manuscript.tex

\documentclass[11pt,a4paper,titlepage,twoside,openright]{book}

% Use the UniMelb Dissertation Template
\usepackage{style/uomthesis}

% For drafts uncomment the following line
%\usepackage[light,timestamp,first]{draftcopy}

% Comment out the following line TO MARK blank pages with the 
% text "This page intentionally left blank."
\newcommand{\markblankpages}{}

% Comment out the following line for the copy submitted to the library
\newcommand{\archivalpapernote}{}

% User defined commands
\input{user-defined}

\begin{document}

	%%
	%% Front matter
	%%
	\begin{frontmatter}

		\frontmatterheadings

		% Collect the dissertation information for the title page
		\input{metadata}
		% Generate the title page
		\maketitle

		\input{abstract}

		% Author declaration
		\makedeclaration

		% Preface
		\input{preface}

		% Acknowledgements
		\input{acknowledgements}

		% TOC, LOF, LOT
		{%
			\singlespacing%
			\tableofcontents%
			\listoffigures%
			% Do not include a list of tables if you have less
			% than 10 tables, as per SGS suggestion.
			%\listoftables
		   \clearpage%
		}%

   \end{frontmatter}

	%%
	%% Main matter
	%%
	\begin{mainmatter}

		\mainmatterheadings

		\input{chapter-introduction}
		\input{chapter-methods}
		\input{chapter-zonalwaves}
		\input{chapter-psa}
		\input{chapter-reproducibility}
		\input{chapter-conclusions}
								
	\end{mainmatter}

	%%
	%% Bibliography
	%%
	\addcontentsline{toc}{part}{Bibliography}		

	\bibliography{bib/references}
	
	%%
	%% Appendix
	%%
	%\begin{appendix}

	%	\input{appendix}

	%\end{appendix}


\end{document}
%... and of four years work! :-)