From 92d9abb433be4509e97e7d24fe06d68fd3ca7e9f Mon Sep 17 00:00:00 2001 From: Scott Henderson Date: Thu, 16 May 2024 12:29:14 -0700 Subject: [PATCH 1/4] update xarray and friends --- environment.yml | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) diff --git a/environment.yml b/environment.yml index 3584d99..2628943 100644 --- a/environment.yml +++ b/environment.yml @@ -52,6 +52,7 @@ dependencies: # Core scientific python stack - cython==0.29.32 # optimization, C API access + - flox~=0.9.7 # optimization, xarray operations - hypothesis==6.58.0 # needed by numpy testing tools - networkx==2.8.8 - numba~=0.58.1 # high-performance numerics @@ -62,7 +63,7 @@ dependencies: - scipy==1.9.3 - statsmodels==0.13.5 - sympy~=1.12 - - xarray>=2023.05.0 + - xarray>=2024.05.0 # Visualization packages - bokeh~=3.2.2 @@ -80,15 +81,16 @@ dependencies: - geopandas~=0.13.2 - pygmt~=0.10.0 - rasterio~=1.3 - - rioxarray~=0.14.1 - - xarray-datatree~=0.0.12 + - rioxarray~=0.15.5 + - xarray-datatree~=0.0.14 # File formats and file management, download, dataset caching - h5py~=3.8 - hdf5~=1.14 - - h5netcdf==1.1.0 + - h5netcdf~=1.3.0 - nco~=5.1.6 - pooch==1.6.0 + - zarr~=2.18 # Cloud access tools and libraries - awscli~=1.27.76 From fed01e54970292aead79aa51497b11f0fe5d58ea Mon Sep 17 00:00:00 2001 From: Scott Henderson Date: Fri, 17 May 2024 12:39:16 -0700 Subject: [PATCH 2/4] remove datatree --- environment.yml | 1 - 1 file changed, 1 deletion(-) diff --git a/environment.yml b/environment.yml index 2628943..bea7eda 100644 --- a/environment.yml +++ b/environment.yml @@ -82,7 +82,6 @@ dependencies: - pygmt~=0.10.0 - rasterio~=1.3 - rioxarray~=0.15.5 - - xarray-datatree~=0.0.14 # File formats and file management, download, dataset caching - h5py~=3.8 From db15c927ddc4e5cc699b75662f215292e34c03b4 Mon Sep 17 00:00:00 2001 From: Scott Henderson Date: Fri, 17 May 2024 12:52:36 -0700 Subject: [PATCH 3/4] upgrade scipy --- environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/environment.yml b/environment.yml index bea7eda..290e0df 100644 --- a/environment.yml +++ b/environment.yml @@ -60,7 +60,7 @@ dependencies: - pandas>=2.0.1,<3.0 - scikit-image==0.19.3 - scikit-learn>=1.2.2,<2.0.0 - - scipy==1.9.3 + - scipy>=1.10 - statsmodels==0.13.5 - sympy~=1.12 - xarray>=2024.05.0 From 59447a4752d854ca10bd60bbcd75ba20023388e3 Mon Sep 17 00:00:00 2001 From: actions-bot <58130806+actions-bot@users.noreply.github.com> Date: Fri, 17 May 2024 19:54:16 +0000 Subject: [PATCH 4/4] [condalock-command] autogenerated conda-lock files --- conda-linux-64.lock | 200 ++++++++++++++++++++++---------------------- 1 file changed, 98 insertions(+), 102 deletions(-) diff --git a/conda-linux-64.lock b/conda-linux-64.lock index 35bd51f..d8dd3f9 100644 --- a/conda-linux-64.lock +++ b/conda-linux-64.lock @@ -1,6 +1,6 @@ # Generated by conda-lock. # platform: linux-64 -# input_hash: 6772174c923c8e24535de0be16fb8fa256d3afe3d14c0d1f2339de2e7f357519 +# input_hash: 80bd1797e1ae1e9963cfebe89731d9dc9f812364c42b6b08efd77ec560f4ac78 @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda#2f4327a1cbe7f022401b236e915a5fef @@ -12,7 +12,7 @@ https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-h77eed37_2.co https://conda.anaconda.org/conda-forge/linux-64/gh-2.32.1-ha8f183a_0.conda#220ab331a2770ab9fbe7302751d6eafd https://conda.anaconda.org/conda-forge/linux-64/gshhg-gmt-2.3.7-ha770c72_1003.tar.bz2#64505e3a020e1927b453a0da59df2267 https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.40-h55db66e_0.conda#10569984e7db886e4f1abc2b47ad79a1 -https://conda.anaconda.org/conda-forge/linux-64/libboost-headers-1.84.0-ha770c72_2.conda#85d30a3fcc0f1cfc252776208af546a1 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