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workflow_annotations.yaml
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/
workflow_annotations.yaml
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nf-core/eager:
name: nf-core/eager
description: nf-core/eager is a bioinformatics best-practice analysis pipeline for NGS sequencing based ancient DNA (aDNA) data analysis. The pipeline uses Nextflow, a bioinformatics workflow tool. It pre-processes raw data from FASTQ inputs, or preprocessed BAM inputs. It can align reads and performs extensive general NGS and aDNA specific quality-control on the results. It comes with docker, singularity or conda containers making installation trivial and results highly reproducible.
license: MIT
home_url: https://github.com/nf-core/eager
manually_check: true
related_tools:
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- fastqc
- adapterremoval
- adapterremovalfixprefix
- bwa
- picard
- samtools
- dedup
- angsd
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- qualimap
- vcf2genome
- damageprofiler
- multiqc
- pmdtools
- bedtools
- sequencetools
- preseq
- fastp
- bamutil
- mtnucratio
- pysam
- python
- kraken2
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- multivcfanalyzer
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