HETATM 1652 O HOH A 547 13.825 22.762 1.768 1.00 0.00 O -HETATM 1653 H1 HOH A 547 14.321 22.530 2.553 1.00 0.00 H -HETATM 1654 H2 HOH A 547 13.627 21.924 1.352 1.00 0.00 H -HETATM 1655 O HOH A 548 15.254 21.399 4.302 1.00 0.00 O -HETATM 1656 H1 HOH A 548 15.144 21.244 5.240 1.00 0.00 H -HETATM 1657 H2 HOH A 548 16.015 20.871 4.060 1.00 0.00 H -HETATM 1658 O HOH A 549 13.600 17.338 10.760 1.00 0.00 O -HETATM 1659 H1 HOH A 549 14.238 17.951 11.126 1.00 0.00 H -HETATM 1660 H2 HOH A 549 13.748 17.374 9.815 1.00 0.00 H -HETATM 1661 O HOH A 550 6.971 18.491 13.668 1.00 0.00 O -HETATM 1662 H1 HOH A 550 6.910 19.083 14.417 1.00 0.00 H -HETATM 1663 H2 HOH A 550 7.911 18.383 13.523 1.00 0.00 H -HETATM 1664 O HOH A 551 9.608 18.148 13.307 1.00 0.00 O -HETATM 1665 H1 HOH A 551 10.222 18.465 12.645 1.00 0.00 H -HETATM 1666 H2 HOH A 551 10.153 17.662 13.927 1.00 0.00 H -HETATM 1667 O HOH A 552 10.349 16.711 9.634 1.00 0.00 O -HETATM 1668 H1 HOH A 552 9.475 17.044 9.431 1.00 0.00 H -HETATM 1669 H2 HOH A 552 10.240 16.238 10.459 1.00 0.00 H -HETATM 1670 O HOH A 553 11.256 18.918 11.018 1.00 0.00 O -HETATM 1671 H1 HOH A 553 10.928 18.103 10.638 1.00 0.00 H -HETATM 1672 H2 HOH A 553 12.204 18.875 10.895 1.00 0.00 H -HETATM 1673 O HOH A 554 8.097 17.628 8.573 1.00 0.00 O -HETATM 1674 H1 HOH A 554 7.314 18.102 8.853 1.00 0.00 H -HETATM 1675 H2 HOH A 554 7.803 16.723 8.465 1.00 0.00 H -HETATM 1676 O HOH A 555 12.649 18.330 6.618 1.00 0.00 O -HETATM 1677 H1 HOH A 555 13.089 18.275 5.770 1.00 0.00 H -HETATM 1678 H2 HOH A 555 12.379 19.246 6.689 1.00 0.00 H -HETATM 1679 O HOH A 556 14.512 17.962 4.629 1.00 0.00 O -HETATM 1680 H1 HOH A 556 14.451 17.018 4.482 1.00 0.00 H -HETATM 1681 H2 HOH A 556 15.292 18.070 5.174 1.00 0.00 H -HETATM 1682 O HOH A 557 5.982 20.046 4.085 1.00 0.00 O -HETATM 1683 H1 HOH A 557 5.169 19.672 3.745 1.00 0.00 H -HETATM 1684 H2 HOH A 557 6.486 19.291 4.387 1.00 0.00 H -HETATM 1685 O HOH A 558 10.484 16.711 5.323 1.00 0.00 O -HETATM 1686 H1 HOH A 558 11.087 17.283 5.798 1.00 0.00 H -HETATM 1687 H2 HOH A 558 9.744 17.275 5.101 1.00 0.00 H -HETATM 1688 O HOH A 559 4.007 18.196 2.689 1.00 0.00 O -HETATM 1689 H1 HOH A 559 3.377 17.495 2.856 1.00 0.00 H -HETATM 1690 H2 HOH A 559 3.467 18.957 2.473 1.00 0.00 H -HETATM 1691 O HOH A 560 4.132 17.475 15.125 1.00 0.00 O -HETATM 1692 H1 HOH A 560 3.851 17.978 14.361 1.00 0.00 H -HETATM 1693 H2 HOH A 560 4.514 16.677 14.759 1.00 0.00 H -HETATM 1694 O HOH A 561 10.734 16.890 15.703 1.00 0.00 O -HETATM 1695 H1 HOH A 561 10.621 17.210 16.598 1.00 0.00 H -HETATM 1696 H2 HOH A 561 11.551 17.291 15.406 1.00 0.00 H -HETATM 1697 O HOH A 562 9.640 6.135 23.615 1.00 0.00 O -HETATM 1698 H1 HOH A 562 9.559 5.221 23.344 1.00 0.00 H -HETATM 1699 H2 HOH A 562 9.226 6.632 22.909 1.00 0.00 H -HETATM 1700 O HOH A 563 7.772 7.913 25.496 1.00 0.00 O -HETATM 1701 H1 HOH A 563 6.996 7.433 25.786 1.00 0.00 H -HETATM 1702 H2 HOH A 563 8.423 7.234 25.321 1.00 0.00 H -HETATM 1703 O HOH A 564 11.792 12.319 24.276 1.00 0.00 O -HETATM 1704 H1 HOH A 564 11.330 11.548 24.604 1.00 0.00 H -HETATM 1705 H2 HOH A 564 12.605 12.346 24.781 1.00 0.00 H -HETATM 1706 O HOH A 565 1.768 12.259 26.569 1.00 0.00 O -HETATM 1707 H1 HOH A 565 2.071 11.369 26.390 1.00 0.00 H -HETATM 1708 H2 HOH A 565 2.513 12.816 26.341 1.00 0.00 H -HETATM 1709 O HOH A 566 8.019 14.605 23.896 1.00 0.00 O -HETATM 1710 H1 HOH A 566 7.400 15.061 23.326 1.00 0.00 H -HETATM 1711 H2 HOH A 566 8.874 14.760 23.495 1.00 0.00 H -HETATM 1712 O HOH A 567 7.212 10.589 25.503 1.00 0.00 O -HETATM 1713 H1 HOH A 567 7.143 9.648 25.342 1.00 0.00 H -HETATM 1714 H2 HOH A 567 7.974 10.679 26.075 1.00 0.00 H -HETATM 1715 O HOH A 568 8.243 3.396 25.730 1.00 0.00 O -HETATM 1716 H1 HOH A 568 8.619 2.523 25.617 1.00 0.00 H -HETATM 1717 H2 HOH A 568 8.145 3.732 24.839 1.00 0.00 H -HETATM 1718 O HOH A 569 2.374 1.768 21.191 1.00 0.00 O -HETATM 1719 H1 HOH A 569 2.480 2.669 21.498 1.00 0.00 H -HETATM 1720 H2 HOH A 569 1.463 1.720 20.901 1.00 0.00 H -HETATM 1721 O HOH A 570 4.214 4.737 25.524 1.00 0.00 O -HETATM 1722 H1 HOH A 570 4.722 5.235 26.165 1.00 0.00 H -HETATM 1723 H2 HOH A 570 4.746 3.960 25.348 1.00 0.00 H -HETATM 1724 O HOH A 571 16.315 2.907 29.227 1.00 0.00 O -HETATM 1725 H1 HOH A 571 15.611 3.296 28.708 1.00 0.00 H -HETATM 1726 H2 HOH A 571 16.581 3.602 29.829 1.00 0.00 H -HETATM 1727 O HOH A 572 8.885 9.489 21.289 1.00 0.00 O -HETATM 1728 H1 HOH A 572 8.267 9.954 20.726 1.00 0.00 H -HETATM 1729 H2 HOH A 572 9.397 10.181 21.706 1.00 0.00 H -HETATM 1730 O HOH A 573 3.748 9.016 27.968 1.00 0.00 O -HETATM 1731 H1 HOH A 573 3.415 9.643 28.610 1.00 0.00 H -HETATM 1732 H2 HOH A 573 3.925 9.542 27.188 1.00 0.00 H -HETATM 1733 O HOH A 574 12.262 2.831 25.435 1.00 0.00 O -HETATM 1734 H1 HOH A 574 11.557 3.119 26.016 1.00 0.00 H -HETATM 1735 H2 HOH A 574 12.623 3.641 25.075 1.00 0.00 H -HETATM 1736 O HOH A 575 2.960 10.984 29.783 1.00 0.00 O -HETATM 1737 H1 HOH A 575 3.577 11.659 29.501 1.00 0.00 H -HETATM 1738 H2 HOH A 575 2.099 11.393 29.691 1.00 0.00 H -HETATM 1739 O HOH A 576 13.878 12.448 27.698 1.00 0.00 O -HETATM 1740 H1 HOH A 576 13.194 13.118 27.690 1.00 0.00 H -HETATM 1741 H2 HOH A 576 14.417 12.646 26.933 1.00 0.00 H -HETATM 1742 O HOH A 577 15.330 2.276 25.826 1.00 0.00 O -HETATM 1743 H1 HOH A 577 14.383 2.310 25.958 1.00 0.00 H -HETATM 1744 H2 HOH A 577 15.655 3.090 26.211 1.00 0.00 H -HETATM 1745 O HOH A 578 11.414 14.293 26.413 1.00 0.00 O -HETATM 1746 H1 HOH A 578 11.426 13.889 25.545 1.00 0.00 H -HETATM 1747 H2 HOH A 578 10.861 15.067 26.309 1.00 0.00 H -HETATM 1748 O HOH A 579 12.708 11.014 21.502 1.00 0.00 O -HETATM 1749 H1 HOH A 579 12.598 10.072 21.627 1.00 0.00 H -HETATM 1750 H2 HOH A 579 12.705 11.376 22.388 1.00 0.00 H -HETATM 1751 O HOH A 580 10.812 9.196 27.741 1.00 0.00 O -HETATM 1752 H1 HOH A 580 11.229 8.982 26.906 1.00 0.00 H -HETATM 1753 H2 HOH A 580 11.536 9.453 28.312 1.00 0.00 H -HETATM 1754 O HOH A 581 8.250 6.641 20.858 1.00 0.00 O -HETATM 1755 H1 HOH A 581 7.323 6.575 21.087 1.00 0.00 H -HETATM 1756 H2 HOH A 581 8.403 7.579 20.743 1.00 0.00 H -HETATM 1757 O HOH A 582 8.237 2.913 17.855 1.00 0.00 O -HETATM 1758 H1 HOH A 582 7.298 3.074 17.940 1.00 0.00 H -HETATM 1759 H2 HOH A 582 8.556 3.631 17.308 1.00 0.00 H -HETATM 1760 O HOH A 583 14.758 7.594 27.832 1.00 0.00 O -HETATM 1761 H1 HOH A 583 13.930 7.664 27.357 1.00 0.00 H -HETATM 1762 H2 HOH A 583 15.354 8.180 27.364 1.00 0.00 H -HETATM 1763 O HOH A 584 12.280 8.203 21.361 1.00 0.00 O -HETATM 1764 H1 HOH A 584 11.661 7.865 20.714 1.00 0.00 H -HETATM 1765 H2 HOH A 584 12.262 7.559 22.069 1.00 0.00 H -HETATM 1766 O HOH A 585 11.723 4.381 28.778 1.00 0.00 O -HETATM 1767 H1 HOH A 585 11.310 5.207 29.032 1.00 0.00 H -HETATM 1768 H2 HOH A 585 10.990 3.796 28.586 1.00 0.00 H -HETATM 1769 O HOH A 586 3.856 7.167 23.640 1.00 0.00 O -HETATM 1770 H1 HOH A 586 3.452 6.455 23.144 1.00 0.00 H -HETATM 1771 H2 HOH A 586 3.942 6.823 24.529 1.00 0.00 H -HETATM 1772 O HOH A 587 4.324 10.854 25.804 1.00 0.00 O -HETATM 1773 H1 HOH A 587 4.027 10.249 25.125 1.00 0.00 H -HETATM 1774 H2 HOH A 587 5.274 10.892 25.693 1.00 0.00 H -HETATM 1775 O HOH A 588 2.569 3.942 27.420 1.00 0.00 O -HETATM 1776 H1 HOH A 588 3.120 4.051 26.645 1.00 0.00 H -HETATM 1777 H2 HOH A 588 3.083 4.315 28.135 1.00 0.00 H -HETATM 1778 O HOH A 589 12.413 14.427 29.466 1.00 0.00 O -HETATM 1779 H1 HOH A 589 11.936 15.235 29.273 1.00 0.00 H -HETATM 1780 H2 HOH A 589 11.729 13.775 29.619 1.00 0.00 H -HETATM 1781 O HOH A 590 10.456 7.442 18.369 1.00 0.00 O -HETATM 1782 H1 HOH A 590 10.896 6.604 18.222 1.00 0.00 H -HETATM 1783 H2 HOH A 590 11.169 8.075 18.455 1.00 0.00 H -HETATM 1784 O HOH A 591 8.566 12.381 22.337 1.00 0.00 O -HETATM 1785 H1 HOH A 591 9.006 13.124 21.922 1.00 0.00 H -HETATM 1786 H2 HOH A 591 8.505 12.624 23.261 1.00 0.00 H -HETATM 1787 O HOH A 592 11.233 15.368 19.693 1.00 0.00 O -HETATM 1788 H1 HOH A 592 11.073 15.078 20.591 1.00 0.00 H -HETATM 1789 H2 HOH A 592 11.068 14.592 19.158 1.00 0.00 H -HETATM 1790 O HOH A 593 3.712 15.148 21.470 1.00 0.00 O -HETATM 1791 H1 HOH A 593 3.536 14.232 21.257 1.00 0.00 H -HETATM 1792 H2 HOH A 593 2.857 15.507 21.710 1.00 0.00 H -HETATM 1793 O HOH A 594 10.936 12.877 18.253 1.00 0.00 O -HETATM 1794 H1 HOH A 594 10.242 12.875 17.593 1.00 0.00 H -HETATM 1795 H2 HOH A 594 11.678 12.453 17.822 1.00 0.00 H -HETATM 1796 O HOH A 595 10.501 14.503 22.328 1.00 0.00 O -HETATM 1797 H1 HOH A 595 10.956 13.722 22.642 1.00 0.00 H -HETATM 1798 H2 HOH A 595 10.840 15.214 22.872 1.00 0.00 H -HETATM 1799 O HOH A 596 2.814 4.529 22.251 1.00 0.00 O -HETATM 1800 H1 HOH A 596 2.588 4.312 23.156 1.00 0.00 H -HETATM 1801 H2 HOH A 596 2.033 4.962 21.906 1.00 0.00 H -HETATM 1802 O HOH A 597 10.044 4.535 20.850 1.00 0.00 O -HETATM 1803 H1 HOH A 597 9.445 5.259 20.666 1.00 0.00 H -HETATM 1804 H2 HOH A 597 10.592 4.473 20.068 1.00 0.00 H -HETATM 1805 O HOH A 598 8.650 3.171 22.880 1.00 0.00 O -HETATM 1806 H1 HOH A 598 9.043 3.489 22.067 1.00 0.00 H -HETATM 1807 H2 HOH A 598 9.012 2.293 22.995 1.00 0.00 H -HETATM 1808 O HOH A 599 9.236 5.762 26.975 1.00 0.00 O -HETATM 1809 H1 HOH A 599 8.504 6.271 27.324 1.00 0.00 H -HETATM 1810 H2 HOH A 599 8.838 4.945 26.674 1.00 0.00 H -HETATM 1811 O HOH A 600 5.674 2.437 25.381 1.00 0.00 O -HETATM 1812 H1 HOH A 600 5.677 1.996 24.531 1.00 0.00 H -HETATM 1813 H2 HOH A 600 6.569 2.759 25.488 1.00 0.00 H -HETATM 1814 O HOH A 601 5.736 3.439 18.371 1.00 0.00 O -HETATM 1815 H1 HOH A 601 5.857 3.397 19.320 1.00 0.00 H -HETATM 1816 H2 HOH A 601 5.351 4.301 18.216 1.00 0.00 H -HETATM 1817 O HOH A 602 4.748 5.749 17.770 1.00 0.00 O -HETATM 1818 H1 HOH A 602 4.180 5.301 17.143 1.00 0.00 H -HETATM 1819 H2 HOH A 602 5.457 6.108 17.236 1.00 0.00 H -HETATM 1820 O HOH A 603 5.975 6.498 27.127 1.00 0.00 O -HETATM 1821 H1 HOH A 603 6.342 6.023 27.873 1.00 0.00 H -HETATM 1822 H2 HOH A 603 5.785 7.372 27.468 1.00 0.00 H -HETATM 1823 O HOH A 604 3.764 5.538 29.446 1.00 0.00 O -HETATM 1824 H1 HOH A 604 3.460 6.418 29.671 1.00 0.00 H -HETATM 1825 H2 HOH A 604 4.719 5.598 29.481 1.00 0.00 H -HETATM 1826 O HOH A 605 2.293 9.745 20.042 1.00 0.00 O -HETATM 1827 H1 HOH A 605 1.519 9.204 19.882 1.00 0.00 H -HETATM 1828 H2 HOH A 605 3.022 9.225 19.704 1.00 0.00 H -HETATM 1829 O HOH A 606 13.051 8.741 25.835 1.00 0.00 O -HETATM 1830 H1 HOH A 606 13.771 9.237 25.445 1.00 0.00 H -HETATM 1831 H2 HOH A 606 12.850 8.063 25.190 1.00 0.00 H -HETATM 1832 O HOH A 607 11.227 4.507 18.274 1.00 0.00 O -HETATM 1833 H1 HOH A 607 12.115 4.819 18.099 1.00 0.00 H -HETATM 1834 H2 HOH A 607 11.198 3.634 17.882 1.00 0.00 H -HETATM 1835 O HOH A 608 2.336 9.413 23.680 1.00 0.00 O -HETATM 1836 H1 HOH A 608 2.854 8.609 23.626 1.00 0.00 H -HETATM 1837 H2 HOH A 608 1.885 9.351 24.522 1.00 0.00 H -HETATM 1838 O HOH A 609 7.223 10.679 18.953 1.00 0.00 O -HETATM 1839 H1 HOH A 609 7.565 11.423 18.457 1.00 0.00 H -HETATM 1840 H2 HOH A 609 6.395 10.992 19.315 1.00 0.00 H -HETATM 1841 O HOH A 610 13.499 5.818 17.742 1.00 0.00 O -HETATM 1842 H1 HOH A 610 13.415 6.249 16.892 1.00 0.00 H -HETATM 1843 H2 HOH A 610 14.218 6.278 18.175 1.00 0.00 H -HETATM 1844 O HOH A 611 14.527 12.672 20.470 1.00 0.00 O -HETATM 1845 H1 HOH A 611 13.885 12.018 20.745 1.00 0.00 H -HETATM 1846 H2 HOH A 611 14.140 13.078 19.694 1.00 0.00 H -HETATM 1847 O HOH A 612 10.106 10.001 24.318 1.00 0.00 O -HETATM 1848 H1 HOH A 612 10.458 9.404 23.658 1.00 0.00 H -HETATM 1849 H2 HOH A 612 9.222 9.675 24.488 1.00 0.00 H -HETATM 1850 O HOH A 613 6.192 10.761 21.725 1.00 0.00 O -HETATM 1851 H1 HOH A 613 6.880 11.308 22.105 1.00 0.00 H -HETATM 1852 H2 HOH A 613 5.406 11.305 21.760 1.00 0.00 H -HETATM 1853 O HOH A 614 5.495 7.765 21.337 1.00 0.00 O -HETATM 1854 H1 HOH A 614 5.951 8.576 21.563 1.00 0.00 H -HETATM 1855 H2 HOH A 614 5.144 7.447 22.169 1.00 0.00 H -HETATM 1856 O HOH A 615 7.798 13.276 28.566 1.00 0.00 O -HETATM 1857 H1 HOH A 615 8.443 13.482 29.244 1.00 0.00 H -HETATM 1858 H2 HOH A 615 8.161 12.515 28.113 1.00 0.00 H -HETATM 1859 O HOH A 616 9.072 11.279 27.284 1.00 0.00 O -HETATM 1860 H1 HOH A 616 9.714 10.578 27.397 1.00 0.00 H -HETATM 1861 H2 HOH A 616 9.597 12.059 27.104 1.00 0.00 H -HETATM 1862 O HOH A 617 12.499 9.481 18.669 1.00 0.00 O -HETATM 1863 H1 HOH A 617 12.211 9.942 19.457 1.00 0.00 H -HETATM 1864 H2 HOH A 617 13.294 9.021 18.938 1.00 0.00 H -HETATM 1865 O HOH A 618 4.716 12.974 18.600 1.00 0.00 O -HETATM 1866 H1 HOH A 618 4.707 13.707 17.984 1.00 0.00 H -HETATM 1867 H2 HOH A 618 3.795 12.727 18.692 1.00 0.00 H -HETATM 1868 O HOH A 619 9.890 2.360 29.020 1.00 0.00 O -HETATM 1869 H1 HOH A 619 10.258 1.540 29.348 1.00 0.00 H -HETATM 1870 H2 HOH A 619 9.029 2.420 29.436 1.00 0.00 H -HETATM 1871 O HOH A 620 7.702 13.037 17.262 1.00 0.00 O -HETATM 1872 H1 HOH A 620 7.803 12.833 16.333 1.00 0.00 H -HETATM 1873 H2 HOH A 620 6.802 12.782 17.467 1.00 0.00 H -HETATM 1874 O HOH A 621 5.224 3.595 21.245 1.00 0.00 O -HETATM 1875 H1 HOH A 621 4.516 4.063 21.686 1.00 0.00 H -HETATM 1876 H2 HOH A 621 5.509 2.937 21.879 1.00 0.00 H -HETATM 1877 O HOH A 622 6.850 5.014 29.244 1.00 0.00 O -HETATM 1878 H1 HOH A 622 7.348 5.489 29.909 1.00 0.00 H -HETATM 1879 H2 HOH A 622 6.992 4.091 29.451 1.00 0.00 H -HETATM 1880 O HOH A 623 6.343 15.555 21.957 1.00 0.00 O -HETATM 1881 H1 HOH A 623 6.598 15.517 21.035 1.00 0.00 H -HETATM 1882 H2 HOH A 623 5.395 15.429 21.950 1.00 0.00 H -HETATM 1883 O HOH A 624 3.428 1.903 18.620 1.00 0.00 O -HETATM 1884 H1 HOH A 624 4.277 2.340 18.554 1.00 0.00 H -HETATM 1885 H2 HOH A 624 3.061 2.215 19.447 1.00 0.00 H -HETATM 1886 O HOH A 625 12.349 6.474 23.533 1.00 0.00 O -HETATM 1887 H1 HOH A 625 11.408 6.489 23.708 1.00 0.00 H -HETATM 1888 H2 HOH A 625 12.663 5.688 23.979 1.00 0.00 H -HETATM 1889 O HOH A 626 2.327 8.156 17.093 1.00 0.00 O -HETATM 1890 H1 HOH A 626 3.093 8.044 17.656 1.00 0.00 H -HETATM 1891 H2 HOH A 626 2.404 7.460 16.441 1.00 0.00 H -HETATM 1892 O HOH A 627 14.351 13.645 25.208 1.00 0.00 O -HETATM 1893 H1 HOH A 627 14.476 14.468 25.681 1.00 0.00 H -HETATM 1894 H2 HOH A 627 15.218 13.434 24.861 1.00 0.00 H -HETATM 1895 O HOH A 628 1.823 15.738 24.880 1.00 0.00 O -HETATM 1896 H1 HOH A 628 2.559 15.190 25.151 1.00 0.00 H -HETATM 1897 H2 HOH A 628 2.207 16.604 24.741 1.00 0.00 H -HETATM 1898 O HOH A 629 4.933 14.911 16.703 1.00 0.00 O -HETATM 1899 H1 HOH A 629 5.726 15.200 16.251 1.00 0.00 H -HETATM 1900 H2 HOH A 629 4.414 14.481 16.024 1.00 0.00 H -HETATM 1901 O HOH A 630 5.451 10.132 16.567 1.00 0.00 O -HETATM 1902 H1 HOH A 630 5.346 9.517 17.293 1.00 0.00 H -HETATM 1903 H2 HOH A 630 5.283 9.608 15.783 1.00 0.00 H -HETATM 1904 O HOH A 631 8.691 9.194 17.171 1.00 0.00 O -HETATM 1905 H1 HOH A 631 8.142 9.641 17.815 1.00 0.00 H -HETATM 1906 H2 HOH A 631 9.313 8.689 17.695 1.00 0.00 H -HETATM 1907 O HOH A 632 4.359 8.153 19.068 1.00 0.00 O -HETATM 1908 H1 HOH A 632 4.780 7.987 19.911 1.00 0.00 H -HETATM 1909 H2 HOH A 632 4.484 7.343 18.573 1.00 0.00 H -HETATM 1910 O HOH A 633 6.871 7.177 16.315 1.00 0.00 O -HETATM 1911 H1 HOH A 633 7.392 6.462 15.949 1.00 0.00 H -HETATM 1912 H2 HOH A 633 7.518 7.815 16.615 1.00 0.00 H -HETATM 1913 O HOH A 634 6.181 8.551 29.608 1.00 0.00 O -HETATM 1914 H1 HOH A 634 6.600 9.395 29.436 1.00 0.00 H -HETATM 1915 H2 HOH A 634 5.262 8.689 29.379 1.00 0.00 H -HETATM 1916 O HOH A 635 10.856 6.837 29.568 1.00 0.00 O -HETATM 1917 H1 HOH A 635 10.329 7.361 28.965 1.00 0.00 H -HETATM 1918 H2 HOH A 635 11.199 7.470 30.199 1.00 0.00 H -HETATM 1919 O HOH A 636 3.255 4.226 16.013 1.00 0.00 O -HETATM 1920 H1 HOH A 636 3.054 3.363 16.375 1.00 0.00 H -HETATM 1921 H2 HOH A 636 3.084 4.139 15.076 1.00 0.00 H -HETATM 1922 O HOH A 637 7.436 15.258 18.605 1.00 0.00 O -HETATM 1923 H1 HOH A 637 8.331 15.596 18.627 1.00 0.00 H -HETATM 1924 H2 HOH A 637 7.468 14.536 17.978 1.00 0.00 H -HETATM 1925 O HOH A 638 2.887 11.750 21.946 1.00 0.00 O -HETATM 1926 H1 HOH A 638 2.586 11.627 22.847 1.00 0.00 H -HETATM 1927 H2 HOH A 638 2.780 10.891 21.538 1.00 0.00 H -HETATM 1928 O HOH A 639 15.112 8.275 19.152 1.00 0.00 O -HETATM 1929 H1 HOH A 639 15.873 8.844 19.258 1.00 0.00 H -HETATM 1930 H2 HOH A 639 15.127 7.707 19.923 1.00 0.00 H -HETATM 1931 O HOH A 640 16.118 9.130 23.997 1.00 0.00 O -HETATM 1932 H1 HOH A 640 16.488 8.346 23.590 1.00 0.00 H -HETATM 1933 H2 HOH A 640 16.758 9.819 23.818 1.00 0.00 H -HETATM 1934 O HOH A 641 13.101 10.513 29.410 1.00 0.00 O -HETATM 1935 H1 HOH A 641 12.287 10.943 29.672 1.00 0.00 H -HETATM 1936 H2 HOH A 641 13.508 11.125 28.797 1.00 0.00 H -HETATM 1937 O HOH A 642 15.163 8.568 16.310 1.00 0.00 O -HETATM 1938 H1 HOH A 642 15.438 9.476 16.182 1.00 0.00 H -HETATM 1939 H2 HOH A 642 14.974 8.504 17.246 1.00 0.00 H -HETATM 1940 O HOH A 643 15.060 6.505 21.303 1.00 0.00 O -HETATM 1941 H1 HOH A 643 14.684 5.738 20.871 1.00 0.00 H -HETATM 1942 H2 HOH A 643 14.330 6.887 21.790 1.00 0.00 H -HETATM 1943 O HOH A 644 14.335 4.731 24.603 1.00 0.00 O -HETATM 1944 H1 HOH A 644 14.859 4.237 23.972 1.00 0.00 H -HETATM 1945 H2 HOH A 644 14.921 4.866 25.348 1.00 0.00 H -HETATM 1946 O HOH A 645 14.514 4.815 28.125 1.00 0.00 O -HETATM 1947 H1 HOH A 645 13.564 4.781 28.240 1.00 0.00 H -HETATM 1948 H2 HOH A 645 14.695 5.725 27.890 1.00 0.00 H -HETATM 1949 O HOH A 646 13.825 3.988 20.543 1.00 0.00 O -HETATM 1950 H1 HOH A 646 14.321 3.755 21.328 1.00 0.00 H -HETATM 1951 H2 HOH A 646 13.627 3.149 20.126 1.00 0.00 H -HETATM 1952 O HOH A 647 15.254 2.624 23.076 1.00 0.00 O -HETATM 1953 H1 HOH A 647 15.144 2.470 24.015 1.00 0.00 H -HETATM 1954 H2 HOH A 647 16.015 2.096 22.834 1.00 0.00 H -HETATM 1955 O HOH A 648 13.158 15.265 22.937 1.00 0.00 O -HETATM 1956 H1 HOH A 648 13.754 14.944 22.260 1.00 0.00 H -HETATM 1957 H2 HOH A 648 13.416 14.792 23.728 1.00 0.00 H -HETATM 1958 O HOH A 649 4.765 13.253 28.687 1.00 0.00 O -HETATM 1959 H1 HOH A 649 4.524 13.520 27.800 1.00 0.00 H -HETATM 1960 H2 HOH A 649 5.706 13.424 28.742 1.00 0.00 H -HETATM 1961 O HOH A 650 16.026 15.272 29.488 1.00 0.00 O -HETATM 1962 H1 HOH A 650 15.532 15.669 28.770 1.00 0.00 H -HETATM 1963 H2 HOH A 650 15.417 14.647 29.881 1.00 0.00 H -HETATM 1964 O HOH A 651 13.710 15.915 26.766 1.00 0.00 O -HETATM 1965 H1 HOH A 651 13.250 16.666 26.392 1.00 0.00 H -HETATM 1966 H2 HOH A 651 13.081 15.195 26.708 1.00 0.00 H -HETATM 1967 O HOH A 652 4.139 14.224 25.941 1.00 0.00 O -HETATM 1968 H1 HOH A 652 4.656 13.612 25.416 1.00 0.00 H -HETATM 1969 H2 HOH A 652 4.789 14.726 26.432 1.00 0.00 H -HETATM 1970 O HOH A 653 6.879 15.114 26.768 1.00 0.00 O -HETATM 1971 H1 HOH A 653 7.167 14.860 25.891 1.00 0.00 H -HETATM 1972 H2 HOH A 653 7.391 14.562 27.359 1.00 0.00 H -HETATM 1973 O HOH A 654 15.181 15.579 21.132 1.00 0.00 O -HETATM 1974 H1 HOH A 654 15.356 14.892 20.488 1.00 0.00 H -HETATM 1975 H2 HOH A 654 14.483 16.103 20.740 1.00 0.00 H -HETATM 1976 O HOH A 655 3.023 15.968 18.686 1.00 0.00 O -HETATM 1977 H1 HOH A 655 3.755 15.684 18.138 1.00 0.00 H -HETATM 1978 H2 HOH A 655 3.283 15.729 19.576 1.00 0.00 H -HETATM 1979 O HOH A 656 2.185 12.085 18.690 1.00 0.00 O -HETATM 1980 H1 HOH A 656 1.556 12.553 19.239 1.00 0.00 H -HETATM 1981 H2 HOH A 656 2.300 11.239 19.125 1.00 0.00 H -HETATM 1982 O HOH A 657 9.640 6.135 4.841 1.00 0.00 O -HETATM 1983 H1 HOH A 657 9.559 5.221 4.570 1.00 0.00 H -HETATM 1984 H2 HOH A 657 9.226 6.632 4.135 1.00 0.00 H -HETATM 1985 O HOH A 658 7.772 7.913 6.721 1.00 0.00 O -HETATM 1986 H1 HOH A 658 6.996 7.433 7.011 1.00 0.00 H -HETATM 1987 H2 HOH A 658 8.423 7.234 6.547 1.00 0.00 H -HETATM 1988 O HOH A 659 11.792 12.319 5.501 1.00 0.00 O -HETATM 1989 H1 HOH A 659 11.330 11.548 5.830 1.00 0.00 H -HETATM 1990 H2 HOH A 659 12.605 12.346 6.007 1.00 0.00 H -HETATM 1991 O HOH A 660 1.768 12.259 7.795 1.00 0.00 O -HETATM 1992 H1 HOH A 660 2.071 11.369 7.616 1.00 0.00 H -HETATM 1993 H2 HOH A 660 2.513 12.816 7.567 1.00 0.00 H -HETATM 1994 O HOH A 661 8.019 14.605 5.122 1.00 0.00 O -HETATM 1995 H1 HOH A 661 7.400 15.061 4.551 1.00 0.00 H -HETATM 1996 H2 HOH A 661 8.874 14.760 4.721 1.00 0.00 H -HETATM 1997 O HOH A 662 7.212 10.589 6.728 1.00 0.00 O -HETATM 1998 H1 HOH A 662 7.143 9.648 6.567 1.00 0.00 H -HETATM 1999 H2 HOH A 662 7.974 10.679 7.301 1.00 0.00 H -HETATM 2000 O HOH A 663 8.243 3.396 6.955 1.00 0.00 O -HETATM 2001 H1 HOH A 663 8.619 2.523 6.843 1.00 0.00 H -HETATM 2002 H2 HOH A 663 8.145 3.732 6.064 1.00 0.00 H -HETATM 2003 O HOH A 664 2.374 1.768 2.417 1.00 0.00 O -HETATM 2004 H1 HOH A 664 2.480 2.669 2.724 1.00 0.00 H -HETATM 2005 H2 HOH A 664 1.463 1.720 2.127 1.00 0.00 H -HETATM 2006 O HOH A 665 4.214 4.737 6.750 1.00 0.00 O -HETATM 2007 H1 HOH A 665 4.722 5.235 7.390 1.00 0.00 H -HETATM 2008 H2 HOH A 665 4.746 3.960 6.574 1.00 0.00 H -HETATM 2009 O HOH A 666 16.315 2.907 10.453 1.00 0.00 O -HETATM 2010 H1 HOH A 666 15.611 3.296 9.934 1.00 0.00 H -HETATM 2011 H2 HOH A 666 16.581 3.602 11.055 1.00 0.00 H -HETATM 2012 O HOH A 667 8.885 9.489 2.515 1.00 0.00 O -HETATM 2013 H1 HOH A 667 8.267 9.954 1.951 1.00 0.00 H -HETATM 2014 H2 HOH A 667 9.397 10.181 2.932 1.00 0.00 H -HETATM 2015 O HOH A 668 3.748 9.016 9.193 1.00 0.00 O -HETATM 2016 H1 HOH A 668 3.415 9.643 9.835 1.00 0.00 H -HETATM 2017 H2 HOH A 668 3.925 9.542 8.414 1.00 0.00 H -HETATM 2018 O HOH A 669 12.262 2.831 6.661 1.00 0.00 O -HETATM 2019 H1 HOH A 669 11.557 3.119 7.241 1.00 0.00 H -HETATM 2020 H2 HOH A 669 12.623 3.641 6.301 1.00 0.00 H -HETATM 2021 O HOH A 670 2.960 10.984 11.008 1.00 0.00 O -HETATM 2022 H1 HOH A 670 3.577 11.659 10.727 1.00 0.00 H -HETATM 2023 H2 HOH A 670 2.099 11.393 10.917 1.00 0.00 H -HETATM 2024 O HOH A 671 13.878 12.448 8.924 1.00 0.00 O -HETATM 2025 H1 HOH A 671 13.194 13.118 8.915 1.00 0.00 H -HETATM 2026 H2 HOH A 671 14.417 12.646 8.158 1.00 0.00 H -HETATM 2027 O HOH A 672 15.330 2.276 7.052 1.00 0.00 O -HETATM 2028 H1 HOH A 672 14.383 2.310 7.183 1.00 0.00 H -HETATM 2029 H2 HOH A 672 15.655 3.090 7.437 1.00 0.00 H -HETATM 2030 O HOH A 673 11.414 14.293 7.638 1.00 0.00 O -HETATM 2031 H1 HOH A 673 11.426 13.889 6.770 1.00 0.00 H -HETATM 2032 H2 HOH A 673 10.861 15.067 7.534 1.00 0.00 H -HETATM 2033 O HOH A 674 12.708 11.014 2.727 1.00 0.00 O -HETATM 2034 H1 HOH A 674 12.598 10.072 2.852 1.00 0.00 H -HETATM 2035 H2 HOH A 674 12.705 11.376 3.614 1.00 0.00 H -HETATM 2036 O HOH A 675 10.812 9.196 8.967 1.00 0.00 O -HETATM 2037 H1 HOH A 675 11.229 8.982 8.132 1.00 0.00 H -HETATM 2038 H2 HOH A 675 11.536 9.453 9.537 1.00 0.00 H -HETATM 2039 O HOH A 676 8.250 6.641 2.084 1.00 0.00 O -HETATM 2040 H1 HOH A 676 7.323 6.575 2.312 1.00 0.00 H -HETATM 2041 H2 HOH A 676 8.403 7.579 1.969 1.00 0.00 H -HETATM 2042 O HOH A 677 14.758 7.594 9.058 1.00 0.00 O -HETATM 2043 H1 HOH A 677 13.930 7.664 8.583 1.00 0.00 H -HETATM 2044 H2 HOH A 677 15.354 8.180 8.590 1.00 0.00 H -HETATM 2045 O HOH A 678 12.280 8.203 2.587 1.00 0.00 O -HETATM 2046 H1 HOH A 678 11.661 7.865 1.940 1.00 0.00 H -HETATM 2047 H2 HOH A 678 12.262 7.559 3.295 1.00 0.00 H -HETATM 2048 O HOH A 679 11.723 4.381 10.004 1.00 0.00 O -HETATM 2049 H1 HOH A 679 11.310 5.207 10.258 1.00 0.00 H -HETATM 2050 H2 HOH A 679 10.990 3.796 9.811 1.00 0.00 H -HETATM 2051 O HOH A 680 3.856 7.167 4.865 1.00 0.00 O -HETATM 2052 H1 HOH A 680 3.452 6.455 4.370 1.00 0.00 H -HETATM 2053 H2 HOH A 680 3.942 6.823 5.754 1.00 0.00 H -HETATM 2054 O HOH A 681 4.324 10.854 7.029 1.00 0.00 O -HETATM 2055 H1 HOH A 681 4.027 10.249 6.350 1.00 0.00 H -HETATM 2056 H2 HOH A 681 5.274 10.892 6.918 1.00 0.00 H -HETATM 2057 O HOH A 682 2.569 3.942 8.645 1.00 0.00 O -HETATM 2058 H1 HOH A 682 3.120 4.051 7.871 1.00 0.00 H -HETATM 2059 H2 HOH A 682 3.083 4.315 9.361 1.00 0.00 H -HETATM 2060 O HOH A 683 12.413 14.427 10.692 1.00 0.00 O -HETATM 2061 H1 HOH A 683 11.936 15.235 10.499 1.00 0.00 H -HETATM 2062 H2 HOH A 683 11.729 13.775 10.844 1.00 0.00 H -HETATM 2063 O HOH A 684 3.416 10.592 13.680 1.00 0.00 O -HETATM 2064 H1 HOH A 684 2.519 10.816 13.928 1.00 0.00 H -HETATM 2065 H2 HOH A 684 3.441 10.716 12.731 1.00 0.00 H -HETATM 2066 O HOH A 685 8.566 12.381 3.562 1.00 0.00 O -HETATM 2067 H1 HOH A 685 9.006 13.124 3.148 1.00 0.00 H -HETATM 2068 H2 HOH A 685 8.505 12.624 4.486 1.00 0.00 H -HETATM 2069 O HOH A 686 4.041 13.406 14.464 1.00 0.00 O -HETATM 2070 H1 HOH A 686 4.013 13.810 13.597 1.00 0.00 H -HETATM 2071 H2 HOH A 686 3.878 12.477 14.302 1.00 0.00 H -HETATM 2072 O HOH A 687 9.258 15.083 11.490 1.00 0.00 O -HETATM 2073 H1 HOH A 687 9.772 14.993 12.293 1.00 0.00 H -HETATM 2074 H2 HOH A 687 8.415 15.429 11.783 1.00 0.00 H -HETATM 2075 O HOH A 688 3.712 15.148 2.696 1.00 0.00 O -HETATM 2076 H1 HOH A 688 3.536 14.232 2.483 1.00 0.00 H -HETATM 2077 H2 HOH A 688 2.857 15.507 2.936 1.00 0.00 H -HETATM 2078 O HOH A 689 10.501 14.503 3.553 1.00 0.00 O -HETATM 2079 H1 HOH A 689 10.956 13.722 3.867 1.00 0.00 H -HETATM 2080 H2 HOH A 689 10.840 15.214 4.098 1.00 0.00 H -HETATM 2081 O HOH A 690 15.248 3.433 13.886 1.00 0.00 O -HETATM 2082 H1 HOH A 690 14.633 3.941 13.357 1.00 0.00 H -HETATM 2083 H2 HOH A 690 14.928 2.533 13.828 1.00 0.00 H -HETATM 2084 O HOH A 691 12.310 3.493 12.482 1.00 0.00 O -HETATM 2085 H1 HOH A 691 11.460 3.194 12.803 1.00 0.00 H -HETATM 2086 H2 HOH A 691 12.150 3.737 11.570 1.00 0.00 H -HETATM 2087 O HOH A 692 9.405 4.993 14.582 1.00 0.00 O -HETATM 2088 H1 HOH A 692 9.731 4.160 14.242 1.00 0.00 H -HETATM 2089 H2 HOH A 692 10.193 5.516 14.729 1.00 0.00 H -HETATM 2090 O HOH A 693 2.814 4.529 3.477 1.00 0.00 O -HETATM 2091 H1 HOH A 693 2.588 4.312 4.381 1.00 0.00 H -HETATM 2092 H2 HOH A 693 2.033 4.962 3.131 1.00 0.00 H -HETATM 2093 O HOH A 694 10.044 4.535 2.076 1.00 0.00 O -HETATM 2094 H1 HOH A 694 9.445 5.259 1.892 1.00 0.00 H -HETATM 2095 H2 HOH A 694 10.592 4.473 1.293 1.00 0.00 H -HETATM 2096 O HOH A 695 5.254 5.427 14.143 1.00 0.00 O -HETATM 2097 H1 HOH A 695 5.158 4.487 13.993 1.00 0.00 H -HETATM 2098 H2 HOH A 695 6.097 5.649 13.747 1.00 0.00 H -HETATM 2099 O HOH A 696 8.650 3.171 4.106 1.00 0.00 O -HETATM 2100 H1 HOH A 696 9.043 3.489 3.293 1.00 0.00 H -HETATM 2101 H2 HOH A 696 9.012 2.293 4.220 1.00 0.00 H -HETATM 2102 O HOH A 697 6.960 1.922 15.366 1.00 0.00 O -HETATM 2103 H1 HOH A 697 6.270 1.729 16.000 1.00 0.00 H -HETATM 2104 H2 HOH A 697 7.703 2.206 15.898 1.00 0.00 H -HETATM 2105 O HOH A 698 9.236 5.762 8.201 1.00 0.00 O -HETATM 2106 H1 HOH A 698 8.504 6.271 8.550 1.00 0.00 H -HETATM 2107 H2 HOH A 698 8.838 4.945 7.900 1.00 0.00 H -HETATM 2108 O HOH A 699 5.674 2.437 6.606 1.00 0.00 O -HETATM 2109 H1 HOH A 699 5.677 1.996 5.757 1.00 0.00 H -HETATM 2110 H2 HOH A 699 6.569 2.759 6.714 1.00 0.00 H -HETATM 2111 O HOH A 700 5.975 6.498 8.353 1.00 0.00 O -HETATM 2112 H1 HOH A 700 6.342 6.023 9.099 1.00 0.00 H -HETATM 2113 H2 HOH A 700 5.785 7.372 8.694 1.00 0.00 H -HETATM 2114 O HOH A 701 3.764 5.538 10.671 1.00 0.00 O -HETATM 2115 H1 HOH A 701 3.460 6.418 10.896 1.00 0.00 H -HETATM 2116 H2 HOH A 701 4.719 5.598 10.707 1.00 0.00 H -HETATM 2117 O HOH A 702 13.051 8.741 7.061 1.00 0.00 O -HETATM 2118 H1 HOH A 702 13.771 9.237 6.670 1.00 0.00 H -HETATM 2119 H2 HOH A 702 12.850 8.063 6.416 1.00 0.00 H -HETATM 2120 O HOH A 703 8.433 8.812 12.948 1.00 0.00 O -HETATM 2121 H1 HOH A 703 8.367 7.892 12.693 1.00 0.00 H -HETATM 2122 H2 HOH A 703 7.804 8.910 13.662 1.00 0.00 H -HETATM 2123 O HOH A 704 2.336 9.413 4.906 1.00 0.00 O -HETATM 2124 H1 HOH A 704 2.854 8.609 4.852 1.00 0.00 H -HETATM 2125 H2 HOH A 704 1.885 9.351 5.748 1.00 0.00 H -HETATM 2126 O HOH A 705 3.022 6.837 14.702 1.00 0.00 O -HETATM 2127 H1 HOH A 705 2.722 6.983 13.805 1.00 0.00 H -HETATM 2128 H2 HOH A 705 3.793 6.278 14.610 1.00 0.00 H -HETATM 2129 O HOH A 706 8.365 11.634 12.698 1.00 0.00 O -HETATM 2130 H1 HOH A 706 8.379 10.702 12.480 1.00 0.00 H -HETATM 2131 H2 HOH A 706 7.657 11.720 13.337 1.00 0.00 H -HETATM 2132 O HOH A 707 14.576 8.275 12.045 1.00 0.00 O -HETATM 2133 H1 HOH A 707 13.851 8.868 11.848 1.00 0.00 H -HETATM 2134 H2 HOH A 707 15.104 8.267 11.246 1.00 0.00 H -HETATM 2135 O HOH A 708 10.106 10.001 5.543 1.00 0.00 O -HETATM 2136 H1 HOH A 708 10.458 9.404 4.883 1.00 0.00 H -HETATM 2137 H2 HOH A 708 9.222 9.675 5.714 1.00 0.00 H -HETATM 2138 O HOH A 709 6.192 10.761 2.950 1.00 0.00 O -HETATM 2139 H1 HOH A 709 6.880 11.308 3.331 1.00 0.00 H -HETATM 2140 H2 HOH A 709 5.406 11.305 2.985 1.00 0.00 H -HETATM 2141 O HOH A 710 5.495 7.765 2.563 1.00 0.00 O -HETATM 2142 H1 HOH A 710 5.951 8.576 2.789 1.00 0.00 H -HETATM 2143 H2 HOH A 710 5.144 7.447 3.395 1.00 0.00 H -HETATM 2144 O HOH A 711 7.798 13.276 9.792 1.00 0.00 O -HETATM 2145 H1 HOH A 711 8.443 13.482 10.469 1.00 0.00 H -HETATM 2146 H2 HOH A 711 8.161 12.515 9.339 1.00 0.00 H -HETATM 2147 O HOH A 712 9.072 11.279 8.510 1.00 0.00 O -HETATM 2148 H1 HOH A 712 9.714 10.578 8.623 1.00 0.00 H -HETATM 2149 H2 HOH A 712 9.597 12.059 8.329 1.00 0.00 H -HETATM 2150 O HOH A 713 10.845 12.079 11.713 1.00 0.00 O -HETATM 2151 H1 HOH A 713 11.181 12.665 12.391 1.00 0.00 H -HETATM 2152 H2 HOH A 713 9.925 11.948 11.943 1.00 0.00 H -HETATM 2153 O HOH A 714 6.674 12.128 14.882 1.00 0.00 O -HETATM 2154 H1 HOH A 714 6.354 11.409 15.427 1.00 0.00 H -HETATM 2155 H2 HOH A 714 6.000 12.803 14.956 1.00 0.00 H -HETATM 2156 O HOH A 715 9.890 2.360 10.246 1.00 0.00 O -HETATM 2157 H1 HOH A 715 10.258 1.540 10.574 1.00 0.00 H -HETATM 2158 H2 HOH A 715 9.029 2.420 10.661 1.00 0.00 H -HETATM 2159 O HOH A 716 5.224 3.595 2.470 1.00 0.00 O -HETATM 2160 H1 HOH A 716 4.516 4.063 2.912 1.00 0.00 H -HETATM 2161 H2 HOH A 716 5.509 2.937 3.105 1.00 0.00 H -HETATM 2162 O HOH A 717 6.850 5.014 10.470 1.00 0.00 O -HETATM 2163 H1 HOH A 717 7.348 5.489 11.135 1.00 0.00 H -HETATM 2164 H2 HOH A 717 6.992 4.091 10.677 1.00 0.00 H -HETATM 2165 O HOH A 718 6.343 15.555 3.183 1.00 0.00 O -HETATM 2166 H1 HOH A 718 6.598 15.517 2.261 1.00 0.00 H -HETATM 2167 H2 HOH A 718 5.395 15.429 3.176 1.00 0.00 H -HETATM 2168 O HOH A 719 12.349 6.474 4.759 1.00 0.00 O -HETATM 2169 H1 HOH A 719 11.408 6.489 4.933 1.00 0.00 H -HETATM 2170 H2 HOH A 719 12.663 5.688 5.205 1.00 0.00 H -HETATM 2171 O HOH A 720 14.351 13.645 6.434 1.00 0.00 O -HETATM 2172 H1 HOH A 720 14.476 14.468 6.906 1.00 0.00 H -HETATM 2173 H2 HOH A 720 15.218 13.434 6.086 1.00 0.00 H -HETATM 2174 O HOH A 721 1.823 15.738 6.106 1.00 0.00 O -HETATM 2175 H1 HOH A 721 2.559 15.190 6.377 1.00 0.00 H -HETATM 2176 H2 HOH A 721 2.207 16.604 5.966 1.00 0.00 H -HETATM 2177 O HOH A 722 9.665 11.031 15.242 1.00 0.00 O -HETATM 2178 H1 HOH A 722 9.059 11.054 14.501 1.00 0.00 H -HETATM 2179 H2 HOH A 722 9.361 10.299 15.779 1.00 0.00 H -HETATM 2180 O HOH A 723 11.095 14.759 13.853 1.00 0.00 O -HETATM 2181 H1 HOH A 723 12.047 14.675 13.803 1.00 0.00 H -HETATM 2182 H2 HOH A 723 10.948 15.423 14.526 1.00 0.00 H -HETATM 2183 O HOH A 724 5.602 8.817 13.771 1.00 0.00 O -HETATM 2184 H1 HOH A 724 4.837 9.386 13.687 1.00 0.00 H -HETATM 2185 H2 HOH A 724 5.784 8.525 12.878 1.00 0.00 H -HETATM 2186 O HOH A 725 12.745 10.548 14.329 1.00 0.00 O -HETATM 2187 H1 HOH A 725 13.486 10.886 13.826 1.00 0.00 H -HETATM 2188 H2 HOH A 725 11.982 10.717 13.776 1.00 0.00 H -HETATM 2189 O HOH A 726 2.521 4.132 13.100 1.00 0.00 O -HETATM 2190 H1 HOH A 726 1.991 3.642 12.473 1.00 0.00 H -HETATM 2191 H2 HOH A 726 3.190 4.561 12.566 1.00 0.00 H -HETATM 2192 O HOH A 727 11.419 8.599 12.864 1.00 0.00 O -HETATM 2193 H1 HOH A 727 11.833 8.754 13.714 1.00 0.00 H -HETATM 2194 H2 HOH A 727 10.484 8.725 13.027 1.00 0.00 H -HETATM 2195 O HOH A 728 11.891 5.939 14.868 1.00 0.00 O -HETATM 2196 H1 HOH A 728 12.474 5.184 14.780 1.00 0.00 H -HETATM 2197 H2 HOH A 728 12.068 6.470 14.092 1.00 0.00 H -HETATM 2198 O HOH A 729 6.181 8.551 10.834 1.00 0.00 O -HETATM 2199 H1 HOH A 729 6.600 9.395 10.662 1.00 0.00 H -HETATM 2200 H2 HOH A 729 5.262 8.689 10.605 1.00 0.00 H -HETATM 2201 O HOH A 730 8.517 6.283 12.218 1.00 0.00 O -HETATM 2202 H1 HOH A 730 8.637 5.687 12.957 1.00 0.00 H -HETATM 2203 H2 HOH A 730 9.377 6.320 11.798 1.00 0.00 H -HETATM 2204 O HOH A 731 10.856 6.837 10.794 1.00 0.00 O -HETATM 2205 H1 HOH A 731 10.329 7.361 10.191 1.00 0.00 H -HETATM 2206 H2 HOH A 731 11.199 7.470 11.425 1.00 0.00 H -HETATM 2207 O HOH A 732 4.032 14.857 11.950 1.00 0.00 O -HETATM 2208 H1 HOH A 732 3.494 15.581 11.631 1.00 0.00 H -HETATM 2209 H2 HOH A 732 4.285 14.380 11.160 1.00 0.00 H -HETATM 2210 O HOH A 733 5.284 2.825 13.475 1.00 0.00 O -HETATM 2211 H1 HOH A 733 5.874 2.517 14.163 1.00 0.00 H -HETATM 2212 H2 HOH A 733 4.466 2.353 13.631 1.00 0.00 H -HETATM 2213 O HOH A 734 10.103 2.442 13.709 1.00 0.00 O -HETATM 2214 H1 HOH A 734 9.415 1.780 13.644 1.00 0.00 H -HETATM 2215 H2 HOH A 734 10.824 1.996 14.154 1.00 0.00 H -HETATM 2216 O HOH A 735 6.888 16.092 12.208 1.00 0.00 O -HETATM 2217 H1 HOH A 735 6.814 16.995 12.516 1.00 0.00 H -HETATM 2218 H2 HOH A 735 5.986 15.773 12.181 1.00 0.00 H -HETATM 2219 O HOH A 736 2.887 11.750 3.172 1.00 0.00 O -HETATM 2220 H1 HOH A 736 2.586 11.627 4.072 1.00 0.00 H -HETATM 2221 H2 HOH A 736 2.780 10.891 2.764 1.00 0.00 H -HETATM 2222 O HOH A 737 16.118 9.130 5.222 1.00 0.00 O -HETATM 2223 H1 HOH A 737 16.488 8.346 4.816 1.00 0.00 H -HETATM 2224 H2 HOH A 737 16.758 9.819 5.044 1.00 0.00 H -HETATM 2225 O HOH A 738 13.101 10.513 10.635 1.00 0.00 O -HETATM 2226 H1 HOH A 738 12.287 10.943 10.898 1.00 0.00 H -HETATM 2227 H2 HOH A 738 13.508 11.125 10.022 1.00 0.00 H -HETATM 2228 O HOH A 739 15.060 6.505 2.528 1.00 0.00 O -HETATM 2229 H1 HOH A 739 14.684 5.738 2.096 1.00 0.00 H -HETATM 2230 H2 HOH A 739 14.330 6.887 3.016 1.00 0.00 H -HETATM 2231 O HOH A 740 14.450 5.652 12.162 1.00 0.00 O -HETATM 2232 H1 HOH A 740 14.219 5.423 11.262 1.00 0.00 H -HETATM 2233 H2 HOH A 740 14.710 6.572 12.117 1.00 0.00 H -HETATM 2234 O HOH A 741 14.335 4.731 5.829 1.00 0.00 O -HETATM 2235 H1 HOH A 741 14.859 4.237 5.198 1.00 0.00 H -HETATM 2236 H2 HOH A 741 14.921 4.866 6.574 1.00 0.00 H -HETATM 2237 O HOH A 742 14.514 4.815 9.351 1.00 0.00 O -HETATM 2238 H1 HOH A 742 13.564 4.781 9.466 1.00 0.00 H -HETATM 2239 H2 HOH A 742 14.695 5.725 9.116 1.00 0.00 H -HETATM 2240 O HOH A 743 13.825 3.988 1.768 1.00 0.00 O -HETATM 2241 H1 HOH A 743 14.321 3.755 2.553 1.00 0.00 H -HETATM 2242 H2 HOH A 743 13.627 3.149 1.352 1.00 0.00 H -HETATM 2243 O HOH A 744 15.254 2.624 4.302 1.00 0.00 O -HETATM 2244 H1 HOH A 744 15.144 2.470 5.240 1.00 0.00 H -HETATM 2245 H2 HOH A 744 16.015 2.096 4.060 1.00 0.00 H -HETATM 2246 O HOH A 745 13.158 15.265 4.162 1.00 0.00 O -HETATM 2247 H1 HOH A 745 13.754 14.944 3.486 1.00 0.00 H -HETATM 2248 H2 HOH A 745 13.416 14.792 4.954 1.00 0.00 H -HETATM 2249 O HOH A 746 4.765 13.253 9.912 1.00 0.00 O -HETATM 2250 H1 HOH A 746 4.524 13.520 9.025 1.00 0.00 H -HETATM 2251 H2 HOH A 746 5.706 13.424 9.967 1.00 0.00 H -HETATM 2252 O HOH A 747 16.026 15.272 10.713 1.00 0.00 O -HETATM 2253 H1 HOH A 747 15.532 15.669 9.996 1.00 0.00 H -HETATM 2254 H2 HOH A 747 15.417 14.647 11.107 1.00 0.00 H -HETATM 2255 O HOH A 748 13.710 15.915 7.992 1.00 0.00 O -HETATM 2256 H1 HOH A 748 13.250 16.666 7.618 1.00 0.00 H -HETATM 2257 H2 HOH A 748 13.081 15.195 7.933 1.00 0.00 H -HETATM 2258 O HOH A 749 4.139 14.224 7.167 1.00 0.00 O -HETATM 2259 H1 HOH A 749 4.656 13.612 6.642 1.00 0.00 H -HETATM 2260 H2 HOH A 749 4.789 14.726 7.658 1.00 0.00 H -HETATM 2261 O HOH A 750 6.879 15.114 7.994 1.00 0.00 O -HETATM 2262 H1 HOH A 750 7.167 14.860 7.117 1.00 0.00 H -HETATM 2263 H2 HOH A 750 7.391 14.562 8.584 1.00 0.00 H -HETATM 2264 O HOH A 751 6.946 16.036 15.360 1.00 0.00 O -HETATM 2265 H1 HOH A 751 7.873 15.800 15.404 1.00 0.00 H -HETATM 2266 H2 HOH A 751 6.931 16.863 14.879 1.00 0.00 H -HETATM 2267 O HOH A 752 15.181 15.579 2.358 1.00 0.00 O -HETATM 2268 H1 HOH A 752 15.356 14.892 1.714 1.00 0.00 H -HETATM 2269 H2 HOH A 752 14.483 16.103 1.966 1.00 0.00 H -TER 2270 HOH A 752 -CONECT 1 2 -CONECT 2 3 4 1 5 -CONECT 3 2 -CONECT 4 2 -CONECT 5 6 7 2 -CONECT 6 5 -CONECT 7 5 -CONECT 15 17 -CONECT 17 18 15 19 -CONECT 18 17 -CONECT 19 20 21 22 17 -CONECT 20 19 -CONECT 21 19 -CONECT 22 19 -END diff --git a/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.csv b/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.csv deleted file mode 100644 index 1230fcc..0000000 --- a/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.csv +++ /dev/null @@ -1,3 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -1,0.001,-2346110.0092633683,-2346086.2420784095,119.10563782230643,0.033122434853216545,0 -2,0.002,-2346113.3909082008,-2346055.3409273475,290.9086628073107,0.033122434853216545,1.76 diff --git a/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.dcd b/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.dcd deleted file mode 100644 index b54a58f..0000000 Binary files a/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.pdb b/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.pdb deleted file mode 100644 index 45fdbf9..0000000 --- a/test_stability_protocol/vacuum_ZINC00077329_ani2x_nnpops.pdb +++ /dev/null @@ -1,35 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-10-21 -HETATM 1 C1x UNK A 1 -2.760 -0.691 0.360 1.00 0.00 C -HETATM 2 N1x UNK A 1 -1.474 -0.074 0.100 1.00 0.00 N -HETATM 3 C2x UNK A 1 -1.337 1.183 -0.371 1.00 0.00 C -HETATM 4 C3x UNK A 1 0.010 1.388 -0.480 1.00 0.00 C -HETATM 5 Cl1x UNK A 1 0.802 2.864 -1.049 1.00 0.00 Cl -HETATM 6 C4x UNK A 1 0.661 0.245 -0.070 1.00 0.00 C -HETATM 7 C5x UNK A 1 2.099 0.036 -0.026 1.00 0.00 C -HETATM 8 N2x UNK A 1 2.653 -1.053 0.367 1.00 0.00 N -HETATM 9 O1x UNK A 1 4.013 -1.252 0.409 1.00 0.00 O -HETATM 10 N3x UNK A 1 -0.311 -0.639 0.283 1.00 0.00 N -HETATM 11 H1x UNK A 1 -3.506 -0.468 -0.439 1.00 0.00 H -HETATM 12 H2x UNK A 1 -2.639 -1.787 0.372 1.00 0.00 H -HETATM 13 H3x UNK A 1 -3.174 -0.276 1.297 1.00 0.00 H -HETATM 14 H4x UNK A 1 -2.094 1.899 -0.621 1.00 0.00 H -HETATM 15 H5x UNK A 1 2.739 0.838 -0.340 1.00 0.00 H -HETATM 16 H6x UNK A 1 4.317 -2.215 0.208 1.00 0.00 H -TER 17 UNK A 1 -CONECT 1 2 11 12 13 -CONECT 2 1 3 10 -CONECT 3 2 4 14 -CONECT 4 3 5 6 -CONECT 5 4 -CONECT 6 4 7 10 -CONECT 7 6 8 15 -CONECT 8 7 9 -CONECT 9 8 16 -CONECT 10 6 2 -CONECT 11 1 -CONECT 12 1 -CONECT 13 1 -CONECT 14 3 -CONECT 15 7 -CONECT 16 9 -END diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.csv b/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.csv deleted file mode 100644 index 8a28fd8..0000000 --- a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.csv +++ /dev/null @@ -1,4 +0,0 @@ -50,0.05000000000000004,-1397029.1062277576,-1397015.0296730476,53.74667891635695,0.032000088536621986,0 -100,0.10000000000000007,-1397018.3445486128,-1396986.4494221224,121.78101515487664,0.032000088536621986,0.147 -150,0.1500000000000001,-1397005.5700305842,-1396956.1774365955,188.5893206563763,0.032000088536621986,0.271 -200,0.20000000000000015,-1397000.9741743116,-1396929.0279767045,274.7028134150743,0.032000088536621986,0.383 diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.dcd b/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.dcd deleted file mode 100644 index 1af49ed..0000000 Binary files a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.pdb b/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.pdb deleted file mode 100644 index d0ce402..0000000 --- a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_nnpops.pdb +++ /dev/null @@ -1,45 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-24 -HETATM 1 C1x UNK A 1 -1.922 -1.713 0.259 1.00 0.00 C -HETATM 2 C2x UNK A 1 -1.436 -0.313 0.181 1.00 0.00 C -HETATM 3 N1x UNK A 1 -2.290 0.651 0.241 1.00 0.00 N -HETATM 4 O1x UNK A 1 -3.614 0.330 0.375 1.00 0.00 O -HETATM 5 C3x UNK A 1 -0.005 -0.022 0.039 1.00 0.00 C -HETATM 6 O2x UNK A 1 0.931 -0.947 -0.030 1.00 0.00 O -HETATM 7 C4x UNK A 1 2.115 -0.405 -0.154 1.00 0.00 C -HETATM 8 C5x UNK A 1 3.429 -1.129 -0.263 1.00 0.00 C -HETATM 9 N2x UNK A 1 1.925 0.927 -0.166 1.00 0.00 N -HETATM 10 C6x UNK A 1 0.609 1.211 -0.047 1.00 0.00 C -HETATM 11 C7x UNK A 1 -0.068 2.535 -0.012 1.00 0.00 C -HETATM 12 H1x UNK A 1 -2.715 -1.849 1.002 1.00 0.00 H -HETATM 13 H2x UNK A 1 -2.301 -2.010 -0.758 1.00 0.00 H -HETATM 14 H3x UNK A 1 -1.061 -2.398 0.513 1.00 0.00 H -HETATM 15 H4x UNK A 1 -4.214 0.535 -0.413 1.00 0.00 H -HETATM 16 H5x UNK A 1 3.203 -2.188 -0.487 1.00 0.00 H -HETATM 17 H6x UNK A 1 3.960 -1.116 0.712 1.00 0.00 H -HETATM 18 H7x UNK A 1 4.083 -0.651 -0.995 1.00 0.00 H -HETATM 19 H8x UNK A 1 -0.987 2.459 -0.593 1.00 0.00 H -HETATM 20 H9x UNK A 1 -0.306 2.825 1.042 1.00 0.00 H -HETATM 21 H10x UNK A 1 0.664 3.267 -0.446 1.00 0.00 H -TER 22 UNK A 1 -CONECT 1 2 12 13 14 -CONECT 2 1 3 5 -CONECT 3 2 4 -CONECT 4 3 15 -CONECT 5 2 6 10 -CONECT 6 5 7 -CONECT 7 6 8 9 -CONECT 8 7 16 17 18 -CONECT 9 7 10 -CONECT 10 9 11 5 -CONECT 11 10 19 20 21 -CONECT 12 1 -CONECT 13 1 -CONECT 14 1 -CONECT 15 4 -CONECT 16 8 -CONECT 17 8 -CONECT 18 8 -CONECT 19 11 -CONECT 20 11 -CONECT 21 11 -END diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.csv b/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.csv deleted file mode 100644 index 309c13b..0000000 --- a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.csv +++ /dev/null @@ -1,4 +0,0 @@ -50,0.05000000000000004,-1397032.835001129,-1397018.2536723982,55.67399193966186,0.032000088536621986,0 -100,0.10000000000000007,-1397025.013336687,-1396993.7411873601,119.40238243863648,0.032000088536621986,0.144 -150,0.1500000000000001,-1397008.1909581537,-1396967.186841252,156.56068908640583,0.032000088536621986,0.265 -200,0.20000000000000015,-1397003.9401275592,-1396943.3422659412,231.37293737610472,0.032000088536621986,0.374 diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.dcd b/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.dcd deleted file mode 100644 index 85ff338..0000000 Binary files a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.pdb b/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.pdb deleted file mode 100644 index d0ce402..0000000 --- a/test_stability_protocol/vacuum_ZINC00107550_ani1ccx_torchani.pdb +++ /dev/null @@ -1,45 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-24 -HETATM 1 C1x UNK A 1 -1.922 -1.713 0.259 1.00 0.00 C -HETATM 2 C2x UNK A 1 -1.436 -0.313 0.181 1.00 0.00 C -HETATM 3 N1x UNK A 1 -2.290 0.651 0.241 1.00 0.00 N -HETATM 4 O1x UNK A 1 -3.614 0.330 0.375 1.00 0.00 O -HETATM 5 C3x UNK A 1 -0.005 -0.022 0.039 1.00 0.00 C -HETATM 6 O2x UNK A 1 0.931 -0.947 -0.030 1.00 0.00 O -HETATM 7 C4x UNK A 1 2.115 -0.405 -0.154 1.00 0.00 C -HETATM 8 C5x UNK A 1 3.429 -1.129 -0.263 1.00 0.00 C -HETATM 9 N2x UNK A 1 1.925 0.927 -0.166 1.00 0.00 N -HETATM 10 C6x UNK A 1 0.609 1.211 -0.047 1.00 0.00 C -HETATM 11 C7x UNK A 1 -0.068 2.535 -0.012 1.00 0.00 C -HETATM 12 H1x UNK A 1 -2.715 -1.849 1.002 1.00 0.00 H -HETATM 13 H2x UNK A 1 -2.301 -2.010 -0.758 1.00 0.00 H -HETATM 14 H3x UNK A 1 -1.061 -2.398 0.513 1.00 0.00 H -HETATM 15 H4x UNK A 1 -4.214 0.535 -0.413 1.00 0.00 H -HETATM 16 H5x UNK A 1 3.203 -2.188 -0.487 1.00 0.00 H -HETATM 17 H6x UNK A 1 3.960 -1.116 0.712 1.00 0.00 H -HETATM 18 H7x UNK A 1 4.083 -0.651 -0.995 1.00 0.00 H -HETATM 19 H8x UNK A 1 -0.987 2.459 -0.593 1.00 0.00 H -HETATM 20 H9x UNK A 1 -0.306 2.825 1.042 1.00 0.00 H -HETATM 21 H10x UNK A 1 0.664 3.267 -0.446 1.00 0.00 H -TER 22 UNK A 1 -CONECT 1 2 12 13 14 -CONECT 2 1 3 5 -CONECT 3 2 4 -CONECT 4 3 15 -CONECT 5 2 6 10 -CONECT 6 5 7 -CONECT 7 6 8 9 -CONECT 8 7 16 17 18 -CONECT 9 7 10 -CONECT 10 9 11 5 -CONECT 11 10 19 20 21 -CONECT 12 1 -CONECT 13 1 -CONECT 14 1 -CONECT 15 4 -CONECT 16 8 -CONECT 17 8 -CONECT 18 8 -CONECT 19 11 -CONECT 20 11 -CONECT 21 11 -END diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.csv b/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.csv deleted file mode 100644 index 0219a36..0000000 --- a/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.csv +++ /dev/null @@ -1,4 +0,0 @@ -50,0.05000000000000004,-1398149.590153445,-1398135.0619407855,55.47118575006774,0.032000088536621986,0 -100,0.10000000000000007,-1398141.6145400244,-1398101.2045396464,154.2922511981124,0.032000088536621986,0.036 -150,0.1500000000000001,-1398116.4984781344,-1398076.7415642615,151.79865589625783,0.032000088536621986,0.068 -200,0.20000000000000015,-1398115.3079263244,-1398044.9245814313,268.73557606609495,0.032000088536621986,0.0967 diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.dcd b/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.dcd deleted file mode 100644 index 1f5a0b8..0000000 Binary files a/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.pdb b/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.pdb deleted file mode 100644 index d0ce402..0000000 --- a/test_stability_protocol/vacuum_ZINC00107550_ani2x_nnpops.pdb +++ /dev/null @@ -1,45 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-24 -HETATM 1 C1x UNK A 1 -1.922 -1.713 0.259 1.00 0.00 C -HETATM 2 C2x UNK A 1 -1.436 -0.313 0.181 1.00 0.00 C -HETATM 3 N1x UNK A 1 -2.290 0.651 0.241 1.00 0.00 N -HETATM 4 O1x UNK A 1 -3.614 0.330 0.375 1.00 0.00 O -HETATM 5 C3x UNK A 1 -0.005 -0.022 0.039 1.00 0.00 C -HETATM 6 O2x UNK A 1 0.931 -0.947 -0.030 1.00 0.00 O -HETATM 7 C4x UNK A 1 2.115 -0.405 -0.154 1.00 0.00 C -HETATM 8 C5x UNK A 1 3.429 -1.129 -0.263 1.00 0.00 C -HETATM 9 N2x UNK A 1 1.925 0.927 -0.166 1.00 0.00 N -HETATM 10 C6x UNK A 1 0.609 1.211 -0.047 1.00 0.00 C -HETATM 11 C7x UNK A 1 -0.068 2.535 -0.012 1.00 0.00 C -HETATM 12 H1x UNK A 1 -2.715 -1.849 1.002 1.00 0.00 H -HETATM 13 H2x UNK A 1 -2.301 -2.010 -0.758 1.00 0.00 H -HETATM 14 H3x UNK A 1 -1.061 -2.398 0.513 1.00 0.00 H -HETATM 15 H4x UNK A 1 -4.214 0.535 -0.413 1.00 0.00 H -HETATM 16 H5x UNK A 1 3.203 -2.188 -0.487 1.00 0.00 H -HETATM 17 H6x UNK A 1 3.960 -1.116 0.712 1.00 0.00 H -HETATM 18 H7x UNK A 1 4.083 -0.651 -0.995 1.00 0.00 H -HETATM 19 H8x UNK A 1 -0.987 2.459 -0.593 1.00 0.00 H -HETATM 20 H9x UNK A 1 -0.306 2.825 1.042 1.00 0.00 H -HETATM 21 H10x UNK A 1 0.664 3.267 -0.446 1.00 0.00 H -TER 22 UNK A 1 -CONECT 1 2 12 13 14 -CONECT 2 1 3 5 -CONECT 3 2 4 -CONECT 4 3 15 -CONECT 5 2 6 10 -CONECT 6 5 7 -CONECT 7 6 8 9 -CONECT 8 7 16 17 18 -CONECT 9 7 10 -CONECT 10 9 11 5 -CONECT 11 10 19 20 21 -CONECT 12 1 -CONECT 13 1 -CONECT 14 1 -CONECT 15 4 -CONECT 16 8 -CONECT 17 8 -CONECT 18 8 -CONECT 19 11 -CONECT 20 11 -CONECT 21 11 -END diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.csv b/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.csv deleted file mode 100644 index a246078..0000000 --- a/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.csv +++ /dev/null @@ -1,4 +0,0 @@ -50,0.05000000000000004,-1398153.2772217055,-1398137.0289770027,62.03856049931308,0.032000088536621986,0 -100,0.10000000000000007,-1398136.979071721,-1398101.01791255,137.30581916108758,0.032000088536621986,0.0462 -150,0.1500000000000001,-1398116.431069217,-1398062.6842099268,205.2146458092691,0.032000088536621986,0.0858 -200,0.20000000000000015,-1398109.7539283836,-1398041.4725189554,260.7100291294708,0.032000088536621986,0.121 diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.dcd b/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.dcd deleted file mode 100644 index aaa1db3..0000000 Binary files a/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.pdb b/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.pdb deleted file mode 100644 index d0ce402..0000000 --- a/test_stability_protocol/vacuum_ZINC00107550_ani2x_torchani.pdb +++ /dev/null @@ -1,45 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-24 -HETATM 1 C1x UNK A 1 -1.922 -1.713 0.259 1.00 0.00 C -HETATM 2 C2x UNK A 1 -1.436 -0.313 0.181 1.00 0.00 C -HETATM 3 N1x UNK A 1 -2.290 0.651 0.241 1.00 0.00 N -HETATM 4 O1x UNK A 1 -3.614 0.330 0.375 1.00 0.00 O -HETATM 5 C3x UNK A 1 -0.005 -0.022 0.039 1.00 0.00 C -HETATM 6 O2x UNK A 1 0.931 -0.947 -0.030 1.00 0.00 O -HETATM 7 C4x UNK A 1 2.115 -0.405 -0.154 1.00 0.00 C -HETATM 8 C5x UNK A 1 3.429 -1.129 -0.263 1.00 0.00 C -HETATM 9 N2x UNK A 1 1.925 0.927 -0.166 1.00 0.00 N -HETATM 10 C6x UNK A 1 0.609 1.211 -0.047 1.00 0.00 C -HETATM 11 C7x UNK A 1 -0.068 2.535 -0.012 1.00 0.00 C -HETATM 12 H1x UNK A 1 -2.715 -1.849 1.002 1.00 0.00 H -HETATM 13 H2x UNK A 1 -2.301 -2.010 -0.758 1.00 0.00 H -HETATM 14 H3x UNK A 1 -1.061 -2.398 0.513 1.00 0.00 H -HETATM 15 H4x UNK A 1 -4.214 0.535 -0.413 1.00 0.00 H -HETATM 16 H5x UNK A 1 3.203 -2.188 -0.487 1.00 0.00 H -HETATM 17 H6x UNK A 1 3.960 -1.116 0.712 1.00 0.00 H -HETATM 18 H7x UNK A 1 4.083 -0.651 -0.995 1.00 0.00 H -HETATM 19 H8x UNK A 1 -0.987 2.459 -0.593 1.00 0.00 H -HETATM 20 H9x UNK A 1 -0.306 2.825 1.042 1.00 0.00 H -HETATM 21 H10x UNK A 1 0.664 3.267 -0.446 1.00 0.00 H -TER 22 UNK A 1 -CONECT 1 2 12 13 14 -CONECT 2 1 3 5 -CONECT 3 2 4 -CONECT 4 3 15 -CONECT 5 2 6 10 -CONECT 6 5 7 -CONECT 7 6 8 9 -CONECT 8 7 16 17 18 -CONECT 9 7 10 -CONECT 10 9 11 5 -CONECT 11 10 19 20 21 -CONECT 12 1 -CONECT 13 1 -CONECT 14 1 -CONECT 15 4 -CONECT 16 8 -CONECT 17 8 -CONECT 18 8 -CONECT 19 11 -CONECT 20 11 -CONECT 21 11 -END diff --git a/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.csv b/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.csv deleted file mode 100644 index 0eed0c5..0000000 --- a/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.csv +++ /dev/null @@ -1,101 +0,0 @@ -bond distance [A],potential energy [kJ/mol] -0.0,-405443.4121280159 -0.08080808080808081,-404959.55123111204 -0.16161616161616163,-404921.71679268894 -0.24242424242424243,-404929.43419435347 -0.32323232323232326,-404998.03683263616 -0.4040404040404041,-405151.0557795981 -0.48484848484848486,-405391.33590282226 -0.5656565656565657,-405712.188109401 -0.6464646464646465,-406094.78344159556 -0.7272727272727273,-406409.5463498772 -0.8080808080808082,-406568.3535534832 -0.888888888888889,-406632.85161270126 -0.9696969696969697,-406645.6011898216 -1.0505050505050506,-406628.19068511 -1.1313131313131315,-406593.32810750627 -1.2121212121212122,-406551.2097013134 -1.292929292929293,-406505.67356926034 -1.373737373737374,-406459.933718585 -1.4545454545454546,-406416.1862260594 -1.5353535353535355,-406376.7349516909 -1.6161616161616164,-406341.289734909 -1.696969696969697,-406310.9128823518 -1.777777777777778,-406285.76387890143 -1.8585858585858588,-406264.0568185969 -1.9393939393939394,-406246.2994396456 -2.0202020202020203,-406232.16383267904 -2.101010101010101,-406222.4225398849 -2.181818181818182,-406218.8689005932 -2.262626262626263,-406223.10738788324 -2.3434343434343434,-406237.07490290893 -2.4242424242424243,-406260.58205125964 -2.505050505050505,-406290.6639946932 -2.585858585858586,-406323.48732539243 -2.666666666666667,-406356.6626554435 -2.747474747474748,-406388.4300761142 -2.8282828282828287,-406416.80355755193 -2.909090909090909,-406440.72181031655 -2.98989898989899,-406460.4624609495 -3.070707070707071,-406476.97472129576 -3.151515151515152,-406491.05427968403 -3.2323232323232327,-406502.8025661423 -3.3131313131313136,-406511.7754711214 -3.393939393939394,-406518.1222317247 -3.474747474747475,-406522.5567790054 -3.555555555555556,-406525.4043326265 -3.6363636363636367,-406526.7980635895 -3.7171717171717176,-406527.5200967703 -3.7979797979797985,-406528.38851841143 -3.878787878787879,-406529.70819321583 -3.95959595959596,-406531.23372832075 -4.040404040404041,-406532.552173196 -4.121212121212122,-406533.51285785873 -4.202020202020202,-406534.1723125892 -4.282828282828283,-406534.57442849537 -4.363636363636364,-406534.70681336924 -4.444444444444445,-406534.63409839576 -4.525252525252526,-406534.46668132656 -4.606060606060606,-406534.28920964804 -4.686868686868687,-406534.20331756136 -4.767676767676768,-406534.3346485596 -4.848484848484849,-406534.7302358163 -4.92929292929293,-406535.27375444636 -5.01010101010101,-406535.7466414023 -5.090909090909092,-406536.00508545106 -5.171717171717172,-406536.0768101238 -5.252525252525253,-406536.0796318697 -5.333333333333334,-406536.0796318697 -5.414141414141414,-406536.0796318697 -5.494949494949496,-406536.0796318697 -5.575757575757576,-406536.0796318697 -5.6565656565656575,-406536.0796318697 -5.737373737373738,-406536.0796318697 -5.818181818181818,-406536.0796318697 -5.8989898989899,-406536.0796318697 -5.97979797979798,-406536.0796318697 -6.060606060606061,-406536.0796318697 -6.141414141414142,-406536.0796318697 -6.222222222222222,-406536.0796318697 -6.303030303030304,-406536.0796318697 -6.383838383838384,-406536.0796318697 -6.464646464646465,-406536.0796318697 -6.545454545454546,-406536.0796318697 -6.626262626262627,-406536.0796318697 -6.707070707070708,-406536.0796318697 -6.787878787878788,-406536.0796318697 -6.868686868686869,-406536.0796318697 -6.94949494949495,-406536.0796318697 -7.030303030303031,-406536.0796318697 -7.111111111111112,-406536.0796318697 -7.191919191919193,-406536.0796318697 -7.272727272727273,-406536.0796318697 -7.353535353535354,-406536.0796318697 -7.434343434343435,-406536.0796318697 -7.515151515151516,-406536.0796318697 -7.595959595959597,-406536.0796318697 -7.676767676767677,-406536.0796318697 -7.757575757575758,-406536.0796318697 -7.838383838383839,-406536.0796318697 -7.91919191919192,-406536.0796318697 -8.0,-406536.0796318697 diff --git a/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.dcd b/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.dcd deleted file mode 100644 index c07f7aa..0000000 Binary files a/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.pdb b/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.pdb deleted file mode 100644 index 7e3245b..0000000 --- a/test_stability_protocol/vacuum_ethanol_ani1ccx_nnpops.pdb +++ /dev/null @@ -1,21 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -HETATM 1 O1x UNK A 1 1.410 0.566 -0.266 1.00 0.00 O -HETATM 2 C1x UNK A 1 0.458 -0.318 0.200 1.00 0.00 C -HETATM 3 C2x UNK A 1 -0.956 0.211 0.057 1.00 0.00 C -HETATM 4 H1x UNK A 1 1.732 0.251 -1.133 1.00 0.00 H -HETATM 5 H2x UNK A 1 0.660 -0.460 1.293 1.00 0.00 H -HETATM 6 H3x UNK A 1 0.568 -1.306 -0.296 1.00 0.00 H -HETATM 7 H4x UNK A 1 -1.089 0.835 -0.846 1.00 0.00 H -HETATM 8 H5x UNK A 1 -1.627 -0.670 0.064 1.00 0.00 H -HETATM 9 H6x UNK A 1 -1.154 0.890 0.926 1.00 0.00 H -TER 10 UNK A 1 -CONECT 1 2 4 -CONECT 2 1 3 5 6 -CONECT 3 2 7 8 9 -CONECT 4 1 -CONECT 5 2 -CONECT 6 2 -CONECT 7 3 -CONECT 8 3 -CONECT 9 3 -END diff --git a/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.csv b/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.csv deleted file mode 100644 index 0eed0c5..0000000 --- a/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.csv +++ /dev/null @@ -1,101 +0,0 @@ -bond distance [A],potential energy [kJ/mol] -0.0,-405443.4121280159 -0.08080808080808081,-404959.55123111204 -0.16161616161616163,-404921.71679268894 -0.24242424242424243,-404929.43419435347 -0.32323232323232326,-404998.03683263616 -0.4040404040404041,-405151.0557795981 -0.48484848484848486,-405391.33590282226 -0.5656565656565657,-405712.188109401 -0.6464646464646465,-406094.78344159556 -0.7272727272727273,-406409.5463498772 -0.8080808080808082,-406568.3535534832 -0.888888888888889,-406632.85161270126 -0.9696969696969697,-406645.6011898216 -1.0505050505050506,-406628.19068511 -1.1313131313131315,-406593.32810750627 -1.2121212121212122,-406551.2097013134 -1.292929292929293,-406505.67356926034 -1.373737373737374,-406459.933718585 -1.4545454545454546,-406416.1862260594 -1.5353535353535355,-406376.7349516909 -1.6161616161616164,-406341.289734909 -1.696969696969697,-406310.9128823518 -1.777777777777778,-406285.76387890143 -1.8585858585858588,-406264.0568185969 -1.9393939393939394,-406246.2994396456 -2.0202020202020203,-406232.16383267904 -2.101010101010101,-406222.4225398849 -2.181818181818182,-406218.8689005932 -2.262626262626263,-406223.10738788324 -2.3434343434343434,-406237.07490290893 -2.4242424242424243,-406260.58205125964 -2.505050505050505,-406290.6639946932 -2.585858585858586,-406323.48732539243 -2.666666666666667,-406356.6626554435 -2.747474747474748,-406388.4300761142 -2.8282828282828287,-406416.80355755193 -2.909090909090909,-406440.72181031655 -2.98989898989899,-406460.4624609495 -3.070707070707071,-406476.97472129576 -3.151515151515152,-406491.05427968403 -3.2323232323232327,-406502.8025661423 -3.3131313131313136,-406511.7754711214 -3.393939393939394,-406518.1222317247 -3.474747474747475,-406522.5567790054 -3.555555555555556,-406525.4043326265 -3.6363636363636367,-406526.7980635895 -3.7171717171717176,-406527.5200967703 -3.7979797979797985,-406528.38851841143 -3.878787878787879,-406529.70819321583 -3.95959595959596,-406531.23372832075 -4.040404040404041,-406532.552173196 -4.121212121212122,-406533.51285785873 -4.202020202020202,-406534.1723125892 -4.282828282828283,-406534.57442849537 -4.363636363636364,-406534.70681336924 -4.444444444444445,-406534.63409839576 -4.525252525252526,-406534.46668132656 -4.606060606060606,-406534.28920964804 -4.686868686868687,-406534.20331756136 -4.767676767676768,-406534.3346485596 -4.848484848484849,-406534.7302358163 -4.92929292929293,-406535.27375444636 -5.01010101010101,-406535.7466414023 -5.090909090909092,-406536.00508545106 -5.171717171717172,-406536.0768101238 -5.252525252525253,-406536.0796318697 -5.333333333333334,-406536.0796318697 -5.414141414141414,-406536.0796318697 -5.494949494949496,-406536.0796318697 -5.575757575757576,-406536.0796318697 -5.6565656565656575,-406536.0796318697 -5.737373737373738,-406536.0796318697 -5.818181818181818,-406536.0796318697 -5.8989898989899,-406536.0796318697 -5.97979797979798,-406536.0796318697 -6.060606060606061,-406536.0796318697 -6.141414141414142,-406536.0796318697 -6.222222222222222,-406536.0796318697 -6.303030303030304,-406536.0796318697 -6.383838383838384,-406536.0796318697 -6.464646464646465,-406536.0796318697 -6.545454545454546,-406536.0796318697 -6.626262626262627,-406536.0796318697 -6.707070707070708,-406536.0796318697 -6.787878787878788,-406536.0796318697 -6.868686868686869,-406536.0796318697 -6.94949494949495,-406536.0796318697 -7.030303030303031,-406536.0796318697 -7.111111111111112,-406536.0796318697 -7.191919191919193,-406536.0796318697 -7.272727272727273,-406536.0796318697 -7.353535353535354,-406536.0796318697 -7.434343434343435,-406536.0796318697 -7.515151515151516,-406536.0796318697 -7.595959595959597,-406536.0796318697 -7.676767676767677,-406536.0796318697 -7.757575757575758,-406536.0796318697 -7.838383838383839,-406536.0796318697 -7.91919191919192,-406536.0796318697 -8.0,-406536.0796318697 diff --git a/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.dcd b/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.dcd deleted file mode 100644 index 2153d72..0000000 Binary files a/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.pdb b/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.pdb deleted file mode 100644 index 7e3245b..0000000 --- a/test_stability_protocol/vacuum_ethanol_ani1ccx_torchani.pdb +++ /dev/null @@ -1,21 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -HETATM 1 O1x UNK A 1 1.410 0.566 -0.266 1.00 0.00 O -HETATM 2 C1x UNK A 1 0.458 -0.318 0.200 1.00 0.00 C -HETATM 3 C2x UNK A 1 -0.956 0.211 0.057 1.00 0.00 C -HETATM 4 H1x UNK A 1 1.732 0.251 -1.133 1.00 0.00 H -HETATM 5 H2x UNK A 1 0.660 -0.460 1.293 1.00 0.00 H -HETATM 6 H3x UNK A 1 0.568 -1.306 -0.296 1.00 0.00 H -HETATM 7 H4x UNK A 1 -1.089 0.835 -0.846 1.00 0.00 H -HETATM 8 H5x UNK A 1 -1.627 -0.670 0.064 1.00 0.00 H -HETATM 9 H6x UNK A 1 -1.154 0.890 0.926 1.00 0.00 H -TER 10 UNK A 1 -CONECT 1 2 4 -CONECT 2 1 3 5 6 -CONECT 3 2 7 8 9 -CONECT 4 1 -CONECT 5 2 -CONECT 6 2 -CONECT 7 3 -CONECT 8 3 -CONECT 9 3 -END diff --git a/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.csv b/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.csv deleted file mode 100644 index 01590fb..0000000 --- a/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.csv +++ /dev/null @@ -1,51 +0,0 @@ -bond distance [A],potential energy [kJ/mol] -0.0,nan -0.20408163265306123,-404464.43984736444 -0.40816326530612246,-404534.83071942633 -0.6122448979591837,-405747.6899908183 -0.8163265306122449,-406677.86155518796 -1.0204081632653061,-406894.8493935408 -1.2244897959183674,-406881.695710132 -1.4285714285714286,-406797.82931424706 -1.6326530612244898,-406695.24758846726 -1.836734693877551,-406595.5692729397 -2.0408163265306123,-406494.50043820235 -2.2448979591836737,-406387.1940485848 -2.4489795918367347,-406298.19283807103 -2.6530612244897958,-406239.0960308471 -2.857142857142857,-406195.93789198337 -3.0612244897959187,-406161.0462459957 -3.2653061224489797,-406137.46932178637 -3.4693877551020407,-406117.4398358744 -3.673469387755102,-406106.013339704 -3.8775510204081636,-406121.3346081065 -4.081632653061225,-406157.2470121133 -4.285714285714286,-406210.00601178646 -4.4897959183673475,-406263.23124017124 -4.6938775510204085,-406288.44624411134 -4.8979591836734695,-406323.70243815094 -5.1020408163265305,-406364.21245896496 -5.3061224489795915,-406416.3524155147 -5.510204081632653,-406454.70652465825 -5.714285714285714,-406457.68965289975 -5.918367346938775,-406457.68965289975 -6.122448979591837,-406457.68965289975 -6.326530612244898,-406457.68965289975 -6.530612244897959,-406457.68965289975 -6.73469387755102,-406457.68965289975 -6.938775510204081,-406457.68965289975 -7.142857142857143,-406457.68965289975 -7.346938775510204,-406457.68965289975 -7.551020408163265,-406457.68965289975 -7.755102040816327,-406457.68965289975 -7.959183673469388,-406457.68965289975 -8.16326530612245,-406457.68965289975 -8.36734693877551,-406457.68965289975 -8.571428571428571,-406457.68965289975 -8.775510204081632,-406457.68965289975 -8.979591836734695,-406457.68965289975 -9.183673469387756,-406457.68965289975 -9.387755102040817,-406457.68965289975 -9.591836734693878,-406457.68965289975 -9.795918367346939,-406457.68965289975 -10.0,-406457.68965289975 diff --git a/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.dcd b/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.dcd deleted file mode 100644 index 9ef6488..0000000 Binary files a/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.pdb b/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.pdb deleted file mode 100644 index 1d077b8..0000000 --- a/test_stability_protocol/vacuum_ethanol_ani2x_nnpops.pdb +++ /dev/null @@ -1,21 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.1.1, 2024-04-04 -HETATM 1 C1 UNL A 1 -0.891 0.159 0.016 1.00 0.00 C -HETATM 2 C2 UNL A 1 0.484 -0.446 -0.223 1.00 0.00 C -HETATM 3 O1 UNL A 1 1.402 0.601 0.004 1.00 0.00 O -HETATM 4 H1 UNL A 1 -0.925 0.795 0.909 1.00 0.00 H -HETATM 5 H2 UNL A 1 -1.644 -0.642 -0.011 1.00 0.00 H -HETATM 6 H3 UNL A 1 -1.094 0.800 -0.883 1.00 0.00 H -HETATM 7 H4 UNL A 1 0.709 -1.272 0.464 1.00 0.00 H -HETATM 8 H5 UNL A 1 0.591 -0.746 -1.271 1.00 0.00 H -HETATM 9 H6 UNL A 1 1.368 0.752 0.995 1.00 0.00 H -TER 10 UNL A 1 -CONECT 1 2 4 5 6 -CONECT 2 1 3 7 8 -CONECT 3 2 9 -CONECT 4 1 -CONECT 5 1 -CONECT 6 1 -CONECT 7 2 -CONECT 8 2 -CONECT 9 3 -END diff --git a/test_stability_protocol/vacuum_ethanol_ani2x_torchani.csv b/test_stability_protocol/vacuum_ethanol_ani2x_torchani.csv deleted file mode 100644 index 3a64c50..0000000 --- a/test_stability_protocol/vacuum_ethanol_ani2x_torchani.csv +++ /dev/null @@ -1,51 +0,0 @@ -bond distance [A],potential energy [kJ/mol] -0.0,-405308.8461226833 -0.20408163265306123,-404549.2627221904 -0.40816326530612246,-404580.9229262979 -0.6122448979591837,-405743.41416063113 -0.8163265306122449,-406675.88774148986 -1.0204081632653061,-406896.5660958171 -1.2244897959183674,-406887.3856947073 -1.4285714285714286,-406807.53414930176 -1.6326530612244898,-406710.9643903323 -1.836734693877551,-406609.9463861441 -2.0408163265306123,-406506.564639164 -2.2448979591836737,-406406.82678822137 -2.4489795918367347,-406324.529107 -2.6530612244897958,-406273.35153696325 -2.857142857142857,-406243.69247396465 -3.0612244897959187,-406214.2159588529 -3.2653061224489797,-406186.57196474884 -3.4693877551020407,-406163.256460381 -3.673469387755102,-406147.0727647135 -3.8775510204081636,-406151.99334183073 -4.081632653061225,-406191.7207071632 -4.285714285714286,-406275.57180595776 -4.4897959183673475,-406391.92108425405 -4.6938775510204085,-406470.5114315043 -4.8979591836734695,-406489.87805654027 -5.1020408163265305,-406492.3776637072 -5.3061224489795915,-406492.3776637072 -5.510204081632653,-406492.3776637072 -5.714285714285714,-406492.3776637072 -5.918367346938775,-406492.3776637072 -6.122448979591837,-406492.3776637072 -6.326530612244898,-406492.3776637072 -6.530612244897959,-406492.3776637072 -6.73469387755102,-406492.3776637072 -6.938775510204081,-406492.3776637072 -7.142857142857143,-406492.3776637072 -7.346938775510204,-406492.3776637072 -7.551020408163265,-406492.3776637072 -7.755102040816327,-406492.3776637072 -7.959183673469388,-406492.3776637072 -8.16326530612245,-406492.3776637072 -8.36734693877551,-406492.3776637072 -8.571428571428571,-406492.3776637072 -8.775510204081632,-406492.3776637072 -8.979591836734695,-406492.3776637072 -9.183673469387756,-406492.3776637072 -9.387755102040817,-406492.3776637072 -9.591836734693878,-406492.3776637072 -9.795918367346939,-406492.3776637072 -10.0,-406492.3776637072 diff --git a/test_stability_protocol/vacuum_ethanol_ani2x_torchani.dcd b/test_stability_protocol/vacuum_ethanol_ani2x_torchani.dcd deleted file mode 100644 index ee13471..0000000 Binary files a/test_stability_protocol/vacuum_ethanol_ani2x_torchani.dcd and /dev/null differ diff --git a/test_stability_protocol/vacuum_ethanol_ani2x_torchani.pdb b/test_stability_protocol/vacuum_ethanol_ani2x_torchani.pdb deleted file mode 100644 index 6baa88c..0000000 --- a/test_stability_protocol/vacuum_ethanol_ani2x_torchani.pdb +++ /dev/null @@ -1,21 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.1.1, 2024-04-04 -HETATM 1 C1 UNL A 1 -0.816 -0.277 -0.080 1.00 0.00 C -HETATM 2 C2 UNL A 1 0.425 0.516 0.165 1.00 0.00 C -HETATM 3 O1 UNL A 1 1.582 -0.218 0.188 1.00 0.00 O -HETATM 4 H1 UNL A 1 -1.687 0.363 0.227 1.00 0.00 H -HETATM 5 H2 UNL A 1 -0.868 -1.225 0.492 1.00 0.00 H -HETATM 6 H3 UNL A 1 -0.992 -0.499 -1.165 1.00 0.00 H -HETATM 7 H4 UNL A 1 0.323 1.014 1.159 1.00 0.00 H -HETATM 8 H5 UNL A 1 0.448 1.334 -0.596 1.00 0.00 H -HETATM 9 H6 UNL A 1 1.585 -1.008 -0.389 1.00 0.00 H -TER 10 UNL A 1 -CONECT 1 2 4 5 6 -CONECT 2 1 3 7 8 -CONECT 3 2 9 -CONECT 4 1 -CONECT 5 1 -CONECT 6 1 -CONECT 7 2 -CONECT 8 2 -CONECT 9 3 -END diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.csv b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.csv deleted file mode 100644 index dcfc7bf..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.csv +++ /dev/null @@ -1,21 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -10,0.010000000000000002,-6418818.920345332,-6418813.850277106,4.234646150208173,0.9572847779134269,0 -20,0.02000000000000001,-6418815.624311389,-6418808.464713736,5.979872714123565,0.9572847779134269,0.473 -30,0.03000000000000002,-6418812.924198882,-6418801.500192245,9.541612376682947,0.9572847779134269,0.493 -40,0.04000000000000003,-6418809.29827986,-6418794.164713642,12.639928120296485,0.9572847779134269,0.514 -50,0.05000000000000004,-6418806.852936285,-6418787.3669157885,16.2752053851393,0.9572847779134269,0.524 -60,0.060000000000000046,-6418803.535619434,-6418780.483699313,19.253532786223495,0.9572847779134269,0.528 -70,0.07000000000000005,-6418797.176098622,-6418773.359935766,19.89184718638674,0.9572847779134269,0.54 -80,0.08000000000000006,-6418794.666906321,-6418764.9045575,24.858248502524816,0.9572847779134269,0.532 -90,0.09000000000000007,-6418795.611804857,-6418757.839224785,31.54859139776505,0.9572847779134269,0.534 -100,0.10000000000000007,-6418790.3480408415,-6418753.820958416,30.508321014622023,0.9572847779134269,0.527 -110,0.11000000000000008,-6418785.156889102,-6418746.254108693,32.492562621180575,0.9572847779134269,0.53 -120,0.12000000000000009,-6418781.918444207,-6418738.442813914,36.31191973808309,0.9572847779134269,0.529 -130,0.1300000000000001,-6418779.17795677,-6418733.847583354,37.861046983902845,0.9572847779134269,0.519 -140,0.1400000000000001,-6418776.341383262,-6418727.537942982,40.76183817107864,0.9572847779134269,0.515 -150,0.1500000000000001,-6418772.0337852035,-6418723.835388124,40.25649115330845,0.9572847779134269,0.516 -160,0.16000000000000011,-6418774.19932113,-6418716.324321061,48.33862886405609,0.9572847779134269,0.514 -170,0.17000000000000012,-6418771.586844128,-6418714.422391369,47.745162208076025,0.9572847779134269,0.512 -180,0.18000000000000013,-6418761.1569670895,-6418703.901823067,47.82090979106705,0.9572847779134269,0.511 -190,0.19000000000000014,-6418756.106658126,-6418699.665268402,47.14124211140189,0.9572847779134269,0.51 -200,0.20000000000000015,-6418765.180375724,-6418696.905125052,57.02517492734947,0.9572847779134269,0.509 diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.dcd b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.dcd deleted file mode 100644 index 12c18a1..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.pdb b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.pdb deleted file mode 100644 index 66c78e1..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVE.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -13.898 7.198 5.082 1.00 0.00 O -HETATM 2 H1 HOH A 1 -14.327 7.367 4.243 1.00 0.00 H -HETATM 3 H2 HOH A 1 -13.159 6.630 4.864 1.00 0.00 H -HETATM 4 O HOH A 2 -11.687 18.777 22.719 1.00 0.00 O -HETATM 5 H1 HOH A 2 -12.369 19.327 22.335 1.00 0.00 H -HETATM 6 H2 HOH A 2 -11.648 19.047 23.637 1.00 0.00 H -HETATM 7 O HOH A 3 13.064 7.040 16.214 1.00 0.00 O -HETATM 8 H1 HOH A 3 13.243 7.292 15.308 1.00 0.00 H -HETATM 9 H2 HOH A 3 12.779 7.850 16.637 1.00 0.00 H -HETATM 10 O HOH A 4 -1.044 9.026 5.619 1.00 0.00 O -HETATM 11 H1 HOH A 4 -1.468 9.393 6.395 1.00 0.00 H -HETATM 12 H2 HOH A 4 -0.735 8.164 5.899 1.00 0.00 H -HETATM 13 O HOH A 5 -9.759 16.593 4.491 1.00 0.00 O -HETATM 14 H1 HOH A 5 -10.329 15.832 4.600 1.00 0.00 H -HETATM 15 H2 HOH A 5 -10.198 17.129 3.830 1.00 0.00 H -HETATM 16 O HOH A 6 -15.910 7.994 3.063 1.00 0.00 O -HETATM 17 H1 HOH A 6 -16.276 8.550 3.751 1.00 0.00 H -HETATM 18 H2 HOH A 6 -16.124 8.448 2.248 1.00 0.00 H -HETATM 19 O HOH A 7 3.062 10.003 11.590 1.00 0.00 O -HETATM 20 H1 HOH A 7 2.234 10.086 12.063 1.00 0.00 H -HETATM 21 H2 HOH A 7 2.953 10.554 10.815 1.00 0.00 H -HETATM 22 O HOH A 8 2.074 11.216 8.968 1.00 0.00 O -HETATM 23 H1 HOH A 8 1.586 11.232 8.145 1.00 0.00 H -HETATM 24 H2 HOH A 8 2.949 11.525 8.734 1.00 0.00 H -HETATM 25 O HOH A 9 -15.768 4.861 7.428 1.00 0.00 O -HETATM 26 H1 HOH A 9 -16.207 5.619 7.044 1.00 0.00 H -HETATM 27 H2 HOH A 9 -15.201 5.230 8.106 1.00 0.00 H -HETATM 28 O HOH A 10 4.739 -7.861 8.631 1.00 0.00 O -HETATM 29 H1 HOH A 10 5.268 -8.623 8.398 1.00 0.00 H -HETATM 30 H2 HOH A 10 5.259 -7.110 8.343 1.00 0.00 H -HETATM 31 O HOH A 11 -4.073 0.129 1.973 1.00 0.00 O -HETATM 32 H1 HOH A 11 -4.418 -0.684 1.604 1.00 0.00 H -HETATM 33 H2 HOH A 11 -4.795 0.753 1.896 1.00 0.00 H -HETATM 34 O HOH A 12 6.410 15.141 9.337 1.00 0.00 O -HETATM 35 H1 HOH A 12 5.678 15.535 9.812 1.00 0.00 H -HETATM 36 H2 HOH A 12 7.188 15.421 9.819 1.00 0.00 H -HETATM 37 O HOH A 13 -7.796 18.541 8.441 1.00 0.00 O -HETATM 38 H1 HOH A 13 -8.059 19.425 8.695 1.00 0.00 H -HETATM 39 H2 HOH A 13 -6.894 18.637 8.135 1.00 0.00 H -HETATM 40 O HOH A 14 -4.236 13.722 5.602 1.00 0.00 O -HETATM 41 H1 HOH A 14 -4.655 13.306 4.848 1.00 0.00 H -HETATM 42 H2 HOH A 14 -4.958 14.114 6.092 1.00 0.00 H -HETATM 43 O HOH A 15 3.782 12.668 3.859 1.00 0.00 O -HETATM 44 H1 HOH A 15 4.060 12.884 2.969 1.00 0.00 H -HETATM 45 H2 HOH A 15 3.154 13.353 4.088 1.00 0.00 H -HETATM 46 O HOH A 16 8.816 16.607 10.866 1.00 0.00 O -HETATM 47 H1 HOH A 16 8.477 17.365 11.342 1.00 0.00 H -HETATM 48 H2 HOH A 16 9.531 16.958 10.335 1.00 0.00 H -HETATM 49 O HOH A 17 -9.047 11.227 6.290 1.00 0.00 O -HETATM 50 H1 HOH A 17 -9.399 10.359 6.093 1.00 0.00 H -HETATM 51 H2 HOH A 17 -9.027 11.675 5.444 1.00 0.00 H -HETATM 52 O HOH A 18 4.054 5.873 10.681 1.00 0.00 O -HETATM 53 H1 HOH A 18 3.173 5.687 10.357 1.00 0.00 H -HETATM 54 H2 HOH A 18 3.918 6.209 11.567 1.00 0.00 H -HETATM 55 O HOH A 19 7.481 11.914 0.129 1.00 0.00 O -HETATM 56 H1 HOH A 19 8.169 12.560 0.290 1.00 0.00 H -HETATM 57 H2 HOH A 19 7.271 11.566 0.995 1.00 0.00 H -HETATM 58 O HOH A 20 -9.403 3.868 7.016 1.00 0.00 O -HETATM 59 H1 HOH A 20 -10.322 3.792 6.762 1.00 0.00 H -HETATM 60 H2 HOH A 20 -9.042 2.993 6.874 1.00 0.00 H -HETATM 61 O HOH A 21 21.649 6.038 9.111 1.00 0.00 O -HETATM 62 H1 HOH A 21 21.871 6.936 8.865 1.00 0.00 H -HETATM 63 H2 HOH A 21 21.407 5.616 8.287 1.00 0.00 H -HETATM 64 O HOH A 22 2.365 4.877 4.508 1.00 0.00 O -HETATM 65 H1 HOH A 22 1.663 5.527 4.485 1.00 0.00 H -HETATM 66 H2 HOH A 22 2.982 5.213 5.158 1.00 0.00 H -HETATM 67 O HOH A 23 -6.603 19.570 15.264 1.00 0.00 O -HETATM 68 H1 HOH A 23 -5.889 19.712 15.886 1.00 0.00 H -HETATM 69 H2 HOH A 23 -6.662 20.390 14.774 1.00 0.00 H -HETATM 70 O HOH A 24 -9.763 13.284 -0.061 1.00 0.00 O -HETATM 71 H1 HOH A 24 -9.126 12.583 -0.194 1.00 0.00 H -HETATM 72 H2 HOH A 24 -9.485 13.978 -0.659 1.00 0.00 H -HETATM 73 O HOH A 25 7.902 10.434 7.849 1.00 0.00 O -HETATM 74 H1 HOH A 25 8.042 11.287 7.439 1.00 0.00 H -HETATM 75 H2 HOH A 25 7.828 10.627 8.784 1.00 0.00 H -HETATM 76 O HOH A 26 4.468 2.815 11.293 1.00 0.00 O -HETATM 77 H1 HOH A 26 4.731 2.481 10.435 1.00 0.00 H -HETATM 78 H2 HOH A 26 4.374 3.758 11.164 1.00 0.00 H -HETATM 79 O HOH A 27 -14.508 8.854 7.188 1.00 0.00 O -HETATM 80 H1 HOH A 27 -13.635 9.180 7.408 1.00 0.00 H -HETATM 81 H2 HOH A 27 -14.402 8.445 6.329 1.00 0.00 H -HETATM 82 O HOH A 28 7.910 5.090 -5.237 1.00 0.00 O -HETATM 83 H1 HOH A 28 7.985 4.486 -5.976 1.00 0.00 H -HETATM 84 H2 HOH A 28 7.472 4.581 -4.555 1.00 0.00 H -HETATM 85 O HOH A 29 -9.350 10.583 2.679 1.00 0.00 O -HETATM 86 H1 HOH A 29 -10.122 10.027 2.784 1.00 0.00 H -HETATM 87 H2 HOH A 29 -9.364 11.160 3.442 1.00 0.00 H -HETATM 88 O HOH A 30 0.711 -7.291 14.202 1.00 0.00 O -HETATM 89 H1 HOH A 30 1.401 -6.671 14.438 1.00 0.00 H -HETATM 90 H2 HOH A 30 0.110 -6.784 13.656 1.00 0.00 H -HETATM 91 O HOH A 31 -1.048 3.750 -7.578 1.00 0.00 O -HETATM 92 H1 HOH A 31 -0.406 3.170 -7.987 1.00 0.00 H -HETATM 93 H2 HOH A 31 -1.144 4.475 -8.195 1.00 0.00 H -HETATM 94 O HOH A 32 -2.166 13.193 7.054 1.00 0.00 O -HETATM 95 H1 HOH A 32 -2.359 13.774 7.790 1.00 0.00 H -HETATM 96 H2 HOH A 32 -2.969 13.189 6.534 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.csv b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.csv deleted file mode 100644 index 7f236a8..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.csv +++ /dev/null @@ -1,21 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -10,0.010000000000000002,-6418847.553994675,-6418842.906031919,3.882093241999139,0.9572847779134269,0 -20,0.02000000000000001,-6418845.648861392,-6418837.208149536,7.049890925238162,0.9572847779134269,0.538 -30,0.03000000000000002,-6418841.134067962,-6418830.110641991,9.207037515203712,0.9572847779134269,0.579 -40,0.04000000000000003,-6418839.110626746,-6418822.928367968,13.515822035816566,0.9572847779134269,0.586 -50,0.05000000000000004,-6418834.80553256,-6418816.210798687,15.530780793350882,0.9572847779134269,0.591 -60,0.060000000000000046,-6418830.694175437,-6418807.6938594,19.2104317809015,0.9572847779134269,0.597 -70,0.07000000000000005,-6418828.081072466,-6418800.748684618,22.828685107639345,0.9572847779134269,0.604 -80,0.08000000000000006,-6418825.605682433,-6418793.783640357,26.57855515769268,0.9572847779134269,0.601 -90,0.09000000000000007,-6418819.694667616,-6418785.953305745,28.18161843491523,0.9572847779134269,0.606 -100,0.10000000000000007,-6418813.089141422,-6418778.096421428,29.226783632206622,0.9572847779134269,0.609 -110,0.11000000000000008,-6418811.056936656,-6418772.932485467,31.84248284162501,0.9572847779134269,0.619 -120,0.12000000000000009,-6418809.946156629,-6418767.303392135,35.61628966215389,0.9572847779134269,0.622 -130,0.1300000000000001,-6418806.816004179,-6418761.582755452,37.77992604673129,0.9572847779134269,0.622 -140,0.1400000000000001,-6418807.7815596545,-6418755.605945438,43.578361094757504,0.9572847779134269,0.625 -150,0.1500000000000001,-6418799.133500225,-6418749.931281988,41.094907366204126,0.9572847779134269,0.629 -160,0.16000000000000011,-6418796.219619681,-6418741.412039653,45.776643917173075,0.9572847779134269,0.628 -170,0.17000000000000012,-6418790.845059349,-6418735.801130555,45.974048242425766,0.9572847779134269,0.607 -180,0.18000000000000013,-6418785.399451662,-6418726.276790252,49.38070641747384,0.9572847779134269,0.588 -190,0.19000000000000014,-6418783.559106055,-6418722.236852578,51.21786001522167,0.9572847779134269,0.582 -200,0.20000000000000015,-6418780.2226971835,-6418713.556874986,55.68094053201102,0.9572847779134269,0.578 diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.dcd b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.dcd deleted file mode 100644 index b5c1588..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.pdb b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.pdb deleted file mode 100644 index e279a39..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NVT.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -1.954 3.440 -5.037 1.00 0.00 O -HETATM 2 H1 HOH A 1 -1.651 4.343 -5.132 1.00 0.00 H -HETATM 3 H2 HOH A 1 -2.867 3.521 -4.762 1.00 0.00 H -HETATM 4 O HOH A 2 -5.919 2.864 10.079 1.00 0.00 O -HETATM 5 H1 HOH A 2 -5.890 3.820 10.107 1.00 0.00 H -HETATM 6 H2 HOH A 2 -6.331 2.661 9.239 1.00 0.00 H -HETATM 7 O HOH A 3 13.075 10.851 5.328 1.00 0.00 O -HETATM 8 H1 HOH A 3 13.032 11.484 6.044 1.00 0.00 H -HETATM 9 H2 HOH A 3 13.847 10.320 5.521 1.00 0.00 H -HETATM 10 O HOH A 4 -4.913 -4.307 -0.393 1.00 0.00 O -HETATM 11 H1 HOH A 4 -4.156 -4.328 0.193 1.00 0.00 H -HETATM 12 H2 HOH A 4 -4.947 -3.404 -0.708 1.00 0.00 H -HETATM 13 O HOH A 5 9.560 0.219 -2.575 1.00 0.00 O -HETATM 14 H1 HOH A 5 9.547 0.457 -3.502 1.00 0.00 H -HETATM 15 H2 HOH A 5 8.745 -0.265 -2.441 1.00 0.00 H -HETATM 16 O HOH A 6 -3.070 -14.166 7.079 1.00 0.00 O -HETATM 17 H1 HOH A 6 -3.617 -13.610 6.525 1.00 0.00 H -HETATM 18 H2 HOH A 6 -3.444 -15.042 6.984 1.00 0.00 H -HETATM 19 O HOH A 7 -2.522 -0.298 12.798 1.00 0.00 O -HETATM 20 H1 HOH A 7 -3.371 -0.627 12.504 1.00 0.00 H -HETATM 21 H2 HOH A 7 -2.451 0.571 12.403 1.00 0.00 H -HETATM 22 O HOH A 8 -8.309 6.674 0.247 1.00 0.00 O -HETATM 23 H1 HOH A 8 -8.047 7.533 0.580 1.00 0.00 H -HETATM 24 H2 HOH A 8 -8.267 6.763 -0.705 1.00 0.00 H -HETATM 25 O HOH A 9 -5.107 -8.823 2.185 1.00 0.00 O -HETATM 26 H1 HOH A 9 -5.278 -8.124 1.555 1.00 0.00 H -HETATM 27 H2 HOH A 9 -5.059 -8.378 3.031 1.00 0.00 H -HETATM 28 O HOH A 10 -1.179 -3.633 4.368 1.00 0.00 O -HETATM 29 H1 HOH A 10 -0.812 -2.849 3.959 1.00 0.00 H -HETATM 30 H2 HOH A 10 -0.766 -3.669 5.231 1.00 0.00 H -HETATM 31 O HOH A 11 4.241 -11.509 8.623 1.00 0.00 O -HETATM 32 H1 HOH A 11 3.917 -11.040 9.393 1.00 0.00 H -HETATM 33 H2 HOH A 11 3.500 -12.045 8.340 1.00 0.00 H -HETATM 34 O HOH A 12 15.456 3.621 16.964 1.00 0.00 O -HETATM 35 H1 HOH A 12 15.925 3.112 17.625 1.00 0.00 H -HETATM 36 H2 HOH A 12 14.531 3.500 17.179 1.00 0.00 H -HETATM 37 O HOH A 13 8.681 7.570 -0.443 1.00 0.00 O -HETATM 38 H1 HOH A 13 9.438 6.991 -0.527 1.00 0.00 H -HETATM 39 H2 HOH A 13 8.109 7.128 0.184 1.00 0.00 H -HETATM 40 O HOH A 14 -5.822 -3.054 -3.975 1.00 0.00 O -HETATM 41 H1 HOH A 14 -6.481 -3.702 -3.728 1.00 0.00 H -HETATM 42 H2 HOH A 14 -6.318 -2.245 -4.105 1.00 0.00 H -HETATM 43 O HOH A 15 0.476 2.231 0.535 1.00 0.00 O -HETATM 44 H1 HOH A 15 0.825 1.664 1.223 1.00 0.00 H -HETATM 45 H2 HOH A 15 -0.473 2.194 0.651 1.00 0.00 H -HETATM 46 O HOH A 16 -3.078 9.016 7.697 1.00 0.00 O -HETATM 47 H1 HOH A 16 -3.892 8.844 8.171 1.00 0.00 H -HETATM 48 H2 HOH A 16 -2.510 8.280 7.922 1.00 0.00 H -HETATM 49 O HOH A 17 -10.366 5.607 -2.670 1.00 0.00 O -HETATM 50 H1 HOH A 17 -10.090 4.705 -2.507 1.00 0.00 H -HETATM 51 H2 HOH A 17 -11.321 5.581 -2.605 1.00 0.00 H -HETATM 52 O HOH A 18 -3.082 6.608 1.462 1.00 0.00 O -HETATM 53 H1 HOH A 18 -2.374 6.320 2.039 1.00 0.00 H -HETATM 54 H2 HOH A 18 -3.619 7.182 2.009 1.00 0.00 H -HETATM 55 O HOH A 19 9.332 5.334 -18.149 1.00 0.00 O -HETATM 56 H1 HOH A 19 10.072 5.875 -18.423 1.00 0.00 H -HETATM 57 H2 HOH A 19 9.303 5.429 -17.197 1.00 0.00 H -HETATM 58 O HOH A 20 -17.736 -5.793 12.304 1.00 0.00 O -HETATM 59 H1 HOH A 20 -18.096 -6.567 11.872 1.00 0.00 H -HETATM 60 H2 HOH A 20 -17.574 -5.174 11.591 1.00 0.00 H -HETATM 61 O HOH A 21 5.034 -1.585 2.666 1.00 0.00 O -HETATM 62 H1 HOH A 21 4.742 -0.700 2.446 1.00 0.00 H -HETATM 63 H2 HOH A 21 4.346 -2.156 2.325 1.00 0.00 H -HETATM 64 O HOH A 22 -9.299 -1.492 4.260 1.00 0.00 O -HETATM 65 H1 HOH A 22 -8.829 -0.845 4.787 1.00 0.00 H -HETATM 66 H2 HOH A 22 -8.787 -1.563 3.455 1.00 0.00 H -HETATM 67 O HOH A 23 -0.775 -9.163 4.873 1.00 0.00 O -HETATM 68 H1 HOH A 23 -1.242 -8.330 4.944 1.00 0.00 H -HETATM 69 H2 HOH A 23 -1.341 -9.710 4.328 1.00 0.00 H -HETATM 70 O HOH A 24 -1.986 2.110 1.470 1.00 0.00 O -HETATM 71 H1 HOH A 24 -1.846 3.053 1.559 1.00 0.00 H -HETATM 72 H2 HOH A 24 -2.899 2.028 1.193 1.00 0.00 H -HETATM 73 O HOH A 25 2.668 -0.662 -8.860 1.00 0.00 O -HETATM 74 H1 HOH A 25 3.092 0.088 -8.444 1.00 0.00 H -HETATM 75 H2 HOH A 25 1.731 -0.500 -8.750 1.00 0.00 H -HETATM 76 O HOH A 26 1.944 -15.247 5.305 1.00 0.00 O -HETATM 77 H1 HOH A 26 2.035 -15.230 4.352 1.00 0.00 H -HETATM 78 H2 HOH A 26 1.034 -15.502 5.455 1.00 0.00 H -HETATM 79 O HOH A 27 -7.282 3.032 7.228 1.00 0.00 O -HETATM 80 H1 HOH A 27 -7.321 3.654 6.502 1.00 0.00 H -HETATM 81 H2 HOH A 27 -8.191 2.935 7.510 1.00 0.00 H -HETATM 82 O HOH A 28 5.842 20.063 -4.579 1.00 0.00 O -HETATM 83 H1 HOH A 28 5.849 19.302 -5.160 1.00 0.00 H -HETATM 84 H2 HOH A 28 6.368 19.796 -3.826 1.00 0.00 H -HETATM 85 O HOH A 29 -8.570 1.110 3.042 1.00 0.00 O -HETATM 86 H1 HOH A 29 -9.404 0.840 3.428 1.00 0.00 H -HETATM 87 H2 HOH A 29 -7.991 1.242 3.792 1.00 0.00 H -HETATM 88 O HOH A 30 -19.868 -7.194 -2.050 1.00 0.00 O -HETATM 89 H1 HOH A 30 -20.247 -8.060 -2.201 1.00 0.00 H -HETATM 90 H2 HOH A 30 -19.604 -7.204 -1.131 1.00 0.00 H -HETATM 91 O HOH A 31 -18.510 -2.238 -2.261 1.00 0.00 O -HETATM 92 H1 HOH A 31 -19.180 -2.859 -2.549 1.00 0.00 H -HETATM 93 H2 HOH A 31 -18.924 -1.380 -2.353 1.00 0.00 H -HETATM 94 O HOH A 32 -10.108 -0.524 1.083 1.00 0.00 O -HETATM 95 H1 HOH A 32 -10.523 -1.031 0.385 1.00 0.00 H -HETATM 96 H2 HOH A 32 -10.833 -0.248 1.643 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.csv b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.csv deleted file mode 100644 index d4c33b2..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.csv +++ /dev/null @@ -1,21 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -10,0.010000000000000002,-6418817.658394059,-6418812.860492285,4.007326011390198,0.9572847779134269,0 -20,0.02000000000000001,-6418814.854370881,-6418806.55636682,6.930697850932685,0.9572847779134269,0.944 -30,0.03000000000000002,-6418812.0556684295,-6418797.8882446475,11.832982105233206,0.9591038217307927,0.869 -40,0.04000000000000003,-6418807.152461922,-6418790.031476956,14.299869322747783,0.9591038217307927,0.884 -50,0.05000000000000004,-6418802.390724157,-6418785.337122319,14.243589270819507,0.9563957067189977,0.853 -60,0.060000000000000046,-6418801.232996538,-6418779.405386188,18.23095904001301,0.9563957067189977,0.865 -70,0.07000000000000005,-6418799.264953482,-6418771.062845419,23.555096901759775,0.9563957067189977,0.876 -80,0.08000000000000006,-6418791.99026761,-6418765.985386251,21.719918915154082,0.9526008279569849,0.861 -90,0.09000000000000007,-6418788.527100241,-6418760.287392286,23.58650126006814,0.9526008279569849,0.87 -100,0.10000000000000007,-6418781.998881081,-6418749.102926019,27.475513796800087,0.9443933221838144,0.855 -110,0.11000000000000008,-6418783.222648312,-6418744.636426579,32.228165000326136,0.9443933221838144,0.854 -120,0.12000000000000009,-6418778.29690696,-6418737.659611243,33.941272628748614,0.9443933221838144,0.859 -130,0.1300000000000001,-6418778.1519953925,-6418731.654239138,38.836073951202145,0.9532981373012805,0.841 -140,0.1400000000000001,-6418774.589925096,-6418727.561832058,39.279024325636826,0.9532981373012805,0.843 -150,0.1500000000000001,-6418771.759298283,-6418718.272850357,44.67320177007398,0.9532981373012805,0.842 -160,0.16000000000000011,-6418763.031114962,-6418708.843930281,45.25847440816013,0.9532981373012805,0.846 -170,0.17000000000000012,-6418756.551721298,-6418700.402457482,46.897251340598494,0.9532981373012805,0.847 -180,0.18000000000000013,-6418758.994873987,-6418695.082808922,53.380934590076414,0.9529363864008477,0.836 -190,0.19000000000000014,-6418756.812123942,-6418689.962862198,55.83415376933536,0.9529363864008477,0.836 -200,0.20000000000000015,-6418754.799011197,-6418684.431561916,58.77263085646924,0.9589116061400611,0.834 diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.dcd b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.dcd deleted file mode 100644 index 094ee63..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.pdb b/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.pdb deleted file mode 100644 index 1926069..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_nnpops_NpT.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 9.259 -4.174 -9.837 1.00 0.00 O -HETATM 2 H1 HOH A 1 8.487 -4.421 -9.327 1.00 0.00 H -HETATM 3 H2 HOH A 1 9.995 -4.552 -9.355 1.00 0.00 H -HETATM 4 O HOH A 2 -0.789 7.776 -5.970 1.00 0.00 O -HETATM 5 H1 HOH A 2 -0.946 7.190 -5.230 1.00 0.00 H -HETATM 6 H2 HOH A 2 -0.029 8.296 -5.706 1.00 0.00 H -HETATM 7 O HOH A 3 0.703 -4.038 -2.268 1.00 0.00 O -HETATM 8 H1 HOH A 3 0.251 -4.241 -1.450 1.00 0.00 H -HETATM 9 H2 HOH A 3 1.583 -3.775 -1.997 1.00 0.00 H -HETATM 10 O HOH A 4 -19.844 -10.080 -0.870 1.00 0.00 O -HETATM 11 H1 HOH A 4 -19.372 -10.752 -1.362 1.00 0.00 H -HETATM 12 H2 HOH A 4 -19.459 -10.110 0.006 1.00 0.00 H -HETATM 13 O HOH A 5 -17.030 1.819 -12.168 1.00 0.00 O -HETATM 14 H1 HOH A 5 -17.539 2.301 -12.820 1.00 0.00 H -HETATM 15 H2 HOH A 5 -16.143 1.792 -12.528 1.00 0.00 H -HETATM 16 O HOH A 6 14.366 -1.382 9.319 1.00 0.00 O -HETATM 17 H1 HOH A 6 15.172 -1.691 9.733 1.00 0.00 H -HETATM 18 H2 HOH A 6 14.221 -0.514 9.694 1.00 0.00 H -HETATM 19 O HOH A 7 -3.022 -12.259 7.482 1.00 0.00 O -HETATM 20 H1 HOH A 7 -3.198 -11.318 7.461 1.00 0.00 H -HETATM 21 H2 HOH A 7 -3.037 -12.485 8.412 1.00 0.00 H -HETATM 22 O HOH A 8 -11.892 -6.770 3.363 1.00 0.00 O -HETATM 23 H1 HOH A 8 -11.135 -7.094 2.876 1.00 0.00 H -HETATM 24 H2 HOH A 8 -11.939 -5.840 3.143 1.00 0.00 H -HETATM 25 O HOH A 9 6.263 -5.149 17.298 1.00 0.00 O -HETATM 26 H1 HOH A 9 5.773 -5.303 16.490 1.00 0.00 H -HETATM 27 H2 HOH A 9 7.177 -5.295 17.056 1.00 0.00 H -HETATM 28 O HOH A 10 2.302 -14.669 4.223 1.00 0.00 O -HETATM 29 H1 HOH A 10 2.734 -14.211 4.943 1.00 0.00 H -HETATM 30 H2 HOH A 10 3.005 -15.151 3.788 1.00 0.00 H -HETATM 31 O HOH A 11 -11.976 -9.277 7.738 1.00 0.00 O -HETATM 32 H1 HOH A 11 -11.285 -9.908 7.936 1.00 0.00 H -HETATM 33 H2 HOH A 11 -11.547 -8.613 7.198 1.00 0.00 H -HETATM 34 O HOH A 12 20.245 1.693 2.222 1.00 0.00 O -HETATM 35 H1 HOH A 12 20.512 2.610 2.155 1.00 0.00 H -HETATM 36 H2 HOH A 12 21.064 1.200 2.168 1.00 0.00 H -HETATM 37 O HOH A 13 -8.317 -6.525 -3.641 1.00 0.00 O -HETATM 38 H1 HOH A 13 -7.987 -6.312 -4.514 1.00 0.00 H -HETATM 39 H2 HOH A 13 -8.745 -5.722 -3.344 1.00 0.00 H -HETATM 40 O HOH A 14 0.851 -15.448 1.927 1.00 0.00 O -HETATM 41 H1 HOH A 14 1.625 -15.798 1.487 1.00 0.00 H -HETATM 42 H2 HOH A 14 1.201 -14.897 2.627 1.00 0.00 H -HETATM 43 O HOH A 15 7.323 -8.106 0.474 1.00 0.00 O -HETATM 44 H1 HOH A 15 7.819 -8.423 1.229 1.00 0.00 H -HETATM 45 H2 HOH A 15 7.888 -8.290 -0.277 1.00 0.00 H -HETATM 46 O HOH A 16 -4.648 -8.935 6.789 1.00 0.00 O -HETATM 47 H1 HOH A 16 -3.760 -9.020 7.137 1.00 0.00 H -HETATM 48 H2 HOH A 16 -4.533 -8.509 5.939 1.00 0.00 H -HETATM 49 O HOH A 17 -12.098 -0.168 2.482 1.00 0.00 O -HETATM 50 H1 HOH A 17 -11.839 -1.028 2.813 1.00 0.00 H -HETATM 51 H2 HOH A 17 -11.278 0.323 2.423 1.00 0.00 H -HETATM 52 O HOH A 18 -0.491 -8.142 5.615 1.00 0.00 O -HETATM 53 H1 HOH A 18 -0.980 -7.684 4.930 1.00 0.00 H -HETATM 54 H2 HOH A 18 0.291 -7.606 5.749 1.00 0.00 H -HETATM 55 O HOH A 19 -16.318 -4.073 -11.050 1.00 0.00 O -HETATM 56 H1 HOH A 19 -15.634 -4.543 -10.573 1.00 0.00 H -HETATM 57 H2 HOH A 19 -16.041 -3.157 -11.027 1.00 0.00 H -HETATM 58 O HOH A 20 -5.172 -9.327 11.260 1.00 0.00 O -HETATM 59 H1 HOH A 20 -4.579 -8.756 10.771 1.00 0.00 H -HETATM 60 H2 HOH A 20 -5.105 -9.024 12.166 1.00 0.00 H -HETATM 61 O HOH A 21 -3.023 -1.746 -19.794 1.00 0.00 O -HETATM 62 H1 HOH A 21 -2.215 -2.248 -19.690 1.00 0.00 H -HETATM 63 H2 HOH A 21 -2.976 -1.072 -19.116 1.00 0.00 H -HETATM 64 O HOH A 22 -11.445 -3.878 -3.850 1.00 0.00 O -HETATM 65 H1 HOH A 22 -10.738 -3.909 -3.207 1.00 0.00 H -HETATM 66 H2 HOH A 22 -12.114 -3.326 -3.445 1.00 0.00 H -HETATM 67 O HOH A 23 -4.216 -7.413 -5.370 1.00 0.00 O -HETATM 68 H1 HOH A 23 -4.824 -6.933 -5.932 1.00 0.00 H -HETATM 69 H2 HOH A 23 -3.376 -7.363 -5.826 1.00 0.00 H -HETATM 70 O HOH A 24 1.205 -0.340 4.917 1.00 0.00 O -HETATM 71 H1 HOH A 24 1.553 -0.574 5.778 1.00 0.00 H -HETATM 72 H2 HOH A 24 0.511 0.292 5.102 1.00 0.00 H -HETATM 73 O HOH A 25 7.503 -14.110 -7.347 1.00 0.00 O -HETATM 74 H1 HOH A 25 6.695 -13.650 -7.118 1.00 0.00 H -HETATM 75 H2 HOH A 25 8.203 -13.519 -7.067 1.00 0.00 H -HETATM 76 O HOH A 26 5.463 -12.486 3.457 1.00 0.00 O -HETATM 77 H1 HOH A 26 5.206 -12.652 4.364 1.00 0.00 H -HETATM 78 H2 HOH A 26 4.765 -11.933 3.108 1.00 0.00 H -HETATM 79 O HOH A 27 -5.651 -16.005 2.640 1.00 0.00 O -HETATM 80 H1 HOH A 27 -4.829 -15.777 2.206 1.00 0.00 H -HETATM 81 H2 HOH A 27 -6.157 -16.465 1.971 1.00 0.00 H -HETATM 82 O HOH A 28 -7.632 -1.133 -12.695 1.00 0.00 O -HETATM 83 H1 HOH A 28 -7.220 -1.430 -11.884 1.00 0.00 H -HETATM 84 H2 HOH A 28 -7.609 -0.177 -12.640 1.00 0.00 H -HETATM 85 O HOH A 29 -7.712 -10.319 -7.845 1.00 0.00 O -HETATM 86 H1 HOH A 29 -6.760 -10.257 -7.768 1.00 0.00 H -HETATM 87 H2 HOH A 29 -8.015 -10.471 -6.950 1.00 0.00 H -HETATM 88 O HOH A 30 -5.564 -22.696 -4.106 1.00 0.00 O -HETATM 89 H1 HOH A 30 -6.091 -22.054 -3.630 1.00 0.00 H -HETATM 90 H2 HOH A 30 -4.723 -22.702 -3.650 1.00 0.00 H -HETATM 91 O HOH A 31 -4.799 3.576 -0.502 1.00 0.00 O -HETATM 92 H1 HOH A 31 -4.247 3.808 -1.249 1.00 0.00 H -HETATM 93 H2 HOH A 31 -4.389 2.792 -0.135 1.00 0.00 H -HETATM 94 O HOH A 32 -7.201 -17.093 -9.352 1.00 0.00 O -HETATM 95 H1 HOH A 32 -6.698 -16.745 -10.089 1.00 0.00 H -HETATM 96 H2 HOH A 32 -7.483 -17.961 -9.642 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.csv b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.csv deleted file mode 100644 index a0c4246..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.csv +++ /dev/null @@ -1,21 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -10,0.010000000000000002,-6418779.0765499715,-6418773.5038828375,4.654429167547513,0.9572847779134269,0 -20,0.02000000000000001,-6418775.036240204,-6418766.400379421,7.212884126221413,0.9572847779134269,0.79 -30,0.03000000000000002,-6418774.143609988,-6418758.106133855,13.3948959961337,0.9572847779134269,0.799 -40,0.04000000000000003,-6418769.857920807,-6418751.16394265,15.613672069548564,0.9572847779134269,0.766 -50,0.05000000000000004,-6418766.0867772335,-6418745.592738088,17.11712744678872,0.9572847779134269,0.771 -60,0.060000000000000046,-6418763.408573601,-6418738.029040709,21.197612436685297,0.9572847779134269,0.785 -70,0.07000000000000005,-6418759.9673151085,-6418733.505043244,22.101942756122543,0.9572847779134269,0.799 -80,0.08000000000000006,-6418758.9119332405,-6418727.142901481,26.53427963293217,0.9572847779134269,0.797 -90,0.09000000000000007,-6418754.9073036425,-6418722.531172816,27.041343762167166,0.9572847779134269,0.792 -100,0.10000000000000007,-6418750.789373857,-6418713.582924212,31.075745288157165,0.9572847779134269,0.793 -110,0.11000000000000008,-6418744.726248843,-6418707.455514414,31.129437527057792,0.9572847779134269,0.796 -120,0.12000000000000009,-6418741.973242047,-6418703.121594679,32.44985504406161,0.9572847779134269,0.8 -130,0.1300000000000001,-6418733.671655847,-6418693.768091188,33.328442334510875,0.9572847779134269,0.795 -140,0.1400000000000001,-6418734.22156864,-6418688.823197494,37.917840366957876,0.9572847779134269,0.8 -150,0.1500000000000001,-6418737.686926898,-6418683.66200813,45.12294591109797,0.9572847779134269,0.795 -160,0.16000000000000011,-6418733.336763023,-6418676.896203838,47.140548424144825,0.9572847779134269,0.791 -170,0.17000000000000012,-6418729.026974078,-6418667.262476863,51.5872329036013,0.9572847779134269,0.79 -180,0.18000000000000013,-6418720.32351649,-6418660.805197043,49.711169778241185,0.9572847779134269,0.788 -190,0.19000000000000014,-6418723.846463793,-6418656.6269202,56.14342231161858,0.9572847779134269,0.792 -200,0.20000000000000015,-6418725.755978852,-6418650.600047222,62.77208953128589,0.9572847779134269,0.789 diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.dcd b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.dcd deleted file mode 100644 index 4652e32..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.pdb b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.pdb deleted file mode 100644 index 5f7f08e..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVE.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -3.287 -13.960 -17.512 1.00 0.00 O -HETATM 2 H1 HOH A 1 -3.654 -14.773 -17.166 1.00 0.00 H -HETATM 3 H2 HOH A 1 -3.892 -13.279 -17.219 1.00 0.00 H -HETATM 4 O HOH A 2 -9.989 -9.237 -3.648 1.00 0.00 O -HETATM 5 H1 HOH A 2 -10.540 -9.902 -4.059 1.00 0.00 H -HETATM 6 H2 HOH A 2 -10.600 -8.548 -3.386 1.00 0.00 H -HETATM 7 O HOH A 3 -0.628 5.302 -17.794 1.00 0.00 O -HETATM 8 H1 HOH A 3 -1.556 5.411 -18.004 1.00 0.00 H -HETATM 9 H2 HOH A 3 -0.612 4.622 -17.121 1.00 0.00 H -HETATM 10 O HOH A 4 4.265 -2.869 -13.613 1.00 0.00 O -HETATM 11 H1 HOH A 4 3.670 -3.543 -13.943 1.00 0.00 H -HETATM 12 H2 HOH A 4 4.416 -3.109 -12.699 1.00 0.00 H -HETATM 13 O HOH A 5 -4.647 7.080 -10.180 1.00 0.00 O -HETATM 14 H1 HOH A 5 -4.112 6.627 -9.528 1.00 0.00 H -HETATM 15 H2 HOH A 5 -5.166 7.704 -9.673 1.00 0.00 H -HETATM 16 O HOH A 6 10.655 5.413 -10.156 1.00 0.00 O -HETATM 17 H1 HOH A 6 10.548 6.133 -10.778 1.00 0.00 H -HETATM 18 H2 HOH A 6 9.930 5.519 -9.540 1.00 0.00 H -HETATM 19 O HOH A 7 -1.147 3.276 9.113 1.00 0.00 O -HETATM 20 H1 HOH A 7 -1.456 3.291 10.018 1.00 0.00 H -HETATM 21 H2 HOH A 7 -0.599 4.056 9.033 1.00 0.00 H -HETATM 22 O HOH A 8 -1.561 -1.505 2.268 1.00 0.00 O -HETATM 23 H1 HOH A 8 -0.753 -1.901 2.593 1.00 0.00 H -HETATM 24 H2 HOH A 8 -2.259 -1.979 2.720 1.00 0.00 H -HETATM 25 O HOH A 9 -0.921 0.665 0.566 1.00 0.00 O -HETATM 26 H1 HOH A 9 -1.216 0.004 1.191 1.00 0.00 H -HETATM 27 H2 HOH A 9 -1.627 1.312 0.549 1.00 0.00 H -HETATM 28 O HOH A 10 1.880 6.212 13.097 1.00 0.00 O -HETATM 29 H1 HOH A 10 1.430 6.977 13.453 1.00 0.00 H -HETATM 30 H2 HOH A 10 1.199 5.727 12.631 1.00 0.00 H -HETATM 31 O HOH A 11 1.570 1.261 -8.325 1.00 0.00 O -HETATM 32 H1 HOH A 11 0.749 0.936 -8.694 1.00 0.00 H -HETATM 33 H2 HOH A 11 1.902 1.874 -8.980 1.00 0.00 H -HETATM 34 O HOH A 12 7.173 9.711 -1.885 1.00 0.00 O -HETATM 35 H1 HOH A 12 6.242 9.695 -1.666 1.00 0.00 H -HETATM 36 H2 HOH A 12 7.615 9.468 -1.071 1.00 0.00 H -HETATM 37 O HOH A 13 3.592 0.524 -0.005 1.00 0.00 O -HETATM 38 H1 HOH A 13 3.128 0.507 0.833 1.00 0.00 H -HETATM 39 H2 HOH A 13 2.969 0.153 -0.631 1.00 0.00 H -HETATM 40 O HOH A 14 5.777 -6.025 -16.035 1.00 0.00 O -HETATM 41 H1 HOH A 14 5.287 -6.606 -16.617 1.00 0.00 H -HETATM 42 H2 HOH A 14 5.418 -6.199 -15.165 1.00 0.00 H -HETATM 43 O HOH A 15 4.865 1.117 -5.748 1.00 0.00 O -HETATM 44 H1 HOH A 15 5.704 1.568 -5.840 1.00 0.00 H -HETATM 45 H2 HOH A 15 4.356 1.398 -6.508 1.00 0.00 H -HETATM 46 O HOH A 16 12.203 -4.590 -4.243 1.00 0.00 O -HETATM 47 H1 HOH A 16 12.022 -4.421 -5.168 1.00 0.00 H -HETATM 48 H2 HOH A 16 12.114 -5.539 -4.151 1.00 0.00 H -HETATM 49 O HOH A 17 -2.146 9.188 -4.417 1.00 0.00 O -HETATM 50 H1 HOH A 17 -2.255 8.239 -4.350 1.00 0.00 H -HETATM 51 H2 HOH A 17 -2.296 9.510 -3.528 1.00 0.00 H -HETATM 52 O HOH A 18 -2.197 2.371 -13.304 1.00 0.00 O -HETATM 53 H1 HOH A 18 -1.815 2.574 -12.450 1.00 0.00 H -HETATM 54 H2 HOH A 18 -3.068 2.029 -13.102 1.00 0.00 H -HETATM 55 O HOH A 19 -7.334 -6.353 -19.904 1.00 0.00 O -HETATM 56 H1 HOH A 19 -7.385 -6.526 -20.844 1.00 0.00 H -HETATM 57 H2 HOH A 19 -8.008 -5.692 -19.745 1.00 0.00 H -HETATM 58 O HOH A 20 4.373 -2.305 -7.191 1.00 0.00 O -HETATM 59 H1 HOH A 20 3.733 -2.980 -7.416 1.00 0.00 H -HETATM 60 H2 HOH A 20 4.021 -1.895 -6.401 1.00 0.00 H -HETATM 61 O HOH A 21 0.850 7.039 -12.376 1.00 0.00 O -HETATM 62 H1 HOH A 21 1.393 6.450 -12.900 1.00 0.00 H -HETATM 63 H2 HOH A 21 1.432 7.765 -12.152 1.00 0.00 H -HETATM 64 O HOH A 22 -7.113 19.326 -14.842 1.00 0.00 O -HETATM 65 H1 HOH A 22 -6.707 18.539 -14.478 1.00 0.00 H -HETATM 66 H2 HOH A 22 -6.423 19.989 -14.809 1.00 0.00 H -HETATM 67 O HOH A 23 4.825 -7.319 1.498 1.00 0.00 O -HETATM 68 H1 HOH A 23 4.137 -6.673 1.338 1.00 0.00 H -HETATM 69 H2 HOH A 23 4.685 -7.989 0.828 1.00 0.00 H -HETATM 70 O HOH A 24 1.882 2.504 -5.598 1.00 0.00 O -HETATM 71 H1 HOH A 24 1.815 2.500 -6.553 1.00 0.00 H -HETATM 72 H2 HOH A 24 1.656 1.611 -5.338 1.00 0.00 H -HETATM 73 O HOH A 25 4.755 -7.149 -3.488 1.00 0.00 O -HETATM 74 H1 HOH A 25 4.755 -8.002 -3.054 1.00 0.00 H -HETATM 75 H2 HOH A 25 3.988 -6.699 -3.134 1.00 0.00 H -HETATM 76 O HOH A 26 -2.320 -19.034 3.560 1.00 0.00 O -HETATM 77 H1 HOH A 26 -1.860 -19.713 3.067 1.00 0.00 H -HETATM 78 H2 HOH A 26 -2.640 -19.481 4.344 1.00 0.00 H -HETATM 79 O HOH A 27 1.954 -17.056 -12.651 1.00 0.00 O -HETATM 80 H1 HOH A 27 1.818 -17.424 -13.524 1.00 0.00 H -HETATM 81 H2 HOH A 27 1.074 -16.845 -12.340 1.00 0.00 H -HETATM 82 O HOH A 28 -1.256 6.606 -4.102 1.00 0.00 O -HETATM 83 H1 HOH A 28 -0.544 6.421 -3.490 1.00 0.00 H -HETATM 84 H2 HOH A 28 -1.315 5.822 -4.647 1.00 0.00 H -HETATM 85 O HOH A 29 -11.349 4.061 4.468 1.00 0.00 O -HETATM 86 H1 HOH A 29 -12.089 4.408 3.970 1.00 0.00 H -HETATM 87 H2 HOH A 29 -11.733 3.387 5.030 1.00 0.00 H -HETATM 88 O HOH A 30 -9.494 -21.738 3.938 1.00 0.00 O -HETATM 89 H1 HOH A 30 -8.844 -21.152 4.326 1.00 0.00 H -HETATM 90 H2 HOH A 30 -10.302 -21.552 4.418 1.00 0.00 H -HETATM 91 O HOH A 31 -8.514 -10.224 -11.650 1.00 0.00 O -HETATM 92 H1 HOH A 31 -9.321 -10.406 -11.169 1.00 0.00 H -HETATM 93 H2 HOH A 31 -8.809 -9.847 -12.479 1.00 0.00 H -HETATM 94 O HOH A 32 -2.464 -7.057 -18.300 1.00 0.00 O -HETATM 95 H1 HOH A 32 -2.497 -7.518 -17.462 1.00 0.00 H -HETATM 96 H2 HOH A 32 -3.359 -6.747 -18.438 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.csv b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.csv deleted file mode 100644 index 2f99787..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.csv +++ /dev/null @@ -1,21 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -10,0.010000000000000002,-6418847.674493494,-6418842.482364585,4.33659424776785,0.9572847779134269,0 -20,0.02000000000000001,-6418844.85169128,-6418836.433166506,7.03135972580871,0.9572847779134269,0.644 -30,0.03000000000000002,-6418841.749394401,-6418829.072129624,10.588364515383613,0.9572847779134269,0.647 -40,0.04000000000000003,-6418835.230877744,-6418820.101242626,12.636644767826354,0.9572847779134269,0.712 -50,0.05000000000000004,-6418833.321988653,-6418813.527799772,16.532595228908257,0.9572847779134269,0.769 -60,0.060000000000000046,-6418828.55555613,-6418806.277043996,18.60756334114905,0.9572847779134269,0.737 -70,0.07000000000000005,-6418826.943688804,-6418798.506163325,23.751723339978557,0.9572847779134269,0.726 -80,0.08000000000000006,-6418824.790985219,-6418790.84925289,28.348972787849934,0.9572847779134269,0.754 -90,0.09000000000000007,-6418820.629863649,-6418785.529990833,29.316280313945434,0.9572847779134269,0.772 -100,0.10000000000000007,-6418817.532574512,-6418778.362349451,32.715938998263766,0.9572847779134269,0.791 -110,0.11000000000000008,-6418814.4305906175,-6418771.387409348,35.95072763772382,0.9572847779134269,0.786 -120,0.12000000000000009,-6418815.571104119,-6418764.508318972,42.64889878239572,0.9572847779134269,0.794 -130,0.1300000000000001,-6418806.118362962,-6418753.580852458,43.88062580853108,0.9572847779134269,0.753 -140,0.1400000000000001,-6418808.277013242,-6418747.332835074,50.90208218383567,0.9572847779134269,0.761 -150,0.1500000000000001,-6418798.9757563155,-6418738.536535053,50.480329709890256,0.9572847779134269,0.767 -160,0.16000000000000011,-6418795.682226244,-6418729.882615181,54.957459607832824,0.9572847779134269,0.779 -170,0.17000000000000012,-6418794.022472376,-6418720.348711364,61.5341440403288,0.9572847779134269,0.783 -180,0.18000000000000013,-6418783.796973854,-6418710.415261942,61.29021742231453,0.9572847779134269,0.79 -190,0.19000000000000014,-6418777.727589161,-6418705.338203122,60.46140235469333,0.9572847779134269,0.793 -200,0.20000000000000015,-6418775.90351872,-6418694.375462745,68.09424509779846,0.9572847779134269,0.784 diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.dcd b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.dcd deleted file mode 100644 index 2aa0643..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.pdb b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.pdb deleted file mode 100644 index 087fb0d..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NVT.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 1.434 -3.688 18.270 1.00 0.00 O -HETATM 2 H1 HOH A 1 1.790 -4.576 18.246 1.00 0.00 H -HETATM 3 H2 HOH A 1 1.624 -3.329 17.403 1.00 0.00 H -HETATM 4 O HOH A 2 -7.137 3.819 -4.454 1.00 0.00 O -HETATM 5 H1 HOH A 2 -6.669 4.649 -4.542 1.00 0.00 H -HETATM 6 H2 HOH A 2 -7.408 3.600 -5.345 1.00 0.00 H -HETATM 7 O HOH A 3 -8.138 -11.170 0.141 1.00 0.00 O -HETATM 8 H1 HOH A 3 -8.785 -10.488 -0.042 1.00 0.00 H -HETATM 9 H2 HOH A 3 -8.226 -11.785 -0.587 1.00 0.00 H -HETATM 10 O HOH A 4 -10.283 -9.206 -4.361 1.00 0.00 O -HETATM 11 H1 HOH A 4 -11.235 -9.298 -4.370 1.00 0.00 H -HETATM 12 H2 HOH A 4 -10.127 -8.356 -3.949 1.00 0.00 H -HETATM 13 O HOH A 5 -8.242 3.492 10.748 1.00 0.00 O -HETATM 14 H1 HOH A 5 -7.996 3.708 9.849 1.00 0.00 H -HETATM 15 H2 HOH A 5 -9.199 3.468 10.736 1.00 0.00 H -HETATM 16 O HOH A 6 4.252 4.143 2.065 1.00 0.00 O -HETATM 17 H1 HOH A 6 4.480 4.173 1.136 1.00 0.00 H -HETATM 18 H2 HOH A 6 3.349 4.457 2.100 1.00 0.00 H -HETATM 19 O HOH A 7 -7.970 -6.249 18.133 1.00 0.00 O -HETATM 20 H1 HOH A 7 -7.556 -6.099 17.283 1.00 0.00 H -HETATM 21 H2 HOH A 7 -8.888 -6.423 17.925 1.00 0.00 H -HETATM 22 O HOH A 8 3.158 -2.906 12.282 1.00 0.00 O -HETATM 23 H1 HOH A 8 4.090 -3.051 12.117 1.00 0.00 H -HETATM 24 H2 HOH A 8 2.816 -2.572 11.453 1.00 0.00 H -HETATM 25 O HOH A 9 -21.200 -2.995 -0.512 1.00 0.00 O -HETATM 26 H1 HOH A 9 -20.426 -3.432 -0.867 1.00 0.00 H -HETATM 27 H2 HOH A 9 -21.563 -3.621 0.114 1.00 0.00 H -HETATM 28 O HOH A 10 -11.637 -10.925 7.660 1.00 0.00 O -HETATM 29 H1 HOH A 10 -11.633 -11.658 8.276 1.00 0.00 H -HETATM 30 H2 HOH A 10 -12.564 -10.730 7.524 1.00 0.00 H -HETATM 31 O HOH A 11 -0.541 -16.952 -2.516 1.00 0.00 O -HETATM 32 H1 HOH A 11 -0.511 -16.805 -1.571 1.00 0.00 H -HETATM 33 H2 HOH A 11 -1.347 -16.521 -2.801 1.00 0.00 H -HETATM 34 O HOH A 12 -6.985 0.627 7.450 1.00 0.00 O -HETATM 35 H1 HOH A 12 -7.087 1.003 6.575 1.00 0.00 H -HETATM 36 H2 HOH A 12 -7.876 0.575 7.794 1.00 0.00 H -HETATM 37 O HOH A 13 -10.956 -6.373 10.069 1.00 0.00 O -HETATM 38 H1 HOH A 13 -11.465 -7.142 10.327 1.00 0.00 H -HETATM 39 H2 HOH A 13 -11.452 -5.630 10.413 1.00 0.00 H -HETATM 40 O HOH A 14 -14.287 -2.091 1.742 1.00 0.00 O -HETATM 41 H1 HOH A 14 -13.743 -2.522 1.083 1.00 0.00 H -HETATM 42 H2 HOH A 14 -13.766 -1.341 2.030 1.00 0.00 H -HETATM 43 O HOH A 15 -14.341 10.855 2.273 1.00 0.00 O -HETATM 44 H1 HOH A 15 -15.184 10.638 1.875 1.00 0.00 H -HETATM 45 H2 HOH A 15 -14.526 10.914 3.211 1.00 0.00 H -HETATM 46 O HOH A 16 -10.885 -2.801 5.754 1.00 0.00 O -HETATM 47 H1 HOH A 16 -11.739 -3.098 5.441 1.00 0.00 H -HETATM 48 H2 HOH A 16 -11.088 -2.116 6.391 1.00 0.00 H -HETATM 49 O HOH A 17 -13.952 -3.496 -1.121 1.00 0.00 O -HETATM 50 H1 HOH A 17 -14.719 -4.063 -1.036 1.00 0.00 H -HETATM 51 H2 HOH A 17 -14.093 -3.023 -1.941 1.00 0.00 H -HETATM 52 O HOH A 18 -3.401 1.345 5.430 1.00 0.00 O -HETATM 53 H1 HOH A 18 -3.425 0.691 6.129 1.00 0.00 H -HETATM 54 H2 HOH A 18 -3.753 2.139 5.832 1.00 0.00 H -HETATM 55 O HOH A 19 -15.349 3.838 -20.869 1.00 0.00 O -HETATM 56 H1 HOH A 19 -16.275 3.618 -20.968 1.00 0.00 H -HETATM 57 H2 HOH A 19 -14.902 2.992 -20.849 1.00 0.00 H -HETATM 58 O HOH A 20 0.486 -19.399 8.828 1.00 0.00 O -HETATM 59 H1 HOH A 20 -0.125 -19.821 8.224 1.00 0.00 H -HETATM 60 H2 HOH A 20 -0.027 -18.704 9.242 1.00 0.00 H -HETATM 61 O HOH A 21 8.169 -4.387 11.746 1.00 0.00 O -HETATM 62 H1 HOH A 21 7.572 -4.949 12.239 1.00 0.00 H -HETATM 63 H2 HOH A 21 8.676 -3.929 12.417 1.00 0.00 H -HETATM 64 O HOH A 22 -7.844 0.200 14.597 1.00 0.00 O -HETATM 65 H1 HOH A 22 -8.747 0.311 14.894 1.00 0.00 H -HETATM 66 H2 HOH A 22 -7.882 0.347 13.652 1.00 0.00 H -HETATM 67 O HOH A 23 -14.233 -0.743 -2.850 1.00 0.00 O -HETATM 68 H1 HOH A 23 -14.941 -0.513 -2.249 1.00 0.00 H -HETATM 69 H2 HOH A 23 -14.660 -0.821 -3.704 1.00 0.00 H -HETATM 70 O HOH A 24 -11.457 -11.225 11.423 1.00 0.00 O -HETATM 71 H1 HOH A 24 -10.808 -11.599 12.019 1.00 0.00 H -HETATM 72 H2 HOH A 24 -11.322 -11.691 10.598 1.00 0.00 H -HETATM 73 O HOH A 25 -13.632 6.475 5.291 1.00 0.00 O -HETATM 74 H1 HOH A 25 -13.791 5.870 4.566 1.00 0.00 H -HETATM 75 H2 HOH A 25 -13.884 7.332 4.947 1.00 0.00 H -HETATM 76 O HOH A 26 -12.920 -5.668 7.280 1.00 0.00 O -HETATM 77 H1 HOH A 26 -13.562 -5.143 6.802 1.00 0.00 H -HETATM 78 H2 HOH A 26 -12.760 -5.176 8.086 1.00 0.00 H -HETATM 79 O HOH A 27 -20.030 7.072 13.158 1.00 0.00 O -HETATM 80 H1 HOH A 27 -19.078 7.093 13.060 1.00 0.00 H -HETATM 81 H2 HOH A 27 -20.173 7.012 14.103 1.00 0.00 H -HETATM 82 O HOH A 28 -3.530 4.132 3.530 1.00 0.00 O -HETATM 83 H1 HOH A 28 -3.611 3.250 3.893 1.00 0.00 H -HETATM 84 H2 HOH A 28 -4.315 4.244 2.994 1.00 0.00 H -HETATM 85 O HOH A 29 -27.246 -9.122 11.694 1.00 0.00 O -HETATM 86 H1 HOH A 29 -27.657 -9.724 11.073 1.00 0.00 H -HETATM 87 H2 HOH A 29 -27.378 -8.255 11.310 1.00 0.00 H -HETATM 88 O HOH A 30 -12.358 -8.631 10.623 1.00 0.00 O -HETATM 89 H1 HOH A 30 -13.126 -8.721 11.187 1.00 0.00 H -HETATM 90 H2 HOH A 30 -11.790 -9.360 10.871 1.00 0.00 H -HETATM 91 O HOH A 31 -15.160 -1.244 4.456 1.00 0.00 O -HETATM 92 H1 HOH A 31 -15.631 -0.422 4.586 1.00 0.00 H -HETATM 93 H2 HOH A 31 -15.631 -1.682 3.747 1.00 0.00 H -HETATM 94 O HOH A 32 2.189 7.474 5.937 1.00 0.00 O -HETATM 95 H1 HOH A 32 1.243 7.508 5.794 1.00 0.00 H -HETATM 96 H2 HOH A 32 2.499 8.347 5.696 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.csv b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.csv deleted file mode 100644 index 24011a8..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.csv +++ /dev/null @@ -1,21 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -10,0.010000000000000002,-6418821.62765647,-6418816.951357877,3.9057600326562056,0.9572847779134269,0 -20,0.02000000000000001,-6418818.105022151,-6418808.728643116,7.831383252459932,0.9572847779134269,0.694 -30,0.03000000000000002,-6418814.988953978,-6418802.304205926,10.59461473145252,0.9530433938311458,0.709 -40,0.04000000000000003,-6418811.98743793,-6418796.153212993,13.225135578785604,0.9530433938311458,0.756 -50,0.05000000000000004,-6418807.764345537,-6418788.6980998665,15.924599087443207,0.9530433938311458,0.753 -60,0.060000000000000046,-6418806.451377881,-6418782.178483152,20.273320921628518,0.9530433938311458,0.778 -70,0.07000000000000005,-6418805.834486523,-6418777.9657070935,23.276692597905644,0.9530433938311458,0.803 -80,0.08000000000000006,-6418799.640221234,-6418771.015043015,23.908455541916332,0.9583009197297966,0.783 -90,0.09000000000000007,-6418797.470616516,-6418762.876153222,28.894149803669556,0.9583009197297966,0.796 -100,0.10000000000000007,-6418794.148604906,-6418753.568862343,33.89320281312528,0.9672516835604682,0.789 -110,0.11000000000000008,-6418791.126431917,-6418747.216494099,36.674664104990576,0.9672516835604682,0.793 -120,0.12000000000000009,-6418788.098938202,-6418743.258676267,37.45169377448532,0.9672516835604682,0.797 -130,0.1300000000000001,-6418782.640185188,-6418734.321398234,40.35704374779846,0.9628589753899083,0.778 -140,0.1400000000000001,-6418777.704115365,-6418728.132884771,41.403115596292245,0.9628589753899083,0.786 -150,0.1500000000000001,-6418776.767980381,-6418723.137969872,44.79310878414189,0.9694409045776496,0.777 -160,0.16000000000000011,-6418776.393964564,-6418712.856322274,53.06820744550985,0.9694409045776496,0.785 -170,0.17000000000000012,-6418768.13337926,-6418704.163090646,53.4295643358354,0.9694409045776496,0.792 -180,0.18000000000000013,-6418764.422328605,-6418690.427227856,61.80253492194611,0.9694409045776496,0.792 -190,0.19000000000000014,-6418758.796755148,-6418682.543532678,63.688573930868245,0.9694409045776496,0.796 -200,0.20000000000000015,-6418745.575687273,-6418673.701287883,60.03127279112524,0.9601807061903109,0.791 diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.dcd b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.dcd deleted file mode 100644 index 0c3c984..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.pdb b/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.pdb deleted file mode 100644 index 603f4f7..0000000 --- a/test_stability_protocol/waterbox_10A_ani1ccx_torchani_NpT.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -8.477 -0.126 -0.942 1.00 0.00 O -HETATM 2 H1 HOH A 1 -8.024 -0.362 -1.751 1.00 0.00 H -HETATM 3 H2 HOH A 1 -8.619 -0.960 -0.494 1.00 0.00 H -HETATM 4 O HOH A 2 -8.680 -0.197 2.205 1.00 0.00 O -HETATM 5 H1 HOH A 2 -9.589 -0.021 1.963 1.00 0.00 H -HETATM 6 H2 HOH A 2 -8.305 -0.625 1.435 1.00 0.00 H -HETATM 7 O HOH A 3 -6.277 -7.072 -7.816 1.00 0.00 O -HETATM 8 H1 HOH A 3 -5.492 -7.553 -7.551 1.00 0.00 H -HETATM 9 H2 HOH A 3 -5.954 -6.393 -8.408 1.00 0.00 H -HETATM 10 O HOH A 4 -12.691 -17.597 -4.985 1.00 0.00 O -HETATM 11 H1 HOH A 4 -13.569 -17.885 -4.735 1.00 0.00 H -HETATM 12 H2 HOH A 4 -12.545 -16.803 -4.472 1.00 0.00 H -HETATM 13 O HOH A 5 -10.255 5.459 -13.675 1.00 0.00 O -HETATM 14 H1 HOH A 5 -10.599 5.376 -14.564 1.00 0.00 H -HETATM 15 H2 HOH A 5 -9.413 5.901 -13.784 1.00 0.00 H -HETATM 16 O HOH A 6 -8.136 -12.809 5.593 1.00 0.00 O -HETATM 17 H1 HOH A 6 -8.831 -12.181 5.398 1.00 0.00 H -HETATM 18 H2 HOH A 6 -7.325 -12.329 5.424 1.00 0.00 H -HETATM 19 O HOH A 7 -3.285 -0.611 3.911 1.00 0.00 O -HETATM 20 H1 HOH A 7 -2.607 -0.846 3.277 1.00 0.00 H -HETATM 21 H2 HOH A 7 -3.412 0.330 3.789 1.00 0.00 H -HETATM 22 O HOH A 8 -18.992 7.436 10.010 1.00 0.00 O -HETATM 23 H1 HOH A 8 -18.188 7.066 9.646 1.00 0.00 H -HETATM 24 H2 HOH A 8 -19.528 6.674 10.229 1.00 0.00 H -HETATM 25 O HOH A 9 -4.422 -1.563 1.087 1.00 0.00 O -HETATM 26 H1 HOH A 9 -4.828 -2.264 1.597 1.00 0.00 H -HETATM 27 H2 HOH A 9 -4.424 -1.889 0.187 1.00 0.00 H -HETATM 28 O HOH A 10 -16.533 -6.310 7.870 1.00 0.00 O -HETATM 29 H1 HOH A 10 -17.347 -6.751 8.116 1.00 0.00 H -HETATM 30 H2 HOH A 10 -16.664 -6.060 6.955 1.00 0.00 H -HETATM 31 O HOH A 11 -12.194 -2.646 5.569 1.00 0.00 O -HETATM 32 H1 HOH A 11 -11.772 -2.171 6.285 1.00 0.00 H -HETATM 33 H2 HOH A 11 -12.337 -1.984 4.893 1.00 0.00 H -HETATM 34 O HOH A 12 5.222 6.456 5.419 1.00 0.00 O -HETATM 35 H1 HOH A 12 5.030 7.392 5.364 1.00 0.00 H -HETATM 36 H2 HOH A 12 6.178 6.405 5.403 1.00 0.00 H -HETATM 37 O HOH A 13 -0.130 4.097 3.714 1.00 0.00 O -HETATM 38 H1 HOH A 13 0.824 4.183 3.699 1.00 0.00 H -HETATM 39 H2 HOH A 13 -0.285 3.152 3.704 1.00 0.00 H -HETATM 40 O HOH A 14 -0.624 5.580 1.544 1.00 0.00 O -HETATM 41 H1 HOH A 14 -0.413 5.223 2.407 1.00 0.00 H -HETATM 42 H2 HOH A 14 -0.642 4.818 0.966 1.00 0.00 H -HETATM 43 O HOH A 15 -9.439 9.318 -5.306 1.00 0.00 O -HETATM 44 H1 HOH A 15 -10.192 9.877 -5.498 1.00 0.00 H -HETATM 45 H2 HOH A 15 -8.905 9.354 -6.099 1.00 0.00 H -HETATM 46 O HOH A 16 -5.980 8.750 -5.758 1.00 0.00 O -HETATM 47 H1 HOH A 16 -5.114 8.874 -6.145 1.00 0.00 H -HETATM 48 H2 HOH A 16 -6.392 8.077 -6.299 1.00 0.00 H -HETATM 49 O HOH A 17 -11.658 -1.578 1.765 1.00 0.00 O -HETATM 50 H1 HOH A 17 -11.303 -2.461 1.867 1.00 0.00 H -HETATM 51 H2 HOH A 17 -12.594 -1.712 1.615 1.00 0.00 H -HETATM 52 O HOH A 18 1.622 12.488 -0.166 1.00 0.00 O -HETATM 53 H1 HOH A 18 1.373 11.587 -0.371 1.00 0.00 H -HETATM 54 H2 HOH A 18 2.156 12.415 0.626 1.00 0.00 H -HETATM 55 O HOH A 19 -11.051 1.289 -16.995 1.00 0.00 O -HETATM 56 H1 HOH A 19 -11.544 1.798 -16.351 1.00 0.00 H -HETATM 57 H2 HOH A 19 -11.611 1.278 -17.772 1.00 0.00 H -HETATM 58 O HOH A 20 -11.992 -0.929 7.864 1.00 0.00 O -HETATM 59 H1 HOH A 20 -11.768 -0.026 7.642 1.00 0.00 H -HETATM 60 H2 HOH A 20 -11.497 -1.110 8.663 1.00 0.00 H -HETATM 61 O HOH A 21 15.577 -8.360 -12.726 1.00 0.00 O -HETATM 62 H1 HOH A 21 14.925 -7.664 -12.639 1.00 0.00 H -HETATM 63 H2 HOH A 21 16.398 -7.955 -12.449 1.00 0.00 H -HETATM 64 O HOH A 22 -7.802 2.219 14.249 1.00 0.00 O -HETATM 65 H1 HOH A 22 -7.230 2.606 13.587 1.00 0.00 H -HETATM 66 H2 HOH A 22 -8.275 1.529 13.784 1.00 0.00 H -HETATM 67 O HOH A 23 -0.095 -5.105 9.020 1.00 0.00 O -HETATM 68 H1 HOH A 23 0.641 -5.701 9.158 1.00 0.00 H -HETATM 69 H2 HOH A 23 0.089 -4.688 8.178 1.00 0.00 H -HETATM 70 O HOH A 24 -5.831 6.410 2.815 1.00 0.00 O -HETATM 71 H1 HOH A 24 -5.598 6.219 3.724 1.00 0.00 H -HETATM 72 H2 HOH A 24 -6.018 5.553 2.431 1.00 0.00 H -HETATM 73 O HOH A 25 -5.284 -5.493 0.216 1.00 0.00 O -HETATM 74 H1 HOH A 25 -4.904 -4.676 -0.107 1.00 0.00 H -HETATM 75 H2 HOH A 25 -5.564 -5.956 -0.574 1.00 0.00 H -HETATM 76 O HOH A 26 -1.316 2.134 0.263 1.00 0.00 O -HETATM 77 H1 HOH A 26 -0.434 1.799 0.104 1.00 0.00 H -HETATM 78 H2 HOH A 26 -1.575 2.532 -0.568 1.00 0.00 H -HETATM 79 O HOH A 27 -13.885 11.357 21.844 1.00 0.00 O -HETATM 80 H1 HOH A 27 -14.218 10.500 21.576 1.00 0.00 H -HETATM 81 H2 HOH A 27 -13.439 11.694 21.067 1.00 0.00 H -HETATM 82 O HOH A 28 -13.894 7.145 -1.744 1.00 0.00 O -HETATM 83 H1 HOH A 28 -13.887 6.645 -2.561 1.00 0.00 H -HETATM 84 H2 HOH A 28 -13.286 7.867 -1.901 1.00 0.00 H -HETATM 85 O HOH A 29 -16.766 -0.005 6.826 1.00 0.00 O -HETATM 86 H1 HOH A 29 -16.551 -0.328 5.951 1.00 0.00 H -HETATM 87 H2 HOH A 29 -15.966 0.426 7.126 1.00 0.00 H -HETATM 88 O HOH A 30 -11.459 -16.887 -2.494 1.00 0.00 O -HETATM 89 H1 HOH A 30 -11.212 -15.994 -2.255 1.00 0.00 H -HETATM 90 H2 HOH A 30 -10.668 -17.260 -2.882 1.00 0.00 H -HETATM 91 O HOH A 31 -16.513 -2.873 -1.178 1.00 0.00 O -HETATM 92 H1 HOH A 31 -15.671 -3.150 -1.540 1.00 0.00 H -HETATM 93 H2 HOH A 31 -16.483 -1.917 -1.206 1.00 0.00 H -HETATM 94 O HOH A 32 -8.973 -8.045 -3.242 1.00 0.00 O -HETATM 95 H1 HOH A 32 -8.781 -7.799 -4.146 1.00 0.00 H -HETATM 96 H2 HOH A 32 -8.459 -8.839 -3.095 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.csv b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.csv deleted file mode 100644 index 637e833..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.csv +++ /dev/null @@ -1,3 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -1,0.001,-6418749.221510459,-6418723.504256407,21.47968548638624,0.9572847779134269,0 -2,0.002,-6418749.2751089595,-6418663.43656788,71.69446867417204,0.9572847779134269,1.74 diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.dcd b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.dcd deleted file mode 100644 index f86c448..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.pdb b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.pdb deleted file mode 100644 index 7695484..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVE.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-10-21 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 0.094 -10.498 -4.887 1.00 0.00 O -HETATM 2 H1 HOH A 1 0.015 -11.347 -4.452 1.00 0.00 H -HETATM 3 H2 HOH A 1 -0.786 -10.123 -4.842 1.00 0.00 H -HETATM 4 O HOH A 2 5.950 -7.526 -7.414 1.00 0.00 O -HETATM 5 H1 HOH A 2 6.698 -7.146 -6.953 1.00 0.00 H -HETATM 6 H2 HOH A 2 6.189 -7.479 -8.340 1.00 0.00 H -HETATM 7 O HOH A 3 -3.814 -0.862 7.631 1.00 0.00 O -HETATM 8 H1 HOH A 3 -3.193 -0.896 8.359 1.00 0.00 H -HETATM 9 H2 HOH A 3 -4.636 -1.181 8.003 1.00 0.00 H -HETATM 10 O HOH A 4 10.517 -0.431 -20.997 1.00 0.00 O -HETATM 11 H1 HOH A 4 10.790 0.479 -20.881 1.00 0.00 H -HETATM 12 H2 HOH A 4 10.869 -0.886 -20.232 1.00 0.00 H -HETATM 13 O HOH A 5 7.890 -0.064 -10.272 1.00 0.00 O -HETATM 14 H1 HOH A 5 8.755 -0.245 -10.639 1.00 0.00 H -HETATM 15 H2 HOH A 5 7.907 0.870 -10.064 1.00 0.00 H -HETATM 16 O HOH A 6 8.066 -3.469 -3.462 1.00 0.00 O -HETATM 17 H1 HOH A 6 7.876 -3.306 -2.538 1.00 0.00 H -HETATM 18 H2 HOH A 6 7.388 -2.985 -3.935 1.00 0.00 H -HETATM 19 O HOH A 7 3.243 -0.314 -13.277 1.00 0.00 O -HETATM 20 H1 HOH A 7 2.429 -0.717 -12.975 1.00 0.00 H -HETATM 21 H2 HOH A 7 3.597 -0.936 -13.913 1.00 0.00 H -HETATM 22 O HOH A 8 3.702 -5.911 2.506 1.00 0.00 O -HETATM 23 H1 HOH A 8 3.188 -5.747 1.715 1.00 0.00 H -HETATM 24 H2 HOH A 8 4.215 -6.692 2.302 1.00 0.00 H -HETATM 25 O HOH A 9 -5.644 5.435 -3.084 1.00 0.00 O -HETATM 26 H1 HOH A 9 -6.223 5.567 -2.334 1.00 0.00 H -HETATM 27 H2 HOH A 9 -5.546 4.484 -3.147 1.00 0.00 H -HETATM 28 O HOH A 10 16.499 -4.669 8.834 1.00 0.00 O -HETATM 29 H1 HOH A 10 16.262 -4.526 9.751 1.00 0.00 H -HETATM 30 H2 HOH A 10 15.799 -4.245 8.337 1.00 0.00 H -HETATM 31 O HOH A 11 3.016 6.775 2.837 1.00 0.00 O -HETATM 32 H1 HOH A 11 2.658 7.096 3.665 1.00 0.00 H -HETATM 33 H2 HOH A 11 3.188 5.847 2.995 1.00 0.00 H -HETATM 34 O HOH A 12 -2.800 -7.004 -0.287 1.00 0.00 O -HETATM 35 H1 HOH A 12 -2.946 -6.109 -0.594 1.00 0.00 H -HETATM 36 H2 HOH A 12 -3.225 -7.555 -0.944 1.00 0.00 H -HETATM 37 O HOH A 13 -6.363 -2.575 -10.969 1.00 0.00 O -HETATM 38 H1 HOH A 13 -6.051 -1.803 -10.497 1.00 0.00 H -HETATM 39 H2 HOH A 13 -7.220 -2.761 -10.585 1.00 0.00 H -HETATM 40 O HOH A 14 21.200 -7.037 3.615 1.00 0.00 O -HETATM 41 H1 HOH A 14 21.645 -6.224 3.375 1.00 0.00 H -HETATM 42 H2 HOH A 14 20.508 -7.134 2.961 1.00 0.00 H -HETATM 43 O HOH A 15 9.337 -5.808 1.456 1.00 0.00 O -HETATM 44 H1 HOH A 15 8.803 -5.459 2.170 1.00 0.00 H -HETATM 45 H2 HOH A 15 8.704 -6.173 0.839 1.00 0.00 H -HETATM 46 O HOH A 16 5.628 5.755 1.537 1.00 0.00 O -HETATM 47 H1 HOH A 16 4.930 5.179 1.848 1.00 0.00 H -HETATM 48 H2 HOH A 16 5.213 6.614 1.455 1.00 0.00 H -HETATM 49 O HOH A 17 0.322 2.133 -3.256 1.00 0.00 O -HETATM 50 H1 HOH A 17 0.402 1.675 -4.093 1.00 0.00 H -HETATM 51 H2 HOH A 17 -0.336 2.809 -3.414 1.00 0.00 H -HETATM 52 O HOH A 18 4.703 -0.059 -25.932 1.00 0.00 O -HETATM 53 H1 HOH A 18 5.119 0.461 -26.620 1.00 0.00 H -HETATM 54 H2 HOH A 18 3.797 -0.159 -26.222 1.00 0.00 H -HETATM 55 O HOH A 19 7.826 -4.861 -6.525 1.00 0.00 O -HETATM 56 H1 HOH A 19 7.872 -4.102 -5.943 1.00 0.00 H -HETATM 57 H2 HOH A 19 7.157 -4.630 -7.169 1.00 0.00 H -HETATM 58 O HOH A 20 1.784 -5.292 10.567 1.00 0.00 O -HETATM 59 H1 HOH A 20 1.665 -4.668 9.850 1.00 0.00 H -HETATM 60 H2 HOH A 20 0.894 -5.510 10.845 1.00 0.00 H -HETATM 61 O HOH A 21 16.645 -1.761 4.879 1.00 0.00 O -HETATM 62 H1 HOH A 21 16.168 -1.281 4.201 1.00 0.00 H -HETATM 63 H2 HOH A 21 16.230 -1.494 5.699 1.00 0.00 H -HETATM 64 O HOH A 22 5.299 -20.723 -9.428 1.00 0.00 O -HETATM 65 H1 HOH A 22 6.226 -20.484 -9.417 1.00 0.00 H -HETATM 66 H2 HOH A 22 4.839 -19.906 -9.234 1.00 0.00 H -HETATM 67 O HOH A 23 -8.311 8.327 -8.855 1.00 0.00 O -HETATM 68 H1 HOH A 23 -8.443 9.049 -8.240 1.00 0.00 H -HETATM 69 H2 HOH A 23 -7.837 7.666 -8.350 1.00 0.00 H -HETATM 70 O HOH A 24 4.183 11.967 0.002 1.00 0.00 O -HETATM 71 H1 HOH A 24 4.687 12.416 -0.677 1.00 0.00 H -HETATM 72 H2 HOH A 24 3.270 12.087 -0.257 1.00 0.00 H -HETATM 73 O HOH A 25 3.759 -17.677 6.933 1.00 0.00 O -HETATM 74 H1 HOH A 25 2.895 -17.319 6.727 1.00 0.00 H -HETATM 75 H2 HOH A 25 3.668 -18.619 6.794 1.00 0.00 H -HETATM 76 O HOH A 26 16.347 -8.205 -12.519 1.00 0.00 O -HETATM 77 H1 HOH A 26 16.492 -9.122 -12.751 1.00 0.00 H -HETATM 78 H2 HOH A 26 15.567 -7.953 -13.013 1.00 0.00 H -HETATM 79 O HOH A 27 -7.653 -3.083 5.531 1.00 0.00 O -HETATM 80 H1 HOH A 27 -6.786 -3.276 5.888 1.00 0.00 H -HETATM 81 H2 HOH A 27 -8.144 -3.898 5.637 1.00 0.00 H -HETATM 82 O HOH A 28 -8.176 0.127 -6.905 1.00 0.00 O -HETATM 83 H1 HOH A 28 -8.196 1.084 -6.898 1.00 0.00 H -HETATM 84 H2 HOH A 28 -8.637 -0.129 -6.106 1.00 0.00 H -HETATM 85 O HOH A 29 -9.364 -5.200 5.599 1.00 0.00 O -HETATM 86 H1 HOH A 29 -9.229 -6.010 5.106 1.00 0.00 H -HETATM 87 H2 HOH A 29 -10.244 -5.285 5.965 1.00 0.00 H -HETATM 88 O HOH A 30 -8.553 -27.867 -0.891 1.00 0.00 O -HETATM 89 H1 HOH A 30 -8.876 -27.715 -1.779 1.00 0.00 H -HETATM 90 H2 HOH A 30 -8.698 -27.037 -0.437 1.00 0.00 H -HETATM 91 O HOH A 31 -1.794 3.763 6.525 1.00 0.00 O -HETATM 92 H1 HOH A 31 -1.842 4.689 6.761 1.00 0.00 H -HETATM 93 H2 HOH A 31 -2.600 3.384 6.875 1.00 0.00 H -HETATM 94 O HOH A 32 10.915 -23.814 -11.439 1.00 0.00 O -HETATM 95 H1 HOH A 32 10.793 -23.860 -12.387 1.00 0.00 H -HETATM 96 H2 HOH A 32 10.393 -23.060 -11.166 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.csv b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.csv deleted file mode 100644 index 31deea0..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.csv +++ /dev/null @@ -1,3 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -1,0.001,-6418643.6125110295,-6418574.408734663,57.800702509745236,0.9572847779134269,0 -2,0.002,-6418640.063038337,-6418478.001842138,135.35751199934566,0.9572847779134269,2.3 diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.dcd b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.dcd deleted file mode 100644 index 3486366..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.pdb b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.pdb deleted file mode 100644 index 722f701..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NVT.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-10-21 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -6.822 7.512 22.643 1.00 0.00 O -HETATM 2 H1 HOH A 1 -7.075 6.775 22.088 1.00 0.00 H -HETATM 3 H2 HOH A 1 -7.219 7.320 23.493 1.00 0.00 H -HETATM 4 O HOH A 2 -1.934 11.029 7.397 1.00 0.00 O -HETATM 5 H1 HOH A 2 -2.145 11.053 6.464 1.00 0.00 H -HETATM 6 H2 HOH A 2 -2.050 10.112 7.646 1.00 0.00 H -HETATM 7 O HOH A 3 6.083 -3.975 -6.124 1.00 0.00 O -HETATM 8 H1 HOH A 3 6.266 -4.729 -5.564 1.00 0.00 H -HETATM 9 H2 HOH A 3 6.408 -4.231 -6.987 1.00 0.00 H -HETATM 10 O HOH A 4 -1.761 -3.165 10.012 1.00 0.00 O -HETATM 11 H1 HOH A 4 -0.939 -3.241 9.528 1.00 0.00 H -HETATM 12 H2 HOH A 4 -1.744 -3.895 10.631 1.00 0.00 H -HETATM 13 O HOH A 5 20.125 -7.717 6.206 1.00 0.00 O -HETATM 14 H1 HOH A 5 19.469 -8.184 6.725 1.00 0.00 H -HETATM 15 H2 HOH A 5 20.008 -8.049 5.316 1.00 0.00 H -HETATM 16 O HOH A 6 10.231 -6.226 18.680 1.00 0.00 O -HETATM 17 H1 HOH A 6 10.141 -6.384 17.740 1.00 0.00 H -HETATM 18 H2 HOH A 6 10.709 -6.989 19.006 1.00 0.00 H -HETATM 19 O HOH A 7 -5.209 -7.727 4.982 1.00 0.00 O -HETATM 20 H1 HOH A 7 -5.801 -7.809 4.234 1.00 0.00 H -HETATM 21 H2 HOH A 7 -5.702 -8.087 5.719 1.00 0.00 H -HETATM 22 O HOH A 8 -3.890 -1.442 3.106 1.00 0.00 O -HETATM 23 H1 HOH A 8 -3.709 -2.285 3.521 1.00 0.00 H -HETATM 24 H2 HOH A 8 -4.814 -1.490 2.859 1.00 0.00 H -HETATM 25 O HOH A 9 -4.455 -2.808 9.444 1.00 0.00 O -HETATM 26 H1 HOH A 9 -3.604 -2.870 9.878 1.00 0.00 H -HETATM 27 H2 HOH A 9 -4.277 -2.334 8.632 1.00 0.00 H -HETATM 28 O HOH A 10 0.726 6.275 8.922 1.00 0.00 O -HETATM 29 H1 HOH A 10 0.363 5.437 8.635 1.00 0.00 H -HETATM 30 H2 HOH A 10 1.569 6.049 9.316 1.00 0.00 H -HETATM 31 O HOH A 11 -12.561 -5.353 11.982 1.00 0.00 O -HETATM 32 H1 HOH A 11 -11.711 -5.359 12.423 1.00 0.00 H -HETATM 33 H2 HOH A 11 -12.901 -6.240 12.105 1.00 0.00 H -HETATM 34 O HOH A 12 -3.214 -6.275 8.264 1.00 0.00 O -HETATM 35 H1 HOH A 12 -2.926 -7.183 8.168 1.00 0.00 H -HETATM 36 H2 HOH A 12 -2.890 -6.009 9.124 1.00 0.00 H -HETATM 37 O HOH A 13 16.100 7.834 -13.314 1.00 0.00 O -HETATM 38 H1 HOH A 13 17.006 7.558 -13.450 1.00 0.00 H -HETATM 39 H2 HOH A 13 15.589 7.277 -13.902 1.00 0.00 H -HETATM 40 O HOH A 14 -20.535 11.903 3.580 1.00 0.00 O -HETATM 41 H1 HOH A 14 -21.304 11.391 3.829 1.00 0.00 H -HETATM 42 H2 HOH A 14 -20.060 11.342 2.967 1.00 0.00 H -HETATM 43 O HOH A 15 9.952 4.521 2.876 1.00 0.00 O -HETATM 44 H1 HOH A 15 10.687 4.569 2.265 1.00 0.00 H -HETATM 45 H2 HOH A 15 9.988 3.630 3.225 1.00 0.00 H -HETATM 46 O HOH A 16 7.244 10.729 4.816 1.00 0.00 O -HETATM 47 H1 HOH A 16 7.044 9.868 4.448 1.00 0.00 H -HETATM 48 H2 HOH A 16 6.551 11.299 4.481 1.00 0.00 H -HETATM 49 O HOH A 17 3.363 -20.440 10.843 1.00 0.00 O -HETATM 50 H1 HOH A 17 3.523 -21.163 11.449 1.00 0.00 H -HETATM 51 H2 HOH A 17 4.221 -20.247 10.466 1.00 0.00 H -HETATM 52 O HOH A 18 -6.110 9.694 7.222 1.00 0.00 O -HETATM 53 H1 HOH A 18 -6.600 9.275 7.929 1.00 0.00 H -HETATM 54 H2 HOH A 18 -5.486 9.028 6.935 1.00 0.00 H -HETATM 55 O HOH A 19 4.883 1.631 -10.899 1.00 0.00 O -HETATM 56 H1 HOH A 19 4.728 2.574 -10.936 1.00 0.00 H -HETATM 57 H2 HOH A 19 4.459 1.286 -11.685 1.00 0.00 H -HETATM 58 O HOH A 20 3.474 5.413 9.335 1.00 0.00 O -HETATM 59 H1 HOH A 20 4.035 6.153 9.564 1.00 0.00 H -HETATM 60 H2 HOH A 20 3.747 5.169 8.451 1.00 0.00 H -HETATM 61 O HOH A 21 13.096 -8.487 2.835 1.00 0.00 O -HETATM 62 H1 HOH A 21 13.224 -9.030 2.057 1.00 0.00 H -HETATM 63 H2 HOH A 21 12.367 -8.899 3.298 1.00 0.00 H -HETATM 64 O HOH A 22 -0.221 5.154 -14.219 1.00 0.00 O -HETATM 65 H1 HOH A 22 -0.397 4.215 -14.156 1.00 0.00 H -HETATM 66 H2 HOH A 22 -0.660 5.428 -15.024 1.00 0.00 H -HETATM 67 O HOH A 23 -16.340 14.922 16.590 1.00 0.00 O -HETATM 68 H1 HOH A 23 -16.681 14.032 16.675 1.00 0.00 H -HETATM 69 H2 HOH A 23 -15.501 14.815 16.141 1.00 0.00 H -HETATM 70 O HOH A 24 22.828 2.439 7.121 1.00 0.00 O -HETATM 71 H1 HOH A 24 21.908 2.702 7.101 1.00 0.00 H -HETATM 72 H2 HOH A 24 22.804 1.482 7.113 1.00 0.00 H -HETATM 73 O HOH A 25 0.678 -0.633 -4.342 1.00 0.00 O -HETATM 74 H1 HOH A 25 0.910 -0.258 -3.492 1.00 0.00 H -HETATM 75 H2 HOH A 25 0.818 -1.574 -4.236 1.00 0.00 H -HETATM 76 O HOH A 26 6.709 -8.864 11.642 1.00 0.00 O -HETATM 77 H1 HOH A 26 6.592 -9.753 11.977 1.00 0.00 H -HETATM 78 H2 HOH A 26 6.298 -8.877 10.778 1.00 0.00 H -HETATM 79 O HOH A 27 -8.097 6.707 15.415 1.00 0.00 O -HETATM 80 H1 HOH A 27 -8.870 6.256 15.754 1.00 0.00 H -HETATM 81 H2 HOH A 27 -7.377 6.094 15.562 1.00 0.00 H -HETATM 82 O HOH A 28 -13.149 -5.963 -4.313 1.00 0.00 O -HETATM 83 H1 HOH A 28 -13.641 -6.771 -4.455 1.00 0.00 H -HETATM 84 H2 HOH A 28 -13.065 -5.897 -3.362 1.00 0.00 H -HETATM 85 O HOH A 29 1.130 1.028 9.357 1.00 0.00 O -HETATM 86 H1 HOH A 29 0.335 0.621 9.702 1.00 0.00 H -HETATM 87 H2 HOH A 29 1.843 0.608 9.838 1.00 0.00 H -HETATM 88 O HOH A 30 -7.700 14.393 11.736 1.00 0.00 O -HETATM 89 H1 HOH A 30 -7.430 14.726 10.880 1.00 0.00 H -HETATM 90 H2 HOH A 30 -7.274 13.538 11.805 1.00 0.00 H -HETATM 91 O HOH A 31 0.763 -10.251 3.081 1.00 0.00 O -HETATM 92 H1 HOH A 31 0.664 -10.371 4.026 1.00 0.00 H -HETATM 93 H2 HOH A 31 1.341 -10.963 2.808 1.00 0.00 H -HETATM 94 O HOH A 32 8.957 -0.608 -0.016 1.00 0.00 O -HETATM 95 H1 HOH A 32 8.603 -1.496 -0.038 1.00 0.00 H -HETATM 96 H2 HOH A 32 8.405 -0.145 0.614 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.csv b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.csv deleted file mode 100644 index 5a30c3e..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.csv +++ /dev/null @@ -1,3 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -1,0.001,-6418912.505313673,-6418846.515180118,55.11658869562019,0.9572847779134269,0 -2,0.002,-6418927.134887553,-6418803.98728133,102.85592096010481,0.9572847779134269,2.15 diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.dcd b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.dcd deleted file mode 100644 index 7bcf2f4..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.pdb b/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.pdb deleted file mode 100644 index d8d5505..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_nnpops_NpT.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-10-21 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -7.915 7.405 2.052 1.00 0.00 O -HETATM 2 H1 HOH A 1 -8.544 7.436 2.772 1.00 0.00 H -HETATM 3 H2 HOH A 1 -8.169 8.128 1.479 1.00 0.00 H -HETATM 4 O HOH A 2 -1.804 5.880 -6.198 1.00 0.00 O -HETATM 5 H1 HOH A 2 -0.956 5.491 -5.987 1.00 0.00 H -HETATM 6 H2 HOH A 2 -1.615 6.809 -6.334 1.00 0.00 H -HETATM 7 O HOH A 3 11.786 4.455 -13.282 1.00 0.00 O -HETATM 8 H1 HOH A 3 11.852 4.095 -12.397 1.00 0.00 H -HETATM 9 H2 HOH A 3 12.581 4.154 -13.723 1.00 0.00 H -HETATM 10 O HOH A 4 0.610 21.497 -6.409 1.00 0.00 O -HETATM 11 H1 HOH A 4 1.473 21.616 -6.805 1.00 0.00 H -HETATM 12 H2 HOH A 4 0.025 21.338 -7.150 1.00 0.00 H -HETATM 13 O HOH A 5 -0.275 29.863 -4.626 1.00 0.00 O -HETATM 14 H1 HOH A 5 0.464 29.261 -4.712 1.00 0.00 H -HETATM 15 H2 HOH A 5 -0.038 30.614 -5.169 1.00 0.00 H -HETATM 16 O HOH A 6 11.263 -8.978 17.983 1.00 0.00 O -HETATM 17 H1 HOH A 6 10.373 -9.137 17.670 1.00 0.00 H -HETATM 18 H2 HOH A 6 11.813 -9.089 17.208 1.00 0.00 H -HETATM 19 O HOH A 7 -1.375 -2.408 10.874 1.00 0.00 O -HETATM 20 H1 HOH A 7 -2.145 -2.037 10.443 1.00 0.00 H -HETATM 21 H2 HOH A 7 -1.477 -2.168 11.795 1.00 0.00 H -HETATM 22 O HOH A 8 -4.885 8.320 -3.198 1.00 0.00 O -HETATM 23 H1 HOH A 8 -4.328 7.609 -3.514 1.00 0.00 H -HETATM 24 H2 HOH A 8 -5.745 7.916 -3.081 1.00 0.00 H -HETATM 25 O HOH A 9 -3.272 -4.157 -2.954 1.00 0.00 O -HETATM 26 H1 HOH A 9 -3.150 -4.203 -3.902 1.00 0.00 H -HETATM 27 H2 HOH A 9 -2.384 -4.120 -2.598 1.00 0.00 H -HETATM 28 O HOH A 10 -8.322 9.817 20.874 1.00 0.00 O -HETATM 29 H1 HOH A 10 -7.871 10.273 21.584 1.00 0.00 H -HETATM 30 H2 HOH A 10 -8.098 10.314 20.088 1.00 0.00 H -HETATM 31 O HOH A 11 6.653 8.966 -0.621 1.00 0.00 O -HETATM 32 H1 HOH A 11 7.073 9.711 -1.050 1.00 0.00 H -HETATM 33 H2 HOH A 11 6.049 8.620 -1.278 1.00 0.00 H -HETATM 34 O HOH A 12 10.711 14.454 4.348 1.00 0.00 O -HETATM 35 H1 HOH A 12 10.746 13.507 4.215 1.00 0.00 H -HETATM 36 H2 HOH A 12 10.892 14.572 5.281 1.00 0.00 H -HETATM 37 O HOH A 13 3.255 11.005 -7.023 1.00 0.00 O -HETATM 38 H1 HOH A 13 3.896 10.726 -7.677 1.00 0.00 H -HETATM 39 H2 HOH A 13 3.738 11.605 -6.454 1.00 0.00 H -HETATM 40 O HOH A 14 2.528 17.331 -12.278 1.00 0.00 O -HETATM 41 H1 HOH A 14 1.697 17.757 -12.070 1.00 0.00 H -HETATM 42 H2 HOH A 14 2.827 16.968 -11.444 1.00 0.00 H -HETATM 43 O HOH A 15 -4.902 10.002 1.283 1.00 0.00 O -HETATM 44 H1 HOH A 15 -4.285 9.603 0.669 1.00 0.00 H -HETATM 45 H2 HOH A 15 -4.803 10.944 1.145 1.00 0.00 H -HETATM 46 O HOH A 16 5.732 -7.902 -2.743 1.00 0.00 O -HETATM 47 H1 HOH A 16 5.587 -7.046 -2.341 1.00 0.00 H -HETATM 48 H2 HOH A 16 5.113 -8.483 -2.301 1.00 0.00 H -HETATM 49 O HOH A 17 -0.944 20.881 1.409 1.00 0.00 O -HETATM 50 H1 HOH A 17 -1.367 21.380 0.710 1.00 0.00 H -HETATM 51 H2 HOH A 17 -0.340 20.295 0.954 1.00 0.00 H -HETATM 52 O HOH A 18 4.642 12.457 4.850 1.00 0.00 O -HETATM 53 H1 HOH A 18 4.986 13.258 4.454 1.00 0.00 H -HETATM 54 H2 HOH A 18 5.053 12.420 5.713 1.00 0.00 H -HETATM 55 O HOH A 19 -0.636 5.586 7.691 1.00 0.00 O -HETATM 56 H1 HOH A 19 0.224 5.204 7.514 1.00 0.00 H -HETATM 57 H2 HOH A 19 -0.448 6.481 7.972 1.00 0.00 H -HETATM 58 O HOH A 20 -1.739 0.707 -2.544 1.00 0.00 O -HETATM 59 H1 HOH A 20 -2.283 1.461 -2.770 1.00 0.00 H -HETATM 60 H2 HOH A 20 -1.506 0.317 -3.386 1.00 0.00 H -HETATM 61 O HOH A 21 4.638 14.582 -1.758 1.00 0.00 O -HETATM 62 H1 HOH A 21 5.032 15.322 -2.220 1.00 0.00 H -HETATM 63 H2 HOH A 21 4.476 14.909 -0.874 1.00 0.00 H -HETATM 64 O HOH A 22 -1.624 8.514 3.452 1.00 0.00 O -HETATM 65 H1 HOH A 22 -1.571 8.664 4.396 1.00 0.00 H -HETATM 66 H2 HOH A 22 -1.612 9.391 3.069 1.00 0.00 H -HETATM 67 O HOH A 23 -17.219 5.888 0.012 1.00 0.00 O -HETATM 68 H1 HOH A 23 -17.585 5.004 0.046 1.00 0.00 H -HETATM 69 H2 HOH A 23 -17.718 6.380 0.664 1.00 0.00 H -HETATM 70 O HOH A 24 -1.515 13.129 9.433 1.00 0.00 O -HETATM 71 H1 HOH A 24 -1.683 14.003 9.784 1.00 0.00 H -HETATM 72 H2 HOH A 24 -1.600 13.230 8.485 1.00 0.00 H -HETATM 73 O HOH A 25 -8.448 13.576 -0.327 1.00 0.00 O -HETATM 74 H1 HOH A 25 -9.328 13.630 0.046 1.00 0.00 H -HETATM 75 H2 HOH A 25 -8.407 12.705 -0.722 1.00 0.00 H -HETATM 76 O HOH A 26 4.672 16.993 2.522 1.00 0.00 O -HETATM 77 H1 HOH A 26 3.781 16.949 2.175 1.00 0.00 H -HETATM 78 H2 HOH A 26 4.961 17.885 2.328 1.00 0.00 H -HETATM 79 O HOH A 27 -0.293 8.137 -1.651 1.00 0.00 O -HETATM 80 H1 HOH A 27 -0.403 8.112 -0.701 1.00 0.00 H -HETATM 81 H2 HOH A 27 -0.775 8.916 -1.929 1.00 0.00 H -HETATM 82 O HOH A 28 -14.453 15.010 -6.062 1.00 0.00 O -HETATM 83 H1 HOH A 28 -14.868 15.800 -6.409 1.00 0.00 H -HETATM 84 H2 HOH A 28 -13.518 15.215 -6.050 1.00 0.00 H -HETATM 85 O HOH A 29 5.145 2.679 0.954 1.00 0.00 O -HETATM 86 H1 HOH A 29 6.056 2.971 0.922 1.00 0.00 H -HETATM 87 H2 HOH A 29 4.637 3.488 1.016 1.00 0.00 H -HETATM 88 O HOH A 30 -6.690 0.485 -3.651 1.00 0.00 O -HETATM 89 H1 HOH A 30 -6.178 1.065 -4.216 1.00 0.00 H -HETATM 90 H2 HOH A 30 -6.062 -0.169 -3.345 1.00 0.00 H -HETATM 91 O HOH A 31 -8.206 8.045 -5.080 1.00 0.00 O -HETATM 92 H1 HOH A 31 -7.377 8.424 -5.373 1.00 0.00 H -HETATM 93 H2 HOH A 31 -7.984 7.572 -4.278 1.00 0.00 H -HETATM 94 O HOH A 32 -13.091 5.230 -8.948 1.00 0.00 O -HETATM 95 H1 HOH A 32 -13.650 5.540 -8.235 1.00 0.00 H -HETATM 96 H2 HOH A 32 -12.487 5.954 -9.111 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.csv b/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.csv deleted file mode 100644 index 25fdc51..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.csv +++ /dev/null @@ -1,3 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -1,0.001,-6418816.666186385,-6418783.952654887,27.323149132236615,0.9572847779134269,0 -2,0.002,-6418821.141465592,-6418704.312545387,97.57839840367095,0.9572847779134269,2.57 diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.dcd b/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.dcd deleted file mode 100644 index 4d98d1a..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.pdb b/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.pdb deleted file mode 100644 index 4f2de46..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVE.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-10-21 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -7.128 0.495 -8.317 1.00 0.00 O -HETATM 2 H1 HOH A 1 -6.710 0.974 -7.601 1.00 0.00 H -HETATM 3 H2 HOH A 1 -7.318 -0.368 -7.949 1.00 0.00 H -HETATM 4 O HOH A 2 21.208 4.560 5.288 1.00 0.00 O -HETATM 5 H1 HOH A 2 21.894 4.172 5.831 1.00 0.00 H -HETATM 6 H2 HOH A 2 21.635 4.739 4.451 1.00 0.00 H -HETATM 7 O HOH A 3 22.638 19.782 -4.724 1.00 0.00 O -HETATM 8 H1 HOH A 3 23.054 19.309 -5.445 1.00 0.00 H -HETATM 9 H2 HOH A 3 23.109 19.493 -3.943 1.00 0.00 H -HETATM 10 O HOH A 4 4.924 -3.946 6.309 1.00 0.00 O -HETATM 11 H1 HOH A 4 5.793 -4.276 6.536 1.00 0.00 H -HETATM 12 H2 HOH A 4 4.326 -4.644 6.577 1.00 0.00 H -HETATM 13 O HOH A 5 -13.318 7.597 1.579 1.00 0.00 O -HETATM 14 H1 HOH A 5 -14.185 7.453 1.956 1.00 0.00 H -HETATM 15 H2 HOH A 5 -12.924 8.271 2.133 1.00 0.00 H -HETATM 16 O HOH A 6 3.788 -3.324 0.798 1.00 0.00 O -HETATM 17 H1 HOH A 6 3.963 -4.237 0.570 1.00 0.00 H -HETATM 18 H2 HOH A 6 3.233 -3.001 0.088 1.00 0.00 H -HETATM 19 O HOH A 7 7.320 -5.651 7.276 1.00 0.00 O -HETATM 20 H1 HOH A 7 8.159 -5.190 7.280 1.00 0.00 H -HETATM 21 H2 HOH A 7 7.180 -5.901 8.189 1.00 0.00 H -HETATM 22 O HOH A 8 0.324 -19.158 5.716 1.00 0.00 O -HETATM 23 H1 HOH A 8 1.168 -19.606 5.658 1.00 0.00 H -HETATM 24 H2 HOH A 8 0.095 -18.958 4.808 1.00 0.00 H -HETATM 25 O HOH A 9 -12.844 -5.983 9.893 1.00 0.00 O -HETATM 26 H1 HOH A 9 -13.327 -6.798 10.022 1.00 0.00 H -HETATM 27 H2 HOH A 9 -12.326 -5.881 10.692 1.00 0.00 H -HETATM 28 O HOH A 10 6.774 -13.136 -1.051 1.00 0.00 O -HETATM 29 H1 HOH A 10 6.158 -13.868 -1.029 1.00 0.00 H -HETATM 30 H2 HOH A 10 6.832 -12.845 -0.141 1.00 0.00 H -HETATM 31 O HOH A 11 -0.299 -0.353 -1.953 1.00 0.00 O -HETATM 32 H1 HOH A 11 -1.034 -0.849 -2.315 1.00 0.00 H -HETATM 33 H2 HOH A 11 0.013 0.181 -2.684 1.00 0.00 H -HETATM 34 O HOH A 12 -6.017 -1.678 7.363 1.00 0.00 O -HETATM 35 H1 HOH A 12 -5.605 -2.427 6.932 1.00 0.00 H -HETATM 36 H2 HOH A 12 -5.368 -1.381 8.001 1.00 0.00 H -HETATM 37 O HOH A 13 17.928 -10.905 -6.033 1.00 0.00 O -HETATM 38 H1 HOH A 13 18.811 -10.549 -6.135 1.00 0.00 H -HETATM 39 H2 HOH A 13 17.836 -11.050 -5.091 1.00 0.00 H -HETATM 40 O HOH A 14 -11.348 5.548 11.542 1.00 0.00 O -HETATM 41 H1 HOH A 14 -12.068 6.170 11.644 1.00 0.00 H -HETATM 42 H2 HOH A 14 -10.860 5.869 10.783 1.00 0.00 H -HETATM 43 O HOH A 15 6.208 1.565 -9.533 1.00 0.00 O -HETATM 44 H1 HOH A 15 6.019 1.612 -8.595 1.00 0.00 H -HETATM 45 H2 HOH A 15 5.837 0.727 -9.810 1.00 0.00 H -HETATM 46 O HOH A 16 19.374 -6.476 13.064 1.00 0.00 O -HETATM 47 H1 HOH A 16 19.079 -5.714 12.565 1.00 0.00 H -HETATM 48 H2 HOH A 16 19.970 -6.116 13.721 1.00 0.00 H -HETATM 49 O HOH A 17 -5.563 -6.785 -3.687 1.00 0.00 O -HETATM 50 H1 HOH A 17 -4.650 -7.072 -3.671 1.00 0.00 H -HETATM 51 H2 HOH A 17 -5.932 -7.200 -4.467 1.00 0.00 H -HETATM 52 O HOH A 18 -0.862 -8.711 -9.655 1.00 0.00 O -HETATM 53 H1 HOH A 18 -0.721 -9.182 -10.477 1.00 0.00 H -HETATM 54 H2 HOH A 18 -1.781 -8.444 -9.686 1.00 0.00 H -HETATM 55 O HOH A 19 -7.586 4.501 -7.216 1.00 0.00 O -HETATM 56 H1 HOH A 19 -7.865 4.137 -8.056 1.00 0.00 H -HETATM 57 H2 HOH A 19 -6.744 4.916 -7.402 1.00 0.00 H -HETATM 58 O HOH A 20 -3.286 -8.184 -3.822 1.00 0.00 O -HETATM 59 H1 HOH A 20 -2.701 -8.801 -3.384 1.00 0.00 H -HETATM 60 H2 HOH A 20 -2.838 -7.340 -3.756 1.00 0.00 H -HETATM 61 O HOH A 21 13.612 -12.078 -6.753 1.00 0.00 O -HETATM 62 H1 HOH A 21 13.583 -12.488 -7.617 1.00 0.00 H -HETATM 63 H2 HOH A 21 14.328 -12.522 -6.299 1.00 0.00 H -HETATM 64 O HOH A 22 3.348 4.099 -10.521 1.00 0.00 O -HETATM 65 H1 HOH A 22 2.827 3.600 -9.893 1.00 0.00 H -HETATM 66 H2 HOH A 22 3.440 3.516 -11.274 1.00 0.00 H -HETATM 67 O HOH A 23 -4.532 0.275 3.166 1.00 0.00 O -HETATM 68 H1 HOH A 23 -3.894 -0.222 3.679 1.00 0.00 H -HETATM 69 H2 HOH A 23 -4.714 1.051 3.696 1.00 0.00 H -HETATM 70 O HOH A 24 24.728 9.247 0.009 1.00 0.00 O -HETATM 71 H1 HOH A 24 24.885 8.436 0.493 1.00 0.00 H -HETATM 72 H2 HOH A 24 23.995 9.660 0.464 1.00 0.00 H -HETATM 73 O HOH A 25 11.537 -2.237 8.921 1.00 0.00 O -HETATM 74 H1 HOH A 25 12.168 -1.972 8.251 1.00 0.00 H -HETATM 75 H2 HOH A 25 10.804 -1.630 8.813 1.00 0.00 H -HETATM 76 O HOH A 26 6.681 -7.018 13.701 1.00 0.00 O -HETATM 77 H1 HOH A 26 6.692 -7.605 14.457 1.00 0.00 H -HETATM 78 H2 HOH A 26 7.603 -6.828 13.530 1.00 0.00 H -HETATM 79 O HOH A 27 -4.837 -14.509 3.449 1.00 0.00 O -HETATM 80 H1 HOH A 27 -4.431 -15.361 3.288 1.00 0.00 H -HETATM 81 H2 HOH A 27 -5.023 -14.506 4.388 1.00 0.00 H -HETATM 82 O HOH A 28 13.177 2.277 -5.732 1.00 0.00 O -HETATM 83 H1 HOH A 28 12.773 2.974 -6.249 1.00 0.00 H -HETATM 84 H2 HOH A 28 12.515 1.586 -5.705 1.00 0.00 H -HETATM 85 O HOH A 29 -8.428 -17.404 -9.017 1.00 0.00 O -HETATM 86 H1 HOH A 29 -8.007 -18.262 -8.979 1.00 0.00 H -HETATM 87 H2 HOH A 29 -9.348 -17.595 -9.200 1.00 0.00 H -HETATM 88 O HOH A 30 9.776 -19.230 3.011 1.00 0.00 O -HETATM 89 H1 HOH A 30 9.556 -19.576 2.146 1.00 0.00 H -HETATM 90 H2 HOH A 30 9.552 -18.301 2.961 1.00 0.00 H -HETATM 91 O HOH A 31 -2.346 -1.820 -3.285 1.00 0.00 O -HETATM 92 H1 HOH A 31 -2.549 -2.136 -2.405 1.00 0.00 H -HETATM 93 H2 HOH A 31 -1.778 -2.493 -3.657 1.00 0.00 H -HETATM 94 O HOH A 32 -0.357 -4.158 -2.714 1.00 0.00 O -HETATM 95 H1 HOH A 32 0.250 -4.511 -3.365 1.00 0.00 H -HETATM 96 H2 HOH A 32 0.198 -3.659 -2.115 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.csv b/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.csv deleted file mode 100644 index 4e0fc9b..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.csv +++ /dev/null @@ -1,3 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -1,0.001,-6418692.732524601,-6418608.70413306,70.18258709058422,0.9572847779134269,0 -2,0.002,-6418694.206991973,-6418505.993288099,157.20073205744032,0.9572847779134269,2.11 diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.dcd b/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.dcd deleted file mode 100644 index a3380bb..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.pdb b/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.pdb deleted file mode 100644 index af13fcc..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_torchani_NVT.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-10-21 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -6.208 0.205 -14.523 1.00 0.00 O -HETATM 2 H1 HOH A 1 -6.406 0.720 -15.305 1.00 0.00 H -HETATM 3 H2 HOH A 1 -5.968 -0.659 -14.858 1.00 0.00 H -HETATM 4 O HOH A 2 -6.681 8.453 1.972 1.00 0.00 O -HETATM 5 H1 HOH A 2 -6.162 7.848 2.502 1.00 0.00 H -HETATM 6 H2 HOH A 2 -6.049 8.855 1.378 1.00 0.00 H -HETATM 7 O HOH A 3 6.439 22.323 -9.040 1.00 0.00 O -HETATM 8 H1 HOH A 3 6.852 23.063 -8.594 1.00 0.00 H -HETATM 9 H2 HOH A 3 6.655 22.450 -9.964 1.00 0.00 H -HETATM 10 O HOH A 4 12.041 -16.974 -4.064 1.00 0.00 O -HETATM 11 H1 HOH A 4 12.886 -16.840 -3.634 1.00 0.00 H -HETATM 12 H2 HOH A 4 12.207 -17.659 -4.712 1.00 0.00 H -HETATM 13 O HOH A 5 6.673 1.942 -1.769 1.00 0.00 O -HETATM 14 H1 HOH A 5 7.479 2.318 -2.123 1.00 0.00 H -HETATM 15 H2 HOH A 5 6.963 1.175 -1.276 1.00 0.00 H -HETATM 16 O HOH A 6 6.576 -10.463 11.752 1.00 0.00 O -HETATM 17 H1 HOH A 6 6.417 -9.567 12.048 1.00 0.00 H -HETATM 18 H2 HOH A 6 7.333 -10.754 12.261 1.00 0.00 H -HETATM 19 O HOH A 7 10.463 -16.986 3.224 1.00 0.00 O -HETATM 20 H1 HOH A 7 9.995 -16.857 4.048 1.00 0.00 H -HETATM 21 H2 HOH A 7 11.145 -16.314 3.227 1.00 0.00 H -HETATM 22 O HOH A 8 12.744 11.434 3.472 1.00 0.00 O -HETATM 23 H1 HOH A 8 11.861 11.755 3.290 1.00 0.00 H -HETATM 24 H2 HOH A 8 13.049 11.080 2.637 1.00 0.00 H -HETATM 25 O HOH A 9 -8.004 -14.709 -16.829 1.00 0.00 O -HETATM 26 H1 HOH A 9 -7.087 -14.836 -17.073 1.00 0.00 H -HETATM 27 H2 HOH A 9 -7.969 -14.352 -15.942 1.00 0.00 H -HETATM 28 O HOH A 10 3.724 3.864 0.152 1.00 0.00 O -HETATM 29 H1 HOH A 10 3.941 4.481 0.851 1.00 0.00 H -HETATM 30 H2 HOH A 10 3.881 3.001 0.536 1.00 0.00 H -HETATM 31 O HOH A 11 -3.690 -4.445 -14.675 1.00 0.00 O -HETATM 32 H1 HOH A 11 -4.209 -5.060 -14.156 1.00 0.00 H -HETATM 33 H2 HOH A 11 -2.908 -4.940 -14.921 1.00 0.00 H -HETATM 34 O HOH A 12 12.418 5.989 5.657 1.00 0.00 O -HETATM 35 H1 HOH A 12 12.804 6.523 6.351 1.00 0.00 H -HETATM 36 H2 HOH A 12 12.058 5.228 6.113 1.00 0.00 H -HETATM 37 O HOH A 13 -9.226 7.986 -5.918 1.00 0.00 O -HETATM 38 H1 HOH A 13 -8.342 7.969 -6.286 1.00 0.00 H -HETATM 39 H2 HOH A 13 -9.180 7.407 -5.157 1.00 0.00 H -HETATM 40 O HOH A 14 6.758 6.114 11.636 1.00 0.00 O -HETATM 41 H1 HOH A 14 7.624 6.447 11.868 1.00 0.00 H -HETATM 42 H2 HOH A 14 6.717 6.193 10.683 1.00 0.00 H -HETATM 43 O HOH A 15 1.293 -1.754 -0.109 1.00 0.00 O -HETATM 44 H1 HOH A 15 1.802 -1.615 0.689 1.00 0.00 H -HETATM 45 H2 HOH A 15 1.476 -2.661 -0.355 1.00 0.00 H -HETATM 46 O HOH A 16 13.898 7.159 7.558 1.00 0.00 O -HETATM 47 H1 HOH A 16 13.947 7.799 8.268 1.00 0.00 H -HETATM 48 H2 HOH A 16 14.658 7.350 7.009 1.00 0.00 H -HETATM 49 O HOH A 17 6.643 1.041 5.074 1.00 0.00 O -HETATM 50 H1 HOH A 17 6.011 1.674 5.414 1.00 0.00 H -HETATM 51 H2 HOH A 17 6.212 0.193 5.178 1.00 0.00 H -HETATM 52 O HOH A 18 16.423 6.001 -1.153 1.00 0.00 O -HETATM 53 H1 HOH A 18 16.198 6.895 -1.412 1.00 0.00 H -HETATM 54 H2 HOH A 18 17.348 5.910 -1.382 1.00 0.00 H -HETATM 55 O HOH A 19 -0.494 13.922 -19.279 1.00 0.00 O -HETATM 56 H1 HOH A 19 -0.160 13.389 -18.558 1.00 0.00 H -HETATM 57 H2 HOH A 19 -0.631 14.788 -18.894 1.00 0.00 H -HETATM 58 O HOH A 20 -2.933 -0.684 9.099 1.00 0.00 O -HETATM 59 H1 HOH A 20 -2.988 -0.683 10.055 1.00 0.00 H -HETATM 60 H2 HOH A 20 -2.271 -1.345 8.897 1.00 0.00 H -HETATM 61 O HOH A 21 -1.620 -0.729 3.676 1.00 0.00 O -HETATM 62 H1 HOH A 21 -1.825 0.094 4.120 1.00 0.00 H -HETATM 63 H2 HOH A 21 -0.800 -1.019 4.076 1.00 0.00 H -HETATM 64 O HOH A 22 -10.421 -3.801 2.151 1.00 0.00 O -HETATM 65 H1 HOH A 22 -10.098 -2.916 2.324 1.00 0.00 H -HETATM 66 H2 HOH A 22 -9.825 -4.372 2.636 1.00 0.00 H -HETATM 67 O HOH A 23 -5.900 -9.995 8.154 1.00 0.00 O -HETATM 68 H1 HOH A 23 -4.948 -9.899 8.166 1.00 0.00 H -HETATM 69 H2 HOH A 23 -6.135 -9.935 7.228 1.00 0.00 H -HETATM 70 O HOH A 24 11.342 15.542 9.176 1.00 0.00 O -HETATM 71 H1 HOH A 24 12.191 15.126 9.324 1.00 0.00 H -HETATM 72 H2 HOH A 24 10.715 14.975 9.626 1.00 0.00 H -HETATM 73 O HOH A 25 -10.555 2.804 -11.983 1.00 0.00 O -HETATM 74 H1 HOH A 25 -9.926 2.083 -11.967 1.00 0.00 H -HETATM 75 H2 HOH A 25 -10.340 3.328 -11.212 1.00 0.00 H -HETATM 76 O HOH A 26 -5.838 0.999 0.747 1.00 0.00 O -HETATM 77 H1 HOH A 26 -4.998 1.432 0.900 1.00 0.00 H -HETATM 78 H2 HOH A 26 -5.783 0.679 -0.153 1.00 0.00 H -HETATM 79 O HOH A 27 -4.002 8.348 -5.066 1.00 0.00 O -HETATM 80 H1 HOH A 27 -3.700 7.456 -4.895 1.00 0.00 H -HETATM 81 H2 HOH A 27 -3.300 8.745 -5.580 1.00 0.00 H -HETATM 82 O HOH A 28 -11.322 3.518 -24.701 1.00 0.00 O -HETATM 83 H1 HOH A 28 -11.713 2.665 -24.888 1.00 0.00 H -HETATM 84 H2 HOH A 28 -10.765 3.365 -23.938 1.00 0.00 H -HETATM 85 O HOH A 29 -1.076 -2.639 -11.296 1.00 0.00 O -HETATM 86 H1 HOH A 29 -0.633 -3.386 -11.700 1.00 0.00 H -HETATM 87 H2 HOH A 29 -0.367 -2.106 -10.937 1.00 0.00 H -HETATM 88 O HOH A 30 1.102 0.504 -1.536 1.00 0.00 O -HETATM 89 H1 HOH A 30 1.987 0.667 -1.863 1.00 0.00 H -HETATM 90 H2 HOH A 30 1.155 -0.356 -1.118 1.00 0.00 H -HETATM 91 O HOH A 31 -5.516 -16.410 -12.694 1.00 0.00 O -HETATM 92 H1 HOH A 31 -4.762 -16.934 -12.427 1.00 0.00 H -HETATM 93 H2 HOH A 31 -5.912 -16.122 -11.871 1.00 0.00 H -HETATM 94 O HOH A 32 -5.283 5.359 -6.945 1.00 0.00 O -HETATM 95 H1 HOH A 32 -4.934 5.095 -6.094 1.00 0.00 H -HETATM 96 H2 HOH A 32 -4.568 5.845 -7.357 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.csv b/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.csv deleted file mode 100644 index 7c8c35f..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.csv +++ /dev/null @@ -1,3 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -1,0.001,-6419163.896992971,-6419111.735205879,43.56681233884692,0.9572847779134269,0 -2,0.002,-6419170.394852688,-6419054.310826031,96.9562449228997,0.9572847779134269,2.73 diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.dcd b/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.dcd deleted file mode 100644 index 08462a9..0000000 Binary files a/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.pdb b/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.pdb deleted file mode 100644 index f67da64..0000000 --- a/test_stability_protocol/waterbox_10A_ani2x_torchani_NpT.pdb +++ /dev/null @@ -1,100 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-10-21 -CRYST1 10.000 10.000 10.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 2.142 14.058 5.379 1.00 0.00 O -HETATM 2 H1 HOH A 1 1.630 13.495 5.960 1.00 0.00 H -HETATM 3 H2 HOH A 1 2.008 13.688 4.507 1.00 0.00 H -HETATM 4 O HOH A 2 3.469 3.984 2.107 1.00 0.00 O -HETATM 5 H1 HOH A 2 2.588 3.879 1.748 1.00 0.00 H -HETATM 6 H2 HOH A 2 3.612 3.193 2.627 1.00 0.00 H -HETATM 7 O HOH A 3 14.462 2.703 -4.524 1.00 0.00 O -HETATM 8 H1 HOH A 3 14.594 2.418 -3.620 1.00 0.00 H -HETATM 9 H2 HOH A 3 13.941 3.503 -4.450 1.00 0.00 H -HETATM 10 O HOH A 4 -4.098 5.223 -9.094 1.00 0.00 O -HETATM 11 H1 HOH A 4 -4.637 5.403 -8.324 1.00 0.00 H -HETATM 12 H2 HOH A 4 -4.699 4.811 -9.715 1.00 0.00 H -HETATM 13 O HOH A 5 5.494 1.921 -2.143 1.00 0.00 O -HETATM 14 H1 HOH A 5 5.274 1.177 -1.582 1.00 0.00 H -HETATM 15 H2 HOH A 5 6.410 1.780 -2.380 1.00 0.00 H -HETATM 16 O HOH A 6 3.842 -3.419 16.301 1.00 0.00 O -HETATM 17 H1 HOH A 6 4.184 -3.462 15.409 1.00 0.00 H -HETATM 18 H2 HOH A 6 3.648 -2.492 16.440 1.00 0.00 H -HETATM 19 O HOH A 7 -12.126 8.718 18.339 1.00 0.00 O -HETATM 20 H1 HOH A 7 -12.364 7.837 18.050 1.00 0.00 H -HETATM 21 H2 HOH A 7 -12.961 9.138 18.542 1.00 0.00 H -HETATM 22 O HOH A 8 -1.079 -0.405 4.450 1.00 0.00 O -HETATM 23 H1 HOH A 8 -1.935 -0.021 4.640 1.00 0.00 H -HETATM 24 H2 HOH A 8 -1.275 -1.176 3.917 1.00 0.00 H -HETATM 25 O HOH A 9 -6.671 9.558 6.186 1.00 0.00 O -HETATM 26 H1 HOH A 9 -5.974 9.301 5.583 1.00 0.00 H -HETATM 27 H2 HOH A 9 -7.370 9.886 5.620 1.00 0.00 H -HETATM 28 O HOH A 10 1.396 -3.483 12.699 1.00 0.00 O -HETATM 29 H1 HOH A 10 1.676 -4.392 12.808 1.00 0.00 H -HETATM 30 H2 HOH A 10 1.796 -3.205 11.875 1.00 0.00 H -HETATM 31 O HOH A 11 1.942 11.605 -2.711 1.00 0.00 O -HETATM 32 H1 HOH A 11 2.701 11.096 -2.995 1.00 0.00 H -HETATM 33 H2 HOH A 11 1.258 10.952 -2.561 1.00 0.00 H -HETATM 34 O HOH A 12 6.590 0.957 15.266 1.00 0.00 O -HETATM 35 H1 HOH A 12 6.634 1.873 15.541 1.00 0.00 H -HETATM 36 H2 HOH A 12 5.961 0.953 14.544 1.00 0.00 H -HETATM 37 O HOH A 13 0.075 -3.981 -4.666 1.00 0.00 O -HETATM 38 H1 HOH A 13 0.554 -3.612 -5.408 1.00 0.00 H -HETATM 39 H2 HOH A 13 0.633 -4.690 -4.349 1.00 0.00 H -HETATM 40 O HOH A 14 -14.706 8.057 -5.485 1.00 0.00 O -HETATM 41 H1 HOH A 14 -13.945 7.723 -5.009 1.00 0.00 H -HETATM 42 H2 HOH A 14 -14.345 8.404 -6.301 1.00 0.00 H -HETATM 43 O HOH A 15 4.056 1.506 13.148 1.00 0.00 O -HETATM 44 H1 HOH A 15 3.320 0.912 13.293 1.00 0.00 H -HETATM 45 H2 HOH A 15 4.129 2.001 13.964 1.00 0.00 H -HETATM 46 O HOH A 16 -2.230 4.128 -6.870 1.00 0.00 O -HETATM 47 H1 HOH A 16 -2.069 5.026 -6.581 1.00 0.00 H -HETATM 48 H2 HOH A 16 -2.910 4.210 -7.539 1.00 0.00 H -HETATM 49 O HOH A 17 -3.863 -0.414 2.174 1.00 0.00 O -HETATM 50 H1 HOH A 17 -4.033 -0.854 1.341 1.00 0.00 H -HETATM 51 H2 HOH A 17 -4.385 0.387 2.133 1.00 0.00 H -HETATM 52 O HOH A 18 4.041 4.135 9.047 1.00 0.00 O -HETATM 53 H1 HOH A 18 3.159 3.845 8.813 1.00 0.00 H -HETATM 54 H2 HOH A 18 4.622 3.503 8.624 1.00 0.00 H -HETATM 55 O HOH A 19 -12.436 -3.161 -4.376 1.00 0.00 O -HETATM 56 H1 HOH A 19 -12.569 -3.841 -3.715 1.00 0.00 H -HETATM 57 H2 HOH A 19 -11.758 -3.514 -4.951 1.00 0.00 H -HETATM 58 O HOH A 20 2.642 -3.215 10.421 1.00 0.00 O -HETATM 59 H1 HOH A 20 3.256 -3.892 10.137 1.00 0.00 H -HETATM 60 H2 HOH A 20 2.077 -3.070 9.663 1.00 0.00 H -HETATM 61 O HOH A 21 0.038 4.110 -2.030 1.00 0.00 O -HETATM 62 H1 HOH A 21 -0.639 3.965 -1.369 1.00 0.00 H -HETATM 63 H2 HOH A 21 0.616 4.767 -1.643 1.00 0.00 H -HETATM 64 O HOH A 22 -13.340 -3.717 -11.657 1.00 0.00 O -HETATM 65 H1 HOH A 22 -14.282 -3.594 -11.772 1.00 0.00 H -HETATM 66 H2 HOH A 22 -13.264 -4.300 -10.902 1.00 0.00 H -HETATM 67 O HOH A 23 -9.199 3.517 2.735 1.00 0.00 O -HETATM 68 H1 HOH A 23 -10.041 3.718 3.144 1.00 0.00 H -HETATM 69 H2 HOH A 23 -9.326 2.656 2.335 1.00 0.00 H -HETATM 70 O HOH A 24 0.582 11.887 0.300 1.00 0.00 O -HETATM 71 H1 HOH A 24 -0.272 11.496 0.484 1.00 0.00 H -HETATM 72 H2 HOH A 24 0.618 11.945 -0.654 1.00 0.00 H -HETATM 73 O HOH A 25 -4.871 -1.016 -1.233 1.00 0.00 O -HETATM 74 H1 HOH A 25 -5.483 -0.471 -0.739 1.00 0.00 H -HETATM 75 H2 HOH A 25 -5.184 -0.970 -2.136 1.00 0.00 H -HETATM 76 O HOH A 26 8.828 -2.886 2.632 1.00 0.00 O -HETATM 77 H1 HOH A 26 8.527 -3.300 1.824 1.00 0.00 H -HETATM 78 H2 HOH A 26 9.758 -3.110 2.684 1.00 0.00 H -HETATM 79 O HOH A 27 -18.167 -0.143 -6.178 1.00 0.00 O -HETATM 80 H1 HOH A 27 -19.115 -0.220 -6.072 1.00 0.00 H -HETATM 81 H2 HOH A 27 -17.936 -0.844 -6.788 1.00 0.00 H -HETATM 82 O HOH A 28 -1.285 9.969 11.250 1.00 0.00 O -HETATM 83 H1 HOH A 28 -1.014 9.087 10.994 1.00 0.00 H -HETATM 84 H2 HOH A 28 -1.941 9.830 11.933 1.00 0.00 H -HETATM 85 O HOH A 29 -1.785 -7.849 -2.737 1.00 0.00 O -HETATM 86 H1 HOH A 29 -1.352 -7.031 -2.980 1.00 0.00 H -HETATM 87 H2 HOH A 29 -1.095 -8.511 -2.789 1.00 0.00 H -HETATM 88 O HOH A 30 1.657 -3.566 7.813 1.00 0.00 O -HETATM 89 H1 HOH A 30 2.407 -3.821 7.276 1.00 0.00 H -HETATM 90 H2 HOH A 30 1.155 -2.970 7.257 1.00 0.00 H -HETATM 91 O HOH A 31 3.591 -9.357 0.434 1.00 0.00 O -HETATM 92 H1 HOH A 31 2.699 -9.137 0.164 1.00 0.00 H -HETATM 93 H2 HOH A 31 3.719 -8.877 1.253 1.00 0.00 H -HETATM 94 O HOH A 32 -0.158 9.835 -2.890 1.00 0.00 O -HETATM 95 H1 HOH A 32 -0.854 9.413 -2.385 1.00 0.00 H -HETATM 96 H2 HOH A 32 -0.352 9.610 -3.800 1.00 0.00 H -TER 97 HOH A 32 -END diff --git a/test_stability_protocol/waterbox_20A_ani2x_torchani_NpT.csv b/test_stability_protocol/waterbox_20A_ani2x_torchani_NpT.csv deleted file mode 100644 index e69de29..0000000 diff --git a/test_stability_protocol/waterbox_20A_ani2x_torchani_NpT.dcd b/test_stability_protocol/waterbox_20A_ani2x_torchani_NpT.dcd deleted file mode 100644 index e69de29..0000000 diff --git a/test_stability_protocol/waterbox_20A_ani2x_torchani_NpT.pdb b/test_stability_protocol/waterbox_20A_ani2x_torchani_NpT.pdb deleted file mode 100644 index 69b26f1..0000000 --- a/test_stability_protocol/waterbox_20A_ani2x_torchani_NpT.pdb +++ /dev/null @@ -1,778 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-09-25 -CRYST1 20.000 20.000 20.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 -2.424 8.695 5.146 1.00 0.00 O -HETATM 2 H1 HOH A 1 -2.871 8.696 5.992 1.00 0.00 H -HETATM 3 H2 HOH A 1 -1.891 9.490 5.154 1.00 0.00 H -HETATM 4 O HOH A 2 -6.468 4.884 -0.125 1.00 0.00 O -HETATM 5 H1 HOH A 2 -5.954 5.492 -0.656 1.00 0.00 H -HETATM 6 H2 HOH A 2 -6.755 4.210 -0.742 1.00 0.00 H -HETATM 7 O HOH A 3 -13.939 -16.325 -7.817 1.00 0.00 O -HETATM 8 H1 HOH A 3 -13.694 -16.840 -7.048 1.00 0.00 H -HETATM 9 H2 HOH A 3 -14.586 -16.865 -8.271 1.00 0.00 H -HETATM 10 O HOH A 4 0.205 13.388 -4.482 1.00 0.00 O -HETATM 11 H1 HOH A 4 0.117 12.472 -4.746 1.00 0.00 H -HETATM 12 H2 HOH A 4 -0.546 13.826 -4.883 1.00 0.00 H -HETATM 13 O HOH A 5 -8.543 11.053 -8.121 1.00 0.00 O -HETATM 14 H1 HOH A 5 -9.343 10.609 -8.403 1.00 0.00 H -HETATM 15 H2 HOH A 5 -8.627 11.117 -7.169 1.00 0.00 H -HETATM 16 O HOH A 6 9.022 10.715 2.261 1.00 0.00 O -HETATM 17 H1 HOH A 6 9.313 11.068 1.420 1.00 0.00 H -HETATM 18 H2 HOH A 6 8.645 9.862 2.045 1.00 0.00 H -HETATM 19 O HOH A 7 17.488 10.639 14.620 1.00 0.00 O -HETATM 20 H1 HOH A 7 18.393 10.346 14.511 1.00 0.00 H -HETATM 21 H2 HOH A 7 17.559 11.458 15.111 1.00 0.00 H -HETATM 22 O HOH A 8 12.014 -3.860 -13.775 1.00 0.00 O -HETATM 23 H1 HOH A 8 11.642 -3.150 -14.297 1.00 0.00 H -HETATM 24 H2 HOH A 8 12.805 -3.485 -13.388 1.00 0.00 H -HETATM 25 O HOH A 9 10.182 15.755 10.022 1.00 0.00 O -HETATM 26 H1 HOH A 9 10.472 16.660 10.136 1.00 0.00 H -HETATM 27 H2 HOH A 9 10.841 15.233 10.478 1.00 0.00 H -HETATM 28 O HOH A 10 -10.800 1.223 -11.475 1.00 0.00 O -HETATM 29 H1 HOH A 10 -10.829 2.056 -11.005 1.00 0.00 H -HETATM 30 H2 HOH A 10 -10.277 0.649 -10.915 1.00 0.00 H -HETATM 31 O HOH A 11 4.338 13.263 -5.980 1.00 0.00 O -HETATM 32 H1 HOH A 11 4.939 13.778 -5.442 1.00 0.00 H -HETATM 33 H2 HOH A 11 4.061 12.545 -5.412 1.00 0.00 H -HETATM 34 O HOH A 12 1.998 5.483 7.090 1.00 0.00 O -HETATM 35 H1 HOH A 12 1.217 5.740 6.600 1.00 0.00 H -HETATM 36 H2 HOH A 12 2.394 6.311 7.361 1.00 0.00 H -HETATM 37 O HOH A 13 13.833 11.204 -9.329 1.00 0.00 O -HETATM 38 H1 HOH A 13 14.263 10.990 -8.501 1.00 0.00 H -HETATM 39 H2 HOH A 13 12.905 11.270 -9.107 1.00 0.00 H -HETATM 40 O HOH A 14 -13.637 -10.750 -11.391 1.00 0.00 O -HETATM 41 H1 HOH A 14 -13.968 -10.451 -10.544 1.00 0.00 H -HETATM 42 H2 HOH A 14 -13.276 -11.619 -11.214 1.00 0.00 H -HETATM 43 O HOH A 15 -18.142 -15.812 3.955 1.00 0.00 O -HETATM 44 H1 HOH A 15 -17.295 -15.448 3.697 1.00 0.00 H -HETATM 45 H2 HOH A 15 -18.663 -15.050 4.208 1.00 0.00 H -HETATM 46 O HOH A 16 10.432 -0.395 -0.812 1.00 0.00 O -HETATM 47 H1 HOH A 16 11.174 -0.558 -0.230 1.00 0.00 H -HETATM 48 H2 HOH A 16 10.497 0.535 -1.028 1.00 0.00 H -HETATM 49 O HOH A 17 -1.041 -13.701 -0.737 1.00 0.00 O -HETATM 50 H1 HOH A 17 -1.090 -14.366 -1.424 1.00 0.00 H -HETATM 51 H2 HOH A 17 -1.030 -14.201 0.080 1.00 0.00 H -HETATM 52 O HOH A 18 11.564 3.377 -11.760 1.00 0.00 O -HETATM 53 H1 HOH A 18 11.141 4.214 -11.954 1.00 0.00 H -HETATM 54 H2 HOH A 18 11.240 2.781 -12.435 1.00 0.00 H -HETATM 55 O HOH A 19 -0.728 -9.347 -8.410 1.00 0.00 O -HETATM 56 H1 HOH A 19 -1.325 -8.715 -8.011 1.00 0.00 H -HETATM 57 H2 HOH A 19 -1.280 -9.854 -9.006 1.00 0.00 H -HETATM 58 O HOH A 20 -12.747 9.653 -0.782 1.00 0.00 O -HETATM 59 H1 HOH A 20 -12.014 9.120 -1.091 1.00 0.00 H -HETATM 60 H2 HOH A 20 -13.282 9.801 -1.562 1.00 0.00 H -HETATM 61 O HOH A 21 -10.268 2.186 12.131 1.00 0.00 O -HETATM 62 H1 HOH A 21 -10.467 1.257 12.014 1.00 0.00 H -HETATM 63 H2 HOH A 21 -10.831 2.463 12.854 1.00 0.00 H -HETATM 64 O HOH A 22 -2.294 12.657 -3.104 1.00 0.00 O -HETATM 65 H1 HOH A 22 -2.190 13.555 -2.788 1.00 0.00 H -HETATM 66 H2 HOH A 22 -2.510 12.150 -2.321 1.00 0.00 H -HETATM 67 O HOH A 23 5.002 -0.801 2.603 1.00 0.00 O -HETATM 68 H1 HOH A 23 4.754 -0.714 1.682 1.00 0.00 H -HETATM 69 H2 HOH A 23 4.528 -0.097 3.046 1.00 0.00 H -HETATM 70 O HOH A 24 -5.966 5.140 9.748 1.00 0.00 O -HETATM 71 H1 HOH A 24 -6.451 4.839 8.979 1.00 0.00 H -HETATM 72 H2 HOH A 24 -6.358 5.987 9.963 1.00 0.00 H -HETATM 73 O HOH A 25 -13.089 8.649 -18.283 1.00 0.00 O -HETATM 74 H1 HOH A 25 -13.720 7.928 -18.263 1.00 0.00 H -HETATM 75 H2 HOH A 25 -13.287 9.118 -19.094 1.00 0.00 H -HETATM 76 O HOH A 26 16.521 -7.247 2.762 1.00 0.00 O -HETATM 77 H1 HOH A 26 15.814 -7.160 2.122 1.00 0.00 H -HETATM 78 H2 HOH A 26 16.273 -6.658 3.475 1.00 0.00 H -HETATM 79 O HOH A 27 -4.198 -11.551 -3.722 1.00 0.00 O -HETATM 80 H1 HOH A 27 -4.351 -12.268 -4.338 1.00 0.00 H -HETATM 81 H2 HOH A 27 -3.648 -10.934 -4.205 1.00 0.00 H -HETATM 82 O HOH A 28 5.504 15.377 6.104 1.00 0.00 O -HETATM 83 H1 HOH A 28 5.611 16.006 6.817 1.00 0.00 H -HETATM 84 H2 HOH A 28 6.365 14.968 6.013 1.00 0.00 H -HETATM 85 O HOH A 29 -7.401 -16.595 -2.243 1.00 0.00 O -HETATM 86 H1 HOH A 29 -8.199 -17.091 -2.060 1.00 0.00 H -HETATM 87 H2 HOH A 29 -6.819 -17.224 -2.670 1.00 0.00 H -HETATM 88 O HOH A 30 7.318 18.813 4.954 1.00 0.00 O -HETATM 89 H1 HOH A 30 7.132 18.950 4.025 1.00 0.00 H -HETATM 90 H2 HOH A 30 8.037 18.181 4.964 1.00 0.00 H -HETATM 91 O HOH A 31 -1.713 -15.176 1.698 1.00 0.00 O -HETATM 92 H1 HOH A 31 -2.631 -14.907 1.672 1.00 0.00 H -HETATM 93 H2 HOH A 31 -1.346 -14.704 2.445 1.00 0.00 H -HETATM 94 O HOH A 32 12.007 15.374 -20.013 1.00 0.00 O -HETATM 95 H1 HOH A 32 11.072 15.229 -19.866 1.00 0.00 H -HETATM 96 H2 HOH A 32 12.427 14.574 -19.698 1.00 0.00 H -HETATM 97 O HOH A 33 19.893 -17.264 -8.980 1.00 0.00 O -HETATM 98 H1 HOH A 33 20.804 -17.200 -8.691 1.00 0.00 H -HETATM 99 H2 HOH A 33 19.903 -16.936 -9.879 1.00 0.00 H -HETATM 100 O HOH A 34 -7.330 -6.595 6.030 1.00 0.00 O -HETATM 101 H1 HOH A 34 -7.394 -5.684 6.318 1.00 0.00 H -HETATM 102 H2 HOH A 34 -7.449 -7.108 6.830 1.00 0.00 H -HETATM 103 O HOH A 35 -1.256 13.437 4.051 1.00 0.00 O -HETATM 104 H1 HOH A 35 -0.794 12.732 4.505 1.00 0.00 H -HETATM 105 H2 HOH A 35 -2.155 13.120 3.967 1.00 0.00 H -HETATM 106 O HOH A 36 -3.300 -3.758 7.428 1.00 0.00 O -HETATM 107 H1 HOH A 36 -2.836 -3.598 6.606 1.00 0.00 H -HETATM 108 H2 HOH A 36 -4.213 -3.545 7.233 1.00 0.00 H -HETATM 109 O HOH A 37 -1.719 -13.172 -6.026 1.00 0.00 O -HETATM 110 H1 HOH A 37 -0.914 -12.776 -5.692 1.00 0.00 H -HETATM 111 H2 HOH A 37 -1.474 -13.532 -6.878 1.00 0.00 H -HETATM 112 O HOH A 38 -4.759 -2.512 1.092 1.00 0.00 O -HETATM 113 H1 HOH A 38 -5.390 -1.902 0.710 1.00 0.00 H -HETATM 114 H2 HOH A 38 -4.558 -2.142 1.951 1.00 0.00 H -HETATM 115 O HOH A 39 1.220 -1.091 6.038 1.00 0.00 O -HETATM 116 H1 HOH A 39 1.831 -0.701 6.664 1.00 0.00 H -HETATM 117 H2 HOH A 39 1.647 -1.902 5.760 1.00 0.00 H -HETATM 118 O HOH A 40 7.151 -12.150 4.271 1.00 0.00 O -HETATM 119 H1 HOH A 40 7.000 -11.948 3.348 1.00 0.00 H -HETATM 120 H2 HOH A 40 6.574 -11.552 4.746 1.00 0.00 H -HETATM 121 O HOH A 41 -12.356 -22.434 -5.689 1.00 0.00 O -HETATM 122 H1 HOH A 41 -13.052 -21.974 -6.158 1.00 0.00 H -HETATM 123 H2 HOH A 41 -12.502 -22.216 -4.768 1.00 0.00 H -HETATM 124 O HOH A 42 7.307 0.714 1.849 1.00 0.00 O -HETATM 125 H1 HOH A 42 6.449 0.379 2.110 1.00 0.00 H -HETATM 126 H2 HOH A 42 7.812 -0.068 1.626 1.00 0.00 H -HETATM 127 O HOH A 43 13.337 1.597 -27.104 1.00 0.00 O -HETATM 128 H1 HOH A 43 12.851 1.850 -27.889 1.00 0.00 H -HETATM 129 H2 HOH A 43 14.172 1.266 -27.435 1.00 0.00 H -HETATM 130 O HOH A 44 -7.977 -14.159 1.864 1.00 0.00 O -HETATM 131 H1 HOH A 44 -7.216 -14.276 1.296 1.00 0.00 H -HETATM 132 H2 HOH A 44 -8.215 -13.238 1.760 1.00 0.00 H -HETATM 133 O HOH A 45 7.406 15.070 -10.060 1.00 0.00 O -HETATM 134 H1 HOH A 45 7.033 15.779 -10.582 1.00 0.00 H -HETATM 135 H2 HOH A 45 8.352 15.205 -10.111 1.00 0.00 H -HETATM 136 O HOH A 46 -2.431 -3.212 -5.462 1.00 0.00 O -HETATM 137 H1 HOH A 46 -1.603 -2.866 -5.129 1.00 0.00 H -HETATM 138 H2 HOH A 46 -2.339 -4.163 -5.393 1.00 0.00 H -HETATM 139 O HOH A 47 -2.165 -10.451 -10.522 1.00 0.00 O -HETATM 140 H1 HOH A 47 -1.616 -10.576 -11.296 1.00 0.00 H -HETATM 141 H2 HOH A 47 -2.790 -9.773 -10.778 1.00 0.00 H -HETATM 142 O HOH A 48 4.315 5.491 4.373 1.00 0.00 O -HETATM 143 H1 HOH A 48 5.050 4.973 4.702 1.00 0.00 H -HETATM 144 H2 HOH A 48 3.892 5.834 5.159 1.00 0.00 H -HETATM 145 O HOH A 49 -18.101 4.829 -7.759 1.00 0.00 O -HETATM 146 H1 HOH A 49 -17.460 4.288 -8.219 1.00 0.00 H -HETATM 147 H2 HOH A 49 -18.490 5.375 -8.443 1.00 0.00 H -HETATM 148 O HOH A 50 -5.607 9.708 8.340 1.00 0.00 O -HETATM 149 H1 HOH A 50 -6.314 9.082 8.496 1.00 0.00 H -HETATM 150 H2 HOH A 50 -5.533 10.197 9.160 1.00 0.00 H -HETATM 151 O HOH A 51 -0.552 16.904 1.686 1.00 0.00 O -HETATM 152 H1 HOH A 51 -0.462 16.161 1.089 1.00 0.00 H -HETATM 153 H2 HOH A 51 -0.055 16.650 2.463 1.00 0.00 H -HETATM 154 O HOH A 52 -9.912 7.175 4.203 1.00 0.00 O -HETATM 155 H1 HOH A 52 -10.619 7.710 4.564 1.00 0.00 H -HETATM 156 H2 HOH A 52 -9.513 7.727 3.530 1.00 0.00 H -HETATM 157 O HOH A 53 -6.026 1.639 16.241 1.00 0.00 O -HETATM 158 H1 HOH A 53 -5.278 1.861 15.686 1.00 0.00 H -HETATM 159 H2 HOH A 53 -6.616 1.152 15.665 1.00 0.00 H -HETATM 160 O HOH A 54 -4.459 -1.590 -4.427 1.00 0.00 O -HETATM 161 H1 HOH A 54 -3.884 -2.294 -4.729 1.00 0.00 H -HETATM 162 H2 HOH A 54 -3.863 -0.885 -4.176 1.00 0.00 H -HETATM 163 O HOH A 55 4.259 -2.633 -9.056 1.00 0.00 O -HETATM 164 H1 HOH A 55 3.413 -2.197 -8.960 1.00 0.00 H -HETATM 165 H2 HOH A 55 4.076 -3.556 -8.878 1.00 0.00 H -HETATM 166 O HOH A 56 -13.975 9.756 5.884 1.00 0.00 O -HETATM 167 H1 HOH A 56 -13.807 9.594 6.812 1.00 0.00 H -HETATM 168 H2 HOH A 56 -14.923 9.871 5.828 1.00 0.00 H -HETATM 169 O HOH A 57 12.124 2.714 10.741 1.00 0.00 O -HETATM 170 H1 HOH A 57 11.939 2.848 9.811 1.00 0.00 H -HETATM 171 H2 HOH A 57 11.267 2.546 11.134 1.00 0.00 H -HETATM 172 O HOH A 58 0.710 14.764 0.180 1.00 0.00 O -HETATM 173 H1 HOH A 58 0.125 14.010 0.105 1.00 0.00 H -HETATM 174 H2 HOH A 58 1.306 14.536 0.894 1.00 0.00 H -HETATM 175 O HOH A 59 1.452 2.940 -1.120 1.00 0.00 O -HETATM 176 H1 HOH A 59 1.364 2.818 -0.175 1.00 0.00 H -HETATM 177 H2 HOH A 59 2.309 3.352 -1.230 1.00 0.00 H -HETATM 178 O HOH A 60 9.377 6.912 -4.603 1.00 0.00 O -HETATM 179 H1 HOH A 60 9.500 7.786 -4.973 1.00 0.00 H -HETATM 180 H2 HOH A 60 10.264 6.565 -4.508 1.00 0.00 H -HETATM 181 O HOH A 61 -8.634 -15.155 -15.262 1.00 0.00 O -HETATM 182 H1 HOH A 61 -9.208 -14.469 -15.603 1.00 0.00 H -HETATM 183 H2 HOH A 61 -7.754 -14.886 -15.526 1.00 0.00 H -HETATM 184 O HOH A 62 -1.768 -1.398 -9.110 1.00 0.00 O -HETATM 185 H1 HOH A 62 -1.559 -2.052 -9.778 1.00 0.00 H -HETATM 186 H2 HOH A 62 -2.342 -1.858 -8.497 1.00 0.00 H -HETATM 187 O HOH A 63 6.456 -9.794 -3.229 1.00 0.00 O -HETATM 188 H1 HOH A 63 6.717 -9.850 -4.148 1.00 0.00 H -HETATM 189 H2 HOH A 63 5.862 -9.044 -3.195 1.00 0.00 H -HETATM 190 O HOH A 64 -5.730 17.544 6.654 1.00 0.00 O -HETATM 191 H1 HOH A 64 -6.109 17.961 5.880 1.00 0.00 H -HETATM 192 H2 HOH A 64 -5.341 18.265 7.149 1.00 0.00 H -HETATM 193 O HOH A 65 7.901 3.135 -9.841 1.00 0.00 O -HETATM 194 H1 HOH A 65 8.839 3.301 -9.746 1.00 0.00 H -HETATM 195 H2 HOH A 65 7.522 3.419 -9.009 1.00 0.00 H -HETATM 196 O HOH A 66 -2.483 0.177 15.679 1.00 0.00 O -HETATM 197 H1 HOH A 66 -1.859 0.155 14.953 1.00 0.00 H -HETATM 198 H2 HOH A 66 -2.971 0.990 15.552 1.00 0.00 H -HETATM 199 O HOH A 67 1.248 -7.894 2.057 1.00 0.00 O -HETATM 200 H1 HOH A 67 1.813 -7.140 1.889 1.00 0.00 H -HETATM 201 H2 HOH A 67 0.371 -7.596 1.814 1.00 0.00 H -HETATM 202 O HOH A 68 -2.629 14.147 -5.253 1.00 0.00 O -HETATM 203 H1 HOH A 68 -3.364 13.912 -5.818 1.00 0.00 H -HETATM 204 H2 HOH A 68 -2.784 13.662 -4.443 1.00 0.00 H -HETATM 205 O HOH A 69 -7.893 -0.079 14.691 1.00 0.00 O -HETATM 206 H1 HOH A 69 -8.758 0.253 14.933 1.00 0.00 H -HETATM 207 H2 HOH A 69 -7.597 0.506 13.994 1.00 0.00 H -HETATM 208 O HOH A 70 -11.010 -19.539 -5.122 1.00 0.00 O -HETATM 209 H1 HOH A 70 -11.005 -20.138 -4.376 1.00 0.00 H -HETATM 210 H2 HOH A 70 -11.716 -18.921 -4.929 1.00 0.00 H -HETATM 211 O HOH A 71 -13.639 3.994 5.557 1.00 0.00 O -HETATM 212 H1 HOH A 71 -13.671 3.303 6.219 1.00 0.00 H -HETATM 213 H2 HOH A 71 -13.063 3.648 4.876 1.00 0.00 H -HETATM 214 O HOH A 72 9.232 -5.749 19.975 1.00 0.00 O -HETATM 215 H1 HOH A 72 8.651 -5.569 20.714 1.00 0.00 H -HETATM 216 H2 HOH A 72 9.456 -6.675 20.065 1.00 0.00 H -HETATM 217 O HOH A 73 -3.839 -6.345 -10.595 1.00 0.00 O -HETATM 218 H1 HOH A 73 -3.129 -6.499 -11.219 1.00 0.00 H -HETATM 219 H2 HOH A 73 -4.571 -6.861 -10.932 1.00 0.00 H -HETATM 220 O HOH A 74 -9.363 19.163 9.886 1.00 0.00 O -HETATM 221 H1 HOH A 74 -8.419 19.053 10.004 1.00 0.00 H -HETATM 222 H2 HOH A 74 -9.723 19.103 10.771 1.00 0.00 H -HETATM 223 O HOH A 75 -1.436 -22.382 -14.518 1.00 0.00 O -HETATM 224 H1 HOH A 75 -1.260 -22.898 -15.305 1.00 0.00 H -HETATM 225 H2 HOH A 75 -0.573 -22.086 -14.228 1.00 0.00 H -HETATM 226 O HOH A 76 15.805 8.090 -6.823 1.00 0.00 O -HETATM 227 H1 HOH A 76 15.254 7.428 -6.405 1.00 0.00 H -HETATM 228 H2 HOH A 76 16.676 7.695 -6.849 1.00 0.00 H -HETATM 229 O HOH A 77 7.648 13.504 -14.113 1.00 0.00 O -HETATM 230 H1 HOH A 77 8.211 13.774 -13.387 1.00 0.00 H -HETATM 231 H2 HOH A 77 7.919 12.607 -14.307 1.00 0.00 H -HETATM 232 O HOH A 78 -5.835 5.678 -16.161 1.00 0.00 O -HETATM 233 H1 HOH A 78 -5.945 6.170 -15.347 1.00 0.00 H -HETATM 234 H2 HOH A 78 -5.340 4.899 -15.906 1.00 0.00 H -HETATM 235 O HOH A 79 7.647 4.708 -4.618 1.00 0.00 O -HETATM 236 H1 HOH A 79 8.149 5.492 -4.842 1.00 0.00 H -HETATM 237 H2 HOH A 79 7.058 4.992 -3.919 1.00 0.00 H -HETATM 238 O HOH A 80 -1.781 2.499 7.163 1.00 0.00 O -HETATM 239 H1 HOH A 80 -2.112 3.293 6.742 1.00 0.00 H -HETATM 240 H2 HOH A 80 -0.998 2.270 6.661 1.00 0.00 H -HETATM 241 O HOH A 81 8.684 -15.758 -1.847 1.00 0.00 O -HETATM 242 H1 HOH A 81 8.220 -14.930 -1.970 1.00 0.00 H -HETATM 243 H2 HOH A 81 8.930 -16.028 -2.732 1.00 0.00 H -HETATM 244 O HOH A 82 5.418 9.861 -8.471 1.00 0.00 O -HETATM 245 H1 HOH A 82 4.807 9.124 -8.463 1.00 0.00 H -HETATM 246 H2 HOH A 82 4.867 10.628 -8.628 1.00 0.00 H -HETATM 247 O HOH A 83 9.495 -7.819 -6.032 1.00 0.00 O -HETATM 248 H1 HOH A 83 9.592 -7.235 -5.279 1.00 0.00 H -HETATM 249 H2 HOH A 83 8.913 -7.348 -6.628 1.00 0.00 H -HETATM 250 O HOH A 84 -7.806 -5.736 -8.943 1.00 0.00 O -HETATM 251 H1 HOH A 84 -7.219 -4.996 -8.785 1.00 0.00 H -HETATM 252 H2 HOH A 84 -7.716 -6.284 -8.164 1.00 0.00 H -HETATM 253 O HOH A 85 -9.598 -13.975 -12.712 1.00 0.00 O -HETATM 254 H1 HOH A 85 -10.377 -13.911 -13.264 1.00 0.00 H -HETATM 255 H2 HOH A 85 -8.884 -13.659 -13.267 1.00 0.00 H -HETATM 256 O HOH A 86 22.132 20.851 9.777 1.00 0.00 O -HETATM 257 H1 HOH A 86 22.405 20.532 8.917 1.00 0.00 H -HETATM 258 H2 HOH A 86 21.753 20.085 10.208 1.00 0.00 H -HETATM 259 O HOH A 87 17.444 5.118 -13.491 1.00 0.00 O -HETATM 260 H1 HOH A 87 17.515 6.054 -13.303 1.00 0.00 H -HETATM 261 H2 HOH A 87 16.518 4.915 -13.358 1.00 0.00 H -HETATM 262 O HOH A 88 -3.462 -12.216 7.581 1.00 0.00 O -HETATM 263 H1 HOH A 88 -3.778 -11.541 8.181 1.00 0.00 H -HETATM 264 H2 HOH A 88 -3.440 -13.015 8.108 1.00 0.00 H -HETATM 265 O HOH A 89 -11.327 -21.697 -12.051 1.00 0.00 O -HETATM 266 H1 HOH A 89 -12.148 -21.561 -11.579 1.00 0.00 H -HETATM 267 H2 HOH A 89 -10.650 -21.643 -11.377 1.00 0.00 H -HETATM 268 O HOH A 90 -6.082 4.486 -6.935 1.00 0.00 O -HETATM 269 H1 HOH A 90 -6.159 4.564 -7.886 1.00 0.00 H -HETATM 270 H2 HOH A 90 -6.039 3.544 -6.774 1.00 0.00 H -HETATM 271 O HOH A 91 4.376 5.059 9.260 1.00 0.00 O -HETATM 272 H1 HOH A 91 3.736 5.603 8.801 1.00 0.00 H -HETATM 273 H2 HOH A 91 5.220 5.467 9.065 1.00 0.00 H -HETATM 274 O HOH A 92 -1.847 -12.927 3.182 1.00 0.00 O -HETATM 275 H1 HOH A 92 -2.658 -13.227 2.770 1.00 0.00 H -HETATM 276 H2 HOH A 92 -2.130 -12.524 4.002 1.00 0.00 H -HETATM 277 O HOH A 93 3.850 14.129 -11.285 1.00 0.00 O -HETATM 278 H1 HOH A 93 4.616 14.296 -11.834 1.00 0.00 H -HETATM 279 H2 HOH A 93 4.119 13.413 -10.710 1.00 0.00 H -HETATM 280 O HOH A 94 0.088 10.574 -3.976 1.00 0.00 O -HETATM 281 H1 HOH A 94 -0.054 10.869 -3.077 1.00 0.00 H -HETATM 282 H2 HOH A 94 1.039 10.579 -4.083 1.00 0.00 H -HETATM 283 O HOH A 95 -8.562 13.503 -16.386 1.00 0.00 O -HETATM 284 H1 HOH A 95 -8.290 13.571 -15.471 1.00 0.00 H -HETATM 285 H2 HOH A 95 -8.182 14.273 -16.807 1.00 0.00 H -HETATM 286 O HOH A 96 5.867 -2.941 8.521 1.00 0.00 O -HETATM 287 H1 HOH A 96 5.322 -2.653 9.253 1.00 0.00 H -HETATM 288 H2 HOH A 96 5.733 -2.275 7.846 1.00 0.00 H -HETATM 289 O HOH A 97 6.861 -5.201 -4.517 1.00 0.00 O -HETATM 290 H1 HOH A 97 7.197 -5.034 -5.398 1.00 0.00 H -HETATM 291 H2 HOH A 97 6.276 -4.464 -4.340 1.00 0.00 H -HETATM 292 O HOH A 98 14.710 2.302 9.360 1.00 0.00 O -HETATM 293 H1 HOH A 98 14.176 2.631 10.083 1.00 0.00 H -HETATM 294 H2 HOH A 98 15.576 2.165 9.744 1.00 0.00 H -HETATM 295 O HOH A 99 -9.917 -11.614 -19.949 1.00 0.00 O -HETATM 296 H1 HOH A 99 -9.459 -11.614 -19.108 1.00 0.00 H -HETATM 297 H2 HOH A 99 -9.524 -10.890 -20.436 1.00 0.00 H -HETATM 298 O HOH A 100 -7.141 -4.987 -6.314 1.00 0.00 O -HETATM 299 H1 HOH A 100 -7.787 -5.180 -5.634 1.00 0.00 H -HETATM 300 H2 HOH A 100 -7.101 -4.031 -6.342 1.00 0.00 H -HETATM 301 O HOH A 101 0.938 6.438 -9.521 1.00 0.00 O -HETATM 302 H1 HOH A 101 0.594 5.904 -10.236 1.00 0.00 H -HETATM 303 H2 HOH A 101 0.183 6.935 -9.207 1.00 0.00 H -HETATM 304 O HOH A 102 5.706 -1.096 -7.302 1.00 0.00 O -HETATM 305 H1 HOH A 102 4.972 -0.582 -6.967 1.00 0.00 H -HETATM 306 H2 HOH A 102 5.312 -1.685 -7.946 1.00 0.00 H -HETATM 307 O HOH A 103 -1.206 16.319 9.488 1.00 0.00 O -HETATM 308 H1 HOH A 103 -1.905 16.060 8.887 1.00 0.00 H -HETATM 309 H2 HOH A 103 -0.774 15.498 9.721 1.00 0.00 H -HETATM 310 O HOH A 104 3.503 0.803 -6.733 1.00 0.00 O -HETATM 311 H1 HOH A 104 3.471 0.972 -7.675 1.00 0.00 H -HETATM 312 H2 HOH A 104 3.842 1.615 -6.355 1.00 0.00 H -HETATM 313 O HOH A 105 -6.565 -3.929 -2.216 1.00 0.00 O -HETATM 314 H1 HOH A 105 -6.668 -2.978 -2.210 1.00 0.00 H -HETATM 315 H2 HOH A 105 -7.168 -4.240 -1.541 1.00 0.00 H -HETATM 316 O HOH A 106 4.700 -1.212 -14.335 1.00 0.00 O -HETATM 317 H1 HOH A 106 5.591 -1.129 -14.674 1.00 0.00 H -HETATM 318 H2 HOH A 106 4.183 -0.608 -14.868 1.00 0.00 H -HETATM 319 O HOH A 107 3.645 2.680 6.952 1.00 0.00 O -HETATM 320 H1 HOH A 107 3.223 3.533 6.853 1.00 0.00 H -HETATM 321 H2 HOH A 107 4.474 2.872 7.391 1.00 0.00 H -HETATM 322 O HOH A 108 -10.732 -4.580 -2.492 1.00 0.00 O -HETATM 323 H1 HOH A 108 -11.673 -4.715 -2.600 1.00 0.00 H -HETATM 324 H2 HOH A 108 -10.543 -4.896 -1.608 1.00 0.00 H -HETATM 325 O HOH A 109 -14.217 -14.674 0.305 1.00 0.00 O -HETATM 326 H1 HOH A 109 -14.525 -14.093 1.000 1.00 0.00 H -HETATM 327 H2 HOH A 109 -13.425 -15.076 0.661 1.00 0.00 H -HETATM 328 O HOH A 110 -6.435 9.349 1.695 1.00 0.00 O -HETATM 329 H1 HOH A 110 -6.350 9.417 0.744 1.00 0.00 H -HETATM 330 H2 HOH A 110 -5.570 9.067 1.994 1.00 0.00 H -HETATM 331 O HOH A 111 -1.091 -6.844 1.196 1.00 0.00 O -HETATM 332 H1 HOH A 111 -1.606 -6.404 0.520 1.00 0.00 H -HETATM 333 H2 HOH A 111 -1.539 -6.632 2.015 1.00 0.00 H -HETATM 334 O HOH A 112 -0.442 4.078 -2.655 1.00 0.00 O -HETATM 335 H1 HOH A 112 0.224 3.799 -2.027 1.00 0.00 H -HETATM 336 H2 HOH A 112 0.020 4.119 -3.492 1.00 0.00 H -HETATM 337 O HOH A 113 6.277 -8.040 20.185 1.00 0.00 O -HETATM 338 H1 HOH A 113 6.635 -8.891 19.933 1.00 0.00 H -HETATM 339 H2 HOH A 113 6.146 -7.579 19.356 1.00 0.00 H -HETATM 340 O HOH A 114 1.701 1.995 1.907 1.00 0.00 O -HETATM 341 H1 HOH A 114 1.357 1.438 2.606 1.00 0.00 H -HETATM 342 H2 HOH A 114 1.676 2.880 2.271 1.00 0.00 H -HETATM 343 O HOH A 115 -3.011 -0.549 2.191 1.00 0.00 O -HETATM 344 H1 HOH A 115 -3.017 0.400 2.065 1.00 0.00 H -HETATM 345 H2 HOH A 115 -2.954 -0.908 1.305 1.00 0.00 H -HETATM 346 O HOH A 116 0.634 3.760 -11.302 1.00 0.00 O -HETATM 347 H1 HOH A 116 0.424 3.035 -11.890 1.00 0.00 H -HETATM 348 H2 HOH A 116 1.371 4.204 -11.722 1.00 0.00 H -HETATM 349 O HOH A 117 -10.079 -9.877 -2.627 1.00 0.00 O -HETATM 350 H1 HOH A 117 -9.729 -9.437 -3.402 1.00 0.00 H -HETATM 351 H2 HOH A 117 -10.854 -10.341 -2.944 1.00 0.00 H -HETATM 352 O HOH A 118 5.219 -4.232 1.067 1.00 0.00 O -HETATM 353 H1 HOH A 118 5.440 -3.839 1.911 1.00 0.00 H -HETATM 354 H2 HOH A 118 5.640 -3.666 0.421 1.00 0.00 H -HETATM 355 O HOH A 119 12.879 -4.274 -17.135 1.00 0.00 O -HETATM 356 H1 HOH A 119 13.237 -4.245 -18.022 1.00 0.00 H -HETATM 357 H2 HOH A 119 13.203 -3.475 -16.719 1.00 0.00 H -HETATM 358 O HOH A 120 0.002 10.072 7.782 1.00 0.00 O -HETATM 359 H1 HOH A 120 0.039 10.152 6.829 1.00 0.00 H -HETATM 360 H2 HOH A 120 0.177 10.956 8.105 1.00 0.00 H -HETATM 361 O HOH A 121 -0.343 10.503 4.673 1.00 0.00 O -HETATM 362 H1 HOH A 121 0.603 10.407 4.784 1.00 0.00 H -HETATM 363 H2 HOH A 121 -0.516 10.179 3.789 1.00 0.00 H -HETATM 364 O HOH A 122 -4.568 0.406 11.929 1.00 0.00 O -HETATM 365 H1 HOH A 122 -4.175 -0.441 12.143 1.00 0.00 H -HETATM 366 H2 HOH A 122 -4.272 0.588 11.037 1.00 0.00 H -HETATM 367 O HOH A 123 -4.753 1.747 -0.057 1.00 0.00 O -HETATM 368 H1 HOH A 123 -4.568 2.309 -0.809 1.00 0.00 H -HETATM 369 H2 HOH A 123 -3.891 1.533 0.300 1.00 0.00 H -HETATM 370 O HOH A 124 -1.687 12.995 -12.008 1.00 0.00 O -HETATM 371 H1 HOH A 124 -2.215 12.917 -12.803 1.00 0.00 H -HETATM 372 H2 HOH A 124 -0.861 13.377 -12.305 1.00 0.00 H -HETATM 373 O HOH A 125 2.408 -2.976 -2.295 1.00 0.00 O -HETATM 374 H1 HOH A 125 2.733 -3.874 -2.356 1.00 0.00 H -HETATM 375 H2 HOH A 125 2.641 -2.695 -1.410 1.00 0.00 H -HETATM 376 O HOH A 126 -0.195 0.054 -7.616 1.00 0.00 O -HETATM 377 H1 HOH A 126 0.069 0.670 -8.299 1.00 0.00 H -HETATM 378 H2 HOH A 126 -0.883 -0.474 -8.022 1.00 0.00 H -HETATM 379 O HOH A 127 -12.041 1.459 6.096 1.00 0.00 O -HETATM 380 H1 HOH A 127 -11.977 0.602 5.675 1.00 0.00 H -HETATM 381 H2 HOH A 127 -11.464 1.396 6.858 1.00 0.00 H -HETATM 382 O HOH A 128 -0.573 -3.355 -2.190 1.00 0.00 O -HETATM 383 H1 HOH A 128 0.351 -3.184 -2.013 1.00 0.00 H -HETATM 384 H2 HOH A 128 -0.661 -3.241 -3.137 1.00 0.00 H -HETATM 385 O HOH A 129 4.074 -0.637 -0.227 1.00 0.00 O -HETATM 386 H1 HOH A 129 3.201 -0.906 0.057 1.00 0.00 H -HETATM 387 H2 HOH A 129 4.058 0.319 -0.178 1.00 0.00 H -HETATM 388 O HOH A 130 6.732 2.153 19.458 1.00 0.00 O -HETATM 389 H1 HOH A 130 7.170 1.733 20.199 1.00 0.00 H -HETATM 390 H2 HOH A 130 7.372 2.782 19.126 1.00 0.00 H -HETATM 391 O HOH A 131 -7.809 8.353 -14.134 1.00 0.00 O -HETATM 392 H1 HOH A 131 -8.156 9.196 -13.844 1.00 0.00 H -HETATM 393 H2 HOH A 131 -8.353 8.115 -14.885 1.00 0.00 H -HETATM 394 O HOH A 132 1.220 -4.060 11.476 1.00 0.00 O -HETATM 395 H1 HOH A 132 1.402 -4.306 12.382 1.00 0.00 H -HETATM 396 H2 HOH A 132 0.553 -4.683 11.187 1.00 0.00 H -HETATM 397 O HOH A 133 -2.875 0.991 9.800 1.00 0.00 O -HETATM 398 H1 HOH A 133 -2.345 1.203 9.031 1.00 0.00 H -HETATM 399 H2 HOH A 133 -2.600 0.108 10.046 1.00 0.00 H -HETATM 400 O HOH A 134 3.429 8.071 -8.999 1.00 0.00 O -HETATM 401 H1 HOH A 134 2.700 7.462 -9.114 1.00 0.00 H -HETATM 402 H2 HOH A 134 4.149 7.527 -8.679 1.00 0.00 H -HETATM 403 O HOH A 135 -3.784 12.409 -14.016 1.00 0.00 O -HETATM 404 H1 HOH A 135 -4.419 13.067 -14.299 1.00 0.00 H -HETATM 405 H2 HOH A 135 -4.240 11.574 -14.123 1.00 0.00 H -HETATM 406 O HOH A 136 12.306 -7.506 8.702 1.00 0.00 O -HETATM 407 H1 HOH A 136 12.747 -8.293 9.021 1.00 0.00 H -HETATM 408 H2 HOH A 136 12.019 -7.053 9.495 1.00 0.00 H -HETATM 409 O HOH A 137 -8.118 -9.412 -4.663 1.00 0.00 O -HETATM 410 H1 HOH A 137 -7.700 -10.186 -4.286 1.00 0.00 H -HETATM 411 H2 HOH A 137 -7.470 -8.715 -4.558 1.00 0.00 H -HETATM 412 O HOH A 138 2.187 -12.083 2.022 1.00 0.00 O -HETATM 413 H1 HOH A 138 1.380 -11.708 2.377 1.00 0.00 H -HETATM 414 H2 HOH A 138 2.095 -11.997 1.073 1.00 0.00 H -HETATM 415 O HOH A 139 -2.822 5.023 -3.870 1.00 0.00 O -HETATM 416 H1 HOH A 139 -1.999 4.722 -3.486 1.00 0.00 H -HETATM 417 H2 HOH A 139 -2.558 5.549 -4.624 1.00 0.00 H -HETATM 418 O HOH A 140 11.036 2.144 24.940 1.00 0.00 O -HETATM 419 H1 HOH A 140 11.173 3.091 24.975 1.00 0.00 H -HETATM 420 H2 HOH A 140 10.100 2.031 25.108 1.00 0.00 H -HETATM 421 O HOH A 141 4.140 3.478 -1.230 1.00 0.00 O -HETATM 422 H1 HOH A 141 4.368 4.257 -0.723 1.00 0.00 H -HETATM 423 H2 HOH A 141 4.881 2.885 -1.106 1.00 0.00 H -HETATM 424 O HOH A 142 -1.992 8.889 -1.202 1.00 0.00 O -HETATM 425 H1 HOH A 142 -1.205 9.294 -1.568 1.00 0.00 H -HETATM 426 H2 HOH A 142 -1.917 7.964 -1.436 1.00 0.00 H -HETATM 427 O HOH A 143 8.837 -1.323 -3.018 1.00 0.00 O -HETATM 428 H1 HOH A 143 9.472 -1.947 -3.368 1.00 0.00 H -HETATM 429 H2 HOH A 143 9.278 -0.930 -2.264 1.00 0.00 H -HETATM 430 O HOH A 144 1.019 4.309 -4.944 1.00 0.00 O -HETATM 431 H1 HOH A 144 1.137 4.464 -5.881 1.00 0.00 H -HETATM 432 H2 HOH A 144 1.331 3.414 -4.808 1.00 0.00 H -HETATM 433 O HOH A 145 12.131 -12.162 -10.872 1.00 0.00 O -HETATM 434 H1 HOH A 145 11.503 -12.070 -11.588 1.00 0.00 H -HETATM 435 H2 HOH A 145 11.597 -12.122 -10.078 1.00 0.00 H -HETATM 436 O HOH A 146 11.185 9.030 2.446 1.00 0.00 O -HETATM 437 H1 HOH A 146 12.120 9.164 2.289 1.00 0.00 H -HETATM 438 H2 HOH A 146 10.898 9.833 2.880 1.00 0.00 H -HETATM 439 O HOH A 147 3.985 -6.379 4.611 1.00 0.00 O -HETATM 440 H1 HOH A 147 4.434 -5.770 5.196 1.00 0.00 H -HETATM 441 H2 HOH A 147 4.688 -6.898 4.219 1.00 0.00 H -HETATM 442 O HOH A 148 -1.720 1.924 1.181 1.00 0.00 O -HETATM 443 H1 HOH A 148 -1.041 1.874 0.508 1.00 0.00 H -HETATM 444 H2 HOH A 148 -1.876 2.862 1.295 1.00 0.00 H -HETATM 445 O HOH A 149 0.212 -4.225 4.087 1.00 0.00 O -HETATM 446 H1 HOH A 149 -0.053 -5.144 4.086 1.00 0.00 H -HETATM 447 H2 HOH A 149 0.843 -4.158 4.804 1.00 0.00 H -HETATM 448 O HOH A 150 5.988 -6.952 -2.236 1.00 0.00 O -HETATM 449 H1 HOH A 150 6.558 -6.468 -2.834 1.00 0.00 H -HETATM 450 H2 HOH A 150 5.278 -6.342 -2.036 1.00 0.00 H -HETATM 451 O HOH A 151 18.219 7.217 -9.294 1.00 0.00 O -HETATM 452 H1 HOH A 151 17.950 8.062 -9.654 1.00 0.00 H -HETATM 453 H2 HOH A 151 17.829 6.570 -9.881 1.00 0.00 H -HETATM 454 O HOH A 152 -7.122 -11.648 -3.616 1.00 0.00 O -HETATM 455 H1 HOH A 152 -6.227 -11.585 -3.284 1.00 0.00 H -HETATM 456 H2 HOH A 152 -7.369 -12.560 -3.467 1.00 0.00 H -HETATM 457 O HOH A 153 3.102 10.542 -16.189 1.00 0.00 O -HETATM 458 H1 HOH A 153 2.737 10.850 -17.019 1.00 0.00 H -HETATM 459 H2 HOH A 153 3.997 10.280 -16.403 1.00 0.00 H -HETATM 460 O HOH A 154 3.588 10.944 -4.817 1.00 0.00 O -HETATM 461 H1 HOH A 154 3.699 10.007 -4.976 1.00 0.00 H -HETATM 462 H2 HOH A 154 3.476 11.015 -3.869 1.00 0.00 H -HETATM 463 O HOH A 155 6.058 -7.506 -31.046 1.00 0.00 O -HETATM 464 H1 HOH A 155 5.627 -7.393 -30.199 1.00 0.00 H -HETATM 465 H2 HOH A 155 6.669 -6.771 -31.104 1.00 0.00 H -HETATM 466 O HOH A 156 -11.507 -1.654 0.763 1.00 0.00 O -HETATM 467 H1 HOH A 156 -10.736 -1.352 0.284 1.00 0.00 H -HETATM 468 H2 HOH A 156 -11.317 -2.568 0.973 1.00 0.00 H -HETATM 469 O HOH A 157 1.354 13.771 -12.542 1.00 0.00 O -HETATM 470 H1 HOH A 157 1.609 13.596 -13.448 1.00 0.00 H -HETATM 471 H2 HOH A 157 2.173 14.004 -12.104 1.00 0.00 H -HETATM 472 O HOH A 158 2.071 -5.887 -2.547 1.00 0.00 O -HETATM 473 H1 HOH A 158 1.649 -5.502 -1.778 1.00 0.00 H -HETATM 474 H2 HOH A 158 1.354 -6.047 -3.159 1.00 0.00 H -HETATM 475 O HOH A 159 10.138 -1.476 -14.315 1.00 0.00 O -HETATM 476 H1 HOH A 159 9.645 -1.753 -13.543 1.00 0.00 H -HETATM 477 H2 HOH A 159 10.891 -1.002 -13.961 1.00 0.00 H -HETATM 478 O HOH A 160 -26.592 -1.296 -2.954 1.00 0.00 O -HETATM 479 H1 HOH A 160 -25.760 -1.405 -3.414 1.00 0.00 H -HETATM 480 H2 HOH A 160 -27.199 -0.985 -3.627 1.00 0.00 H -HETATM 481 O HOH A 161 9.688 -4.204 13.443 1.00 0.00 O -HETATM 482 H1 HOH A 161 10.086 -4.234 14.313 1.00 0.00 H -HETATM 483 H2 HOH A 161 9.100 -3.449 13.474 1.00 0.00 H -HETATM 484 O HOH A 162 -3.205 11.314 -20.626 1.00 0.00 O -HETATM 485 H1 HOH A 162 -2.905 11.609 -19.766 1.00 0.00 H -HETATM 486 H2 HOH A 162 -2.991 10.382 -20.648 1.00 0.00 H -HETATM 487 O HOH A 163 -4.547 -13.294 -1.350 1.00 0.00 O -HETATM 488 H1 HOH A 163 -4.318 -12.587 -1.953 1.00 0.00 H -HETATM 489 H2 HOH A 163 -3.740 -13.466 -0.864 1.00 0.00 H -HETATM 490 O HOH A 164 -10.487 14.767 -12.340 1.00 0.00 O -HETATM 491 H1 HOH A 164 -9.923 15.232 -12.958 1.00 0.00 H -HETATM 492 H2 HOH A 164 -10.139 14.998 -11.478 1.00 0.00 H -HETATM 493 O HOH A 165 14.034 1.482 2.537 1.00 0.00 O -HETATM 494 H1 HOH A 165 14.605 1.295 1.791 1.00 0.00 H -HETATM 495 H2 HOH A 165 13.147 1.370 2.193 1.00 0.00 H -HETATM 496 O HOH A 166 8.364 15.889 2.540 1.00 0.00 O -HETATM 497 H1 HOH A 166 7.480 16.096 2.845 1.00 0.00 H -HETATM 498 H2 HOH A 166 8.489 14.969 2.775 1.00 0.00 H -HETATM 499 O HOH A 167 -13.842 -22.181 -0.755 1.00 0.00 O -HETATM 500 H1 HOH A 167 -13.072 -21.823 -0.312 1.00 0.00 H -HETATM 501 H2 HOH A 167 -14.554 -21.589 -0.514 1.00 0.00 H -HETATM 502 O HOH A 168 -13.722 5.870 -2.558 1.00 0.00 O -HETATM 503 H1 HOH A 168 -13.979 5.448 -1.738 1.00 0.00 H -HETATM 504 H2 HOH A 168 -13.341 6.705 -2.289 1.00 0.00 H -HETATM 505 O HOH A 169 -6.599 17.519 -6.054 1.00 0.00 O -HETATM 506 H1 HOH A 169 -7.248 18.208 -5.914 1.00 0.00 H -HETATM 507 H2 HOH A 169 -5.756 17.950 -5.908 1.00 0.00 H -HETATM 508 O HOH A 170 6.048 -22.230 -3.322 1.00 0.00 O -HETATM 509 H1 HOH A 170 5.718 -22.218 -2.424 1.00 0.00 H -HETATM 510 H2 HOH A 170 6.837 -21.688 -3.295 1.00 0.00 H -HETATM 511 O HOH A 171 -4.614 -9.292 -7.089 1.00 0.00 O -HETATM 512 H1 HOH A 171 -4.670 -10.241 -7.193 1.00 0.00 H -HETATM 513 H2 HOH A 171 -3.937 -9.162 -6.425 1.00 0.00 H -HETATM 514 O HOH A 172 13.814 -7.934 2.622 1.00 0.00 O -HETATM 515 H1 HOH A 172 13.876 -8.882 2.741 1.00 0.00 H -HETATM 516 H2 HOH A 172 13.059 -7.675 3.151 1.00 0.00 H -HETATM 517 O HOH A 173 -1.269 0.730 18.158 1.00 0.00 O -HETATM 518 H1 HOH A 173 -1.540 0.006 18.723 1.00 0.00 H -HETATM 519 H2 HOH A 173 -1.552 0.469 17.281 1.00 0.00 H -HETATM 520 O HOH A 174 3.831 5.969 -5.779 1.00 0.00 O -HETATM 521 H1 HOH A 174 3.157 5.910 -6.456 1.00 0.00 H -HETATM 522 H2 HOH A 174 4.583 6.361 -6.223 1.00 0.00 H -HETATM 523 O HOH A 175 4.040 1.572 3.895 1.00 0.00 O -HETATM 524 H1 HOH A 175 4.396 2.273 4.441 1.00 0.00 H -HETATM 525 H2 HOH A 175 3.394 2.006 3.337 1.00 0.00 H -HETATM 526 O HOH A 176 2.721 14.443 2.190 1.00 0.00 O -HETATM 527 H1 HOH A 176 3.046 14.415 3.090 1.00 0.00 H -HETATM 528 H2 HOH A 176 3.472 14.731 1.672 1.00 0.00 H -HETATM 529 O HOH A 177 12.846 9.897 -1.084 1.00 0.00 O -HETATM 530 H1 HOH A 177 13.538 10.252 -1.643 1.00 0.00 H -HETATM 531 H2 HOH A 177 12.463 9.187 -1.599 1.00 0.00 H -HETATM 532 O HOH A 178 17.501 2.764 -7.636 1.00 0.00 O -HETATM 533 H1 HOH A 178 18.308 3.172 -7.947 1.00 0.00 H -HETATM 534 H2 HOH A 178 17.396 1.988 -8.186 1.00 0.00 H -HETATM 535 O HOH A 179 4.122 -3.650 -4.772 1.00 0.00 O -HETATM 536 H1 HOH A 179 4.882 -3.084 -4.638 1.00 0.00 H -HETATM 537 H2 HOH A 179 3.446 -3.282 -4.203 1.00 0.00 H -HETATM 538 O HOH A 180 -12.752 6.627 8.871 1.00 0.00 O -HETATM 539 H1 HOH A 180 -12.289 6.624 8.033 1.00 0.00 H -HETATM 540 H2 HOH A 180 -12.223 6.068 9.440 1.00 0.00 H -HETATM 541 O HOH A 181 -12.251 -6.002 -7.633 1.00 0.00 O -HETATM 542 H1 HOH A 181 -12.688 -5.596 -8.382 1.00 0.00 H -HETATM 543 H2 HOH A 181 -11.618 -5.346 -7.340 1.00 0.00 H -HETATM 544 O HOH A 182 10.089 9.355 -6.385 1.00 0.00 O -HETATM 545 H1 HOH A 182 10.901 9.673 -5.992 1.00 0.00 H -HETATM 546 H2 HOH A 182 9.436 10.018 -6.158 1.00 0.00 H -HETATM 547 O HOH A 183 -20.599 -10.685 1.987 1.00 0.00 O -HETATM 548 H1 HOH A 183 -20.954 -10.620 1.101 1.00 0.00 H -HETATM 549 H2 HOH A 183 -21.021 -11.460 2.358 1.00 0.00 H -HETATM 550 O HOH A 184 -4.928 -5.095 4.715 1.00 0.00 O -HETATM 551 H1 HOH A 184 -5.742 -5.230 4.229 1.00 0.00 H -HETATM 552 H2 HOH A 184 -4.881 -4.148 4.844 1.00 0.00 H -HETATM 553 O HOH A 185 4.742 7.077 2.187 1.00 0.00 O -HETATM 554 H1 HOH A 185 4.727 6.485 2.939 1.00 0.00 H -HETATM 555 H2 HOH A 185 3.834 7.363 2.088 1.00 0.00 H -HETATM 556 O HOH A 186 5.531 6.744 -7.949 1.00 0.00 O -HETATM 557 H1 HOH A 186 5.679 5.888 -8.352 1.00 0.00 H -HETATM 558 H2 HOH A 186 6.382 7.179 -7.991 1.00 0.00 H -HETATM 559 O HOH A 187 -5.233 6.055 -24.828 1.00 0.00 O -HETATM 560 H1 HOH A 187 -5.260 5.591 -25.666 1.00 0.00 H -HETATM 561 H2 HOH A 187 -4.843 5.427 -24.219 1.00 0.00 H -HETATM 562 O HOH A 188 -3.194 3.322 -1.601 1.00 0.00 O -HETATM 563 H1 HOH A 188 -2.381 2.913 -1.898 1.00 0.00 H -HETATM 564 H2 HOH A 188 -3.286 4.099 -2.152 1.00 0.00 H -HETATM 565 O HOH A 189 10.364 2.211 -0.914 1.00 0.00 O -HETATM 566 H1 HOH A 189 9.761 2.908 -1.174 1.00 0.00 H -HETATM 567 H2 HOH A 189 10.638 2.448 -0.028 1.00 0.00 H -HETATM 568 O HOH A 190 -9.743 -8.436 -0.120 1.00 0.00 O -HETATM 569 H1 HOH A 190 -8.854 -8.110 -0.261 1.00 0.00 H -HETATM 570 H2 HOH A 190 -9.968 -8.880 -0.937 1.00 0.00 H -HETATM 571 O HOH A 191 8.536 -13.689 1.107 1.00 0.00 O -HETATM 572 H1 HOH A 191 9.007 -13.061 0.559 1.00 0.00 H -HETATM 573 H2 HOH A 191 8.194 -13.165 1.832 1.00 0.00 H -HETATM 574 O HOH A 192 -5.402 -8.752 -2.635 1.00 0.00 O -HETATM 575 H1 HOH A 192 -5.454 -7.815 -2.828 1.00 0.00 H -HETATM 576 H2 HOH A 192 -4.476 -8.968 -2.746 1.00 0.00 H -HETATM 577 O HOH A 193 1.333 -7.268 -15.098 1.00 0.00 O -HETATM 578 H1 HOH A 193 0.999 -7.589 -15.936 1.00 0.00 H -HETATM 579 H2 HOH A 193 2.272 -7.151 -15.243 1.00 0.00 H -HETATM 580 O HOH A 194 0.219 -13.821 5.246 1.00 0.00 O -HETATM 581 H1 HOH A 194 -0.524 -14.224 5.695 1.00 0.00 H -HETATM 582 H2 HOH A 194 -0.175 -13.323 4.530 1.00 0.00 H -HETATM 583 O HOH A 195 -7.005 -2.339 -8.831 1.00 0.00 O -HETATM 584 H1 HOH A 195 -6.852 -2.140 -7.907 1.00 0.00 H -HETATM 585 H2 HOH A 195 -6.198 -2.763 -9.123 1.00 0.00 H -HETATM 586 O HOH A 196 19.322 -5.948 -8.872 1.00 0.00 O -HETATM 587 H1 HOH A 196 19.799 -6.758 -9.053 1.00 0.00 H -HETATM 588 H2 HOH A 196 18.500 -6.237 -8.474 1.00 0.00 H -HETATM 589 O HOH A 197 8.867 -6.673 2.874 1.00 0.00 O -HETATM 590 H1 HOH A 197 8.927 -7.603 2.653 1.00 0.00 H -HETATM 591 H2 HOH A 197 9.730 -6.454 3.226 1.00 0.00 H -HETATM 592 O HOH A 198 3.233 7.802 7.804 1.00 0.00 O -HETATM 593 H1 HOH A 198 3.798 8.165 8.486 1.00 0.00 H -HETATM 594 H2 HOH A 198 3.203 8.482 7.131 1.00 0.00 H -HETATM 595 O HOH A 199 14.996 3.021 4.626 1.00 0.00 O -HETATM 596 H1 HOH A 199 15.582 2.270 4.533 1.00 0.00 H -HETATM 597 H2 HOH A 199 14.262 2.826 4.043 1.00 0.00 H -HETATM 598 O HOH A 200 -4.951 0.462 7.082 1.00 0.00 O -HETATM 599 H1 HOH A 200 -4.573 0.866 7.863 1.00 0.00 H -HETATM 600 H2 HOH A 200 -4.228 0.431 6.454 1.00 0.00 H -HETATM 601 O HOH A 201 -18.687 -0.250 -5.368 1.00 0.00 O -HETATM 602 H1 HOH A 201 -17.872 -0.073 -5.839 1.00 0.00 H -HETATM 603 H2 HOH A 201 -19.377 -0.064 -6.004 1.00 0.00 H -HETATM 604 O HOH A 202 3.307 -9.798 6.429 1.00 0.00 O -HETATM 605 H1 HOH A 202 2.866 -9.061 6.851 1.00 0.00 H -HETATM 606 H2 HOH A 202 3.351 -9.555 5.504 1.00 0.00 H -HETATM 607 O HOH A 203 3.235 -8.515 -2.163 1.00 0.00 O -HETATM 608 H1 HOH A 203 3.443 -8.556 -1.230 1.00 0.00 H -HETATM 609 H2 HOH A 203 2.899 -7.629 -2.296 1.00 0.00 H -HETATM 610 O HOH A 204 0.895 -0.110 3.388 1.00 0.00 O -HETATM 611 H1 HOH A 204 0.766 -0.349 4.306 1.00 0.00 H -HETATM 612 H2 HOH A 204 0.115 -0.440 2.942 1.00 0.00 H -HETATM 613 O HOH A 205 -3.850 -22.262 12.504 1.00 0.00 O -HETATM 614 H1 HOH A 205 -4.248 -23.031 12.095 1.00 0.00 H -HETATM 615 H2 HOH A 205 -3.433 -22.599 13.296 1.00 0.00 H -HETATM 616 O HOH A 206 14.157 10.754 -14.398 1.00 0.00 O -HETATM 617 H1 HOH A 206 13.771 9.989 -14.824 1.00 0.00 H -HETATM 618 H2 HOH A 206 14.008 10.609 -13.464 1.00 0.00 H -HETATM 619 O HOH A 207 11.349 1.349 2.114 1.00 0.00 O -HETATM 620 H1 HOH A 207 11.230 1.911 2.879 1.00 0.00 H -HETATM 621 H2 HOH A 207 10.822 0.572 2.303 1.00 0.00 H -HETATM 622 O HOH A 208 -2.990 12.568 11.725 1.00 0.00 O -HETATM 623 H1 HOH A 208 -3.279 13.003 10.923 1.00 0.00 H -HETATM 624 H2 HOH A 208 -3.800 12.289 12.153 1.00 0.00 H -HETATM 625 O HOH A 209 1.377 7.592 19.051 1.00 0.00 O -HETATM 626 H1 HOH A 209 1.732 7.088 18.318 1.00 0.00 H -HETATM 627 H2 HOH A 209 0.472 7.291 19.132 1.00 0.00 H -HETATM 628 O HOH A 210 -11.644 -9.163 -9.273 1.00 0.00 O -HETATM 629 H1 HOH A 210 -12.098 -8.836 -10.050 1.00 0.00 H -HETATM 630 H2 HOH A 210 -11.765 -8.476 -8.617 1.00 0.00 H -HETATM 631 O HOH A 211 -5.181 -6.590 -6.610 1.00 0.00 O -HETATM 632 H1 HOH A 211 -5.471 -7.415 -6.222 1.00 0.00 H -HETATM 633 H2 HOH A 211 -5.876 -5.967 -6.397 1.00 0.00 H -HETATM 634 O HOH A 212 1.722 -4.565 -6.018 1.00 0.00 O -HETATM 635 H1 HOH A 212 2.614 -4.297 -5.799 1.00 0.00 H -HETATM 636 H2 HOH A 212 1.563 -5.337 -5.475 1.00 0.00 H -HETATM 637 O HOH A 213 2.110 2.272 -3.653 1.00 0.00 O -HETATM 638 H1 HOH A 213 1.900 1.374 -3.907 1.00 0.00 H -HETATM 639 H2 HOH A 213 1.813 2.341 -2.746 1.00 0.00 H -HETATM 640 O HOH A 214 12.917 12.893 -20.069 1.00 0.00 O -HETATM 641 H1 HOH A 214 13.194 12.251 -20.723 1.00 0.00 H -HETATM 642 H2 HOH A 214 13.267 12.560 -19.242 1.00 0.00 H -HETATM 643 O HOH A 215 1.609 -21.521 0.571 1.00 0.00 O -HETATM 644 H1 HOH A 215 0.722 -21.581 0.215 1.00 0.00 H -HETATM 645 H2 HOH A 215 1.534 -21.867 1.460 1.00 0.00 H -HETATM 646 O HOH A 216 -14.025 -8.081 3.367 1.00 0.00 O -HETATM 647 H1 HOH A 216 -13.770 -7.812 2.484 1.00 0.00 H -HETATM 648 H2 HOH A 216 -13.293 -7.811 3.921 1.00 0.00 H -HETATM 649 O HOH A 217 6.722 10.788 -6.024 1.00 0.00 O -HETATM 650 H1 HOH A 217 6.131 11.476 -6.331 1.00 0.00 H -HETATM 651 H2 HOH A 217 6.816 10.200 -6.773 1.00 0.00 H -HETATM 652 O HOH A 218 15.570 15.185 -0.246 1.00 0.00 O -HETATM 653 H1 HOH A 218 15.653 16.023 0.210 1.00 0.00 H -HETATM 654 H2 HOH A 218 14.945 15.356 -0.950 1.00 0.00 H -HETATM 655 O HOH A 219 -16.798 6.607 -3.084 1.00 0.00 O -HETATM 656 H1 HOH A 219 -16.130 5.966 -2.841 1.00 0.00 H -HETATM 657 H2 HOH A 219 -16.807 6.593 -4.041 1.00 0.00 H -HETATM 658 O HOH A 220 -3.308 5.196 -10.657 1.00 0.00 O -HETATM 659 H1 HOH A 220 -4.164 5.138 -10.233 1.00 0.00 H -HETATM 660 H2 HOH A 220 -3.343 4.547 -11.359 1.00 0.00 H -HETATM 661 O HOH A 221 3.286 2.926 -9.262 1.00 0.00 O -HETATM 662 H1 HOH A 221 3.523 3.566 -9.933 1.00 0.00 H -HETATM 663 H2 HOH A 221 2.955 2.174 -9.754 1.00 0.00 H -HETATM 664 O HOH A 222 4.458 12.818 -8.761 1.00 0.00 O -HETATM 665 H1 HOH A 222 3.560 12.489 -8.783 1.00 0.00 H -HETATM 666 H2 HOH A 222 4.555 13.194 -7.886 1.00 0.00 H -HETATM 667 O HOH A 223 12.604 20.082 -14.281 1.00 0.00 O -HETATM 668 H1 HOH A 223 13.238 20.300 -13.597 1.00 0.00 H -HETATM 669 H2 HOH A 223 12.225 20.924 -14.534 1.00 0.00 H -HETATM 670 O HOH A 224 -11.144 -0.405 -7.779 1.00 0.00 O -HETATM 671 H1 HOH A 224 -11.160 -0.155 -6.855 1.00 0.00 H -HETATM 672 H2 HOH A 224 -11.942 -0.918 -7.903 1.00 0.00 H -HETATM 673 O HOH A 225 7.535 3.311 3.215 1.00 0.00 O -HETATM 674 H1 HOH A 225 7.337 2.456 2.832 1.00 0.00 H -HETATM 675 H2 HOH A 225 8.299 3.621 2.728 1.00 0.00 H -HETATM 676 O HOH A 226 6.109 2.051 -12.224 1.00 0.00 O -HETATM 677 H1 HOH A 226 6.591 1.786 -13.008 1.00 0.00 H -HETATM 678 H2 HOH A 226 6.773 2.084 -11.535 1.00 0.00 H -HETATM 679 O HOH A 227 22.400 -3.531 6.427 1.00 0.00 O -HETATM 680 H1 HOH A 227 22.148 -4.043 7.195 1.00 0.00 H -HETATM 681 H2 HOH A 227 23.353 -3.610 6.388 1.00 0.00 H -HETATM 682 O HOH A 228 -15.872 3.201 -5.456 1.00 0.00 O -HETATM 683 H1 HOH A 228 -15.927 4.156 -5.492 1.00 0.00 H -HETATM 684 H2 HOH A 228 -16.427 2.957 -4.715 1.00 0.00 H -HETATM 685 O HOH A 229 -1.779 -5.365 -0.956 1.00 0.00 O -HETATM 686 H1 HOH A 229 -1.337 -4.541 -1.163 1.00 0.00 H -HETATM 687 H2 HOH A 229 -2.636 -5.101 -0.624 1.00 0.00 H -HETATM 688 O HOH A 230 20.505 6.828 -3.916 1.00 0.00 O -HETATM 689 H1 HOH A 230 20.479 5.992 -4.382 1.00 0.00 H -HETATM 690 H2 HOH A 230 21.274 6.764 -3.351 1.00 0.00 H -HETATM 691 O HOH A 231 -9.217 -11.938 -8.574 1.00 0.00 O -HETATM 692 H1 HOH A 231 -9.246 -12.773 -8.107 1.00 0.00 H -HETATM 693 H2 HOH A 231 -9.598 -11.307 -7.962 1.00 0.00 H -HETATM 694 O HOH A 232 6.745 2.347 -25.530 1.00 0.00 O -HETATM 695 H1 HOH A 232 5.947 2.208 -25.020 1.00 0.00 H -HETATM 696 H2 HOH A 232 7.122 3.151 -25.172 1.00 0.00 H -HETATM 697 O HOH A 233 -5.093 -6.226 -3.232 1.00 0.00 O -HETATM 698 H1 HOH A 233 -4.805 -5.776 -4.026 1.00 0.00 H -HETATM 699 H2 HOH A 233 -5.500 -5.541 -2.702 1.00 0.00 H -HETATM 700 O HOH A 234 0.155 17.348 15.170 1.00 0.00 O -HETATM 701 H1 HOH A 234 0.738 16.689 14.792 1.00 0.00 H -HETATM 702 H2 HOH A 234 0.665 18.158 15.153 1.00 0.00 H -HETATM 703 O HOH A 235 -5.998 -1.911 3.737 1.00 0.00 O -HETATM 704 H1 HOH A 235 -5.290 -1.400 4.129 1.00 0.00 H -HETATM 705 H2 HOH A 235 -6.647 -1.258 3.473 1.00 0.00 H -HETATM 706 O HOH A 236 3.040 -19.868 7.377 1.00 0.00 O -HETATM 707 H1 HOH A 236 3.181 -18.950 7.146 1.00 0.00 H -HETATM 708 H2 HOH A 236 3.767 -20.334 6.965 1.00 0.00 H -HETATM 709 O HOH A 237 -28.003 -14.209 -3.921 1.00 0.00 O -HETATM 710 H1 HOH A 237 -27.366 -14.271 -4.633 1.00 0.00 H -HETATM 711 H2 HOH A 237 -27.666 -14.798 -3.246 1.00 0.00 H -HETATM 712 O HOH A 238 -11.486 10.775 5.304 1.00 0.00 O -HETATM 713 H1 HOH A 238 -11.251 10.667 4.382 1.00 0.00 H -HETATM 714 H2 HOH A 238 -12.403 10.503 5.351 1.00 0.00 H -HETATM 715 O HOH A 239 8.375 -12.338 -2.150 1.00 0.00 O -HETATM 716 H1 HOH A 239 8.840 -12.732 -2.888 1.00 0.00 H -HETATM 717 H2 HOH A 239 9.033 -12.278 -1.457 1.00 0.00 H -HETATM 718 O HOH A 240 -4.127 5.864 1.422 1.00 0.00 O -HETATM 719 H1 HOH A 240 -4.928 5.814 1.944 1.00 0.00 H -HETATM 720 H2 HOH A 240 -4.434 5.973 0.522 1.00 0.00 H -HETATM 721 O HOH A 241 13.567 -20.481 -0.451 1.00 0.00 O -HETATM 722 H1 HOH A 241 13.345 -20.697 -1.357 1.00 0.00 H -HETATM 723 H2 HOH A 241 13.683 -19.531 -0.453 1.00 0.00 H -HETATM 724 O HOH A 242 -3.554 2.463 -5.213 1.00 0.00 O -HETATM 725 H1 HOH A 242 -3.491 3.378 -4.938 1.00 0.00 H -HETATM 726 H2 HOH A 242 -3.287 2.470 -6.132 1.00 0.00 H -HETATM 727 O HOH A 243 5.909 16.654 3.489 1.00 0.00 O -HETATM 728 H1 HOH A 243 5.629 16.513 4.394 1.00 0.00 H -HETATM 729 H2 HOH A 243 5.563 17.517 3.263 1.00 0.00 H -HETATM 730 O HOH A 244 -10.286 3.878 1.429 1.00 0.00 O -HETATM 731 H1 HOH A 244 -9.364 4.111 1.538 1.00 0.00 H -HETATM 732 H2 HOH A 244 -10.745 4.718 1.408 1.00 0.00 H -HETATM 733 O HOH A 245 -17.637 -9.399 -8.566 1.00 0.00 O -HETATM 734 H1 HOH A 245 -18.575 -9.467 -8.386 1.00 0.00 H -HETATM 735 H2 HOH A 245 -17.382 -10.278 -8.846 1.00 0.00 H -HETATM 736 O HOH A 246 16.315 -0.864 5.018 1.00 0.00 O -HETATM 737 H1 HOH A 246 16.699 -0.820 4.142 1.00 0.00 H -HETATM 738 H2 HOH A 246 16.905 -1.436 5.510 1.00 0.00 H -HETATM 739 O HOH A 247 7.813 -11.907 -8.519 1.00 0.00 O -HETATM 740 H1 HOH A 247 7.157 -11.210 -8.523 1.00 0.00 H -HETATM 741 H2 HOH A 247 8.517 -11.576 -9.076 1.00 0.00 H -HETATM 742 O HOH A 248 -3.896 -10.319 2.669 1.00 0.00 O -HETATM 743 H1 HOH A 248 -3.608 -9.407 2.714 1.00 0.00 H -HETATM 744 H2 HOH A 248 -3.461 -10.744 3.408 1.00 0.00 H -HETATM 745 O HOH A 249 15.049 3.942 7.068 1.00 0.00 O -HETATM 746 H1 HOH A 249 14.758 3.254 7.666 1.00 0.00 H -HETATM 747 H2 HOH A 249 14.886 3.587 6.194 1.00 0.00 H -HETATM 748 O HOH A 250 7.948 6.185 -13.690 1.00 0.00 O -HETATM 749 H1 HOH A 250 7.633 6.589 -14.498 1.00 0.00 H -HETATM 750 H2 HOH A 250 7.393 5.413 -13.575 1.00 0.00 H -HETATM 751 O HOH A 251 0.908 2.337 26.030 1.00 0.00 O -HETATM 752 H1 HOH A 251 1.456 1.553 26.026 1.00 0.00 H -HETATM 753 H2 HOH A 251 1.393 2.972 25.503 1.00 0.00 H -HETATM 754 O HOH A 252 1.687 -1.513 11.013 1.00 0.00 O -HETATM 755 H1 HOH A 252 1.263 -1.211 11.816 1.00 0.00 H -HETATM 756 H2 HOH A 252 1.345 -2.397 10.879 1.00 0.00 H -HETATM 757 O HOH A 253 0.494 -9.655 -0.920 1.00 0.00 O -HETATM 758 H1 HOH A 253 1.063 -10.423 -0.980 1.00 0.00 H -HETATM 759 H2 HOH A 253 1.069 -8.955 -0.612 1.00 0.00 H -HETATM 760 O HOH A 254 -8.862 -9.405 6.510 1.00 0.00 O -HETATM 761 H1 HOH A 254 -9.728 -9.219 6.149 1.00 0.00 H -HETATM 762 H2 HOH A 254 -8.846 -8.943 7.348 1.00 0.00 H -HETATM 763 O HOH A 255 3.579 -8.150 -19.729 1.00 0.00 O -HETATM 764 H1 HOH A 255 2.993 -8.089 -18.974 1.00 0.00 H -HETATM 765 H2 HOH A 255 4.455 -8.033 -19.363 1.00 0.00 H -HETATM 766 O HOH A 256 -4.992 -4.342 -28.853 1.00 0.00 O -HETATM 767 H1 HOH A 256 -4.762 -4.813 -29.654 1.00 0.00 H -HETATM 768 H2 HOH A 256 -4.961 -5.008 -28.166 1.00 0.00 H -HETATM 769 O HOH A 257 -8.621 -5.046 15.869 1.00 0.00 O -HETATM 770 H1 HOH A 257 -7.876 -4.700 16.360 1.00 0.00 H -HETATM 771 H2 HOH A 257 -9.389 -4.689 16.315 1.00 0.00 H -HETATM 772 O HOH A 258 -9.403 -1.218 -16.981 1.00 0.00 O -HETATM 773 H1 HOH A 258 -9.762 -1.227 -16.094 1.00 0.00 H -HETATM 774 H2 HOH A 258 -8.832 -1.986 -17.016 1.00 0.00 H -TER 775 HOH A 258 -END diff --git a/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.csv b/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.csv deleted file mode 100644 index 7d35915..0000000 --- a/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.csv +++ /dev/null @@ -1,6 +0,0 @@ -#"Step","Time (ps)","Potential Energy (kJ/mole)","Total Energy (kJ/mole)","Temperature (K)","Density (g/mL)","Speed (ns/day)" -1,0.001,-401208.60190434114,-401208.5772826981,0.3290336654735517,0.47864238895671385,0 -2,0.002,-401208.60481900413,-401208.52816177404,1.0244161774123326,0.47864238895671385,3.64 -3,0.003,-401208.6033518919,-401208.456792175,1.9585647006818292,0.47864238895671385,3.67 -4,0.004,-401208.59819743753,-401208.43796170974,2.1413253714754785,0.47864238895671385,3.66 -5,0.005,-401208.59397215425,-401208.4031522216,2.5500402986722586,0.47864238895671385,3.66 diff --git a/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.dcd b/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.dcd deleted file mode 100644 index efb4ac7..0000000 Binary files a/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.dcd and /dev/null differ diff --git a/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.pdb b/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.pdb deleted file mode 100644 index 7662861..0000000 --- a/test_stability_protocol/waterbox_5A_ani2x_torchani_NpT.pdb +++ /dev/null @@ -1,10 +0,0 @@ -REMARK 1 CREATED WITH OPENMM 8.0, 2023-10-21 -CRYST1 5.000 5.000 5.000 90.00 90.00 90.00 P 1 1 -HETATM 1 O HOH A 1 21.719 -9.109 -10.876 1.00 0.00 O -HETATM 2 H1 HOH A 1 22.548 -9.587 -10.836 1.00 0.00 H -HETATM 3 H2 HOH A 1 21.793 -8.567 -11.662 1.00 0.00 H -HETATM 4 O HOH A 2 26.311 -8.874 -9.109 1.00 0.00 O -HETATM 5 H1 HOH A 2 26.523 -9.020 -10.031 1.00 0.00 H -HETATM 6 H2 HOH A 2 25.430 -8.500 -9.121 1.00 0.00 H -TER 7 HOH A 2 -END